PubMed:17549393 / 915-1072
Annnotations
LitCoin-entities
{"project":"LitCoin-entities","denotations":[{"id":"4138","span":{"begin":6,"end":14},"obj":"OrganismTaxon"},{"id":"4139","span":{"begin":57,"end":65},"obj":"SequenceVariant"},{"id":"4140","span":{"begin":79,"end":131},"obj":"SequenceVariant"},{"id":"4141","span":{"begin":139,"end":145},"obj":"SequenceVariant"}],"attributes":[{"id":"A21","pred":"db_id","subj":"4138","obj":"NCBITaxon:9606"},{"id":"A22","pred":"db_id","subj":"4139","obj":"c|SUB|C|201|A"},{"id":"A23","pred":"db_id","subj":"4140","obj":"p|SUB|Y|67|X"},{"id":"A24","pred":"db_id","subj":"4141","obj":"p|SUB|Y|67|X"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-sentences
{"project":"LitCoin-sentences","denotations":[{"id":"T10","span":{"begin":0,"end":157},"obj":"Sentence"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-entities-OrganismTaxon-PD
{"project":"LitCoin-entities-OrganismTaxon-PD","denotations":[{"id":"T2","span":{"begin":88,"end":93},"obj":"OrganismTaxon"},{"id":"T3","span":{"begin":132,"end":137},"obj":"OrganismTaxon"}],"attributes":[{"id":"A2","pred":"db_id","subj":"T2","obj":"NCBItxid:79338"},{"id":"A3","pred":"db_id","subj":"T3","obj":"NCBItxid:79338"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-SeqVar
{"project":"LitCoin-SeqVar","denotations":[{"id":"T2","span":{"begin":57,"end":65},"obj":"SequenceVariant"},{"id":"T3","span":{"begin":139,"end":145},"obj":"SequenceVariant"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-GeneOrGeneProduct-v0
{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T33","span":{"begin":0,"end":3},"obj":"GeneOrGeneProduct"},{"id":"T34","span":{"begin":39,"end":43},"obj":"GeneOrGeneProduct"},{"id":"T35","span":{"begin":79,"end":87},"obj":"GeneOrGeneProduct"},{"id":"T36","span":{"begin":97,"end":107},"obj":"GeneOrGeneProduct"},{"id":"T37","span":{"begin":127,"end":131},"obj":"GeneOrGeneProduct"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-GeneOrGeneProduct-v2
{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T18","span":{"begin":79,"end":87},"obj":"GeneOrGeneProduct"},{"id":"T19","span":{"begin":97,"end":107},"obj":"GeneOrGeneProduct"},{"id":"T20","span":{"begin":127,"end":131},"obj":"GeneOrGeneProduct"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-NCBITaxon-2
{"project":"LitCoin-NCBITaxon-2","denotations":[{"id":"T2","span":{"begin":6,"end":14},"obj":"OrganismTaxon"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-Chemical-MeSH-CHEBI
{"project":"LitCoin-Chemical-MeSH-CHEBI","denotations":[{"id":"T1","span":{"begin":79,"end":87},"obj":"ChemicalEntity"}],"attributes":[{"id":"A1","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_18186"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
LitCoin-training-merged
{"project":"LitCoin-training-merged","denotations":[{"id":"T1","span":{"begin":79,"end":87},"obj":"ChemicalEntity"},{"id":"T26449","span":{"begin":6,"end":14},"obj":"OrganismTaxon"},{"id":"T94395","span":{"begin":139,"end":145},"obj":"SequenceVariant"},{"id":"T38444","span":{"begin":57,"end":65},"obj":"SequenceVariant"}],"attributes":[{"id":"A1","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_18186"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}
tmVarCorpus
{"project":"tmVarCorpus","denotations":[{"id":"T2","span":{"begin":57,"end":65},"obj":"DNAMutation:c|SUB|C|201|A"},{"id":"T3","span":{"begin":139,"end":145},"obj":"ProteinMutation:p|SUB|Y|67|X"}],"text":"All 5 patients were heterozygous for a base substitution c.201C\u003eA changing the tyrosine codon at amino acid position 67 into a stop codon (p.Y67X) in exon 4."}