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PubMed:17549393 / 0-157 JSONTXT

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LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
4119 8-12 GeneOrGeneProduct denotes IRF6 NCBIGene:3664
4120 32-36 SequenceVariant denotes Y67X p|SUB|Y|67|X
4121 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome MESH:C536528
4122 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome MESH:C536528
4123 110-113 DiseaseOrPhenotypicFeature denotes VWS MESH:C536528

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-85 Sentence denotes A novel IRF6 nonsense mutation (Y67X) in a German family with Van der Woude syndrome.

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome 0019508
T2 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome 0019508

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 32-36 SequenceVariant denotes Y67X

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 2-7 GeneOrGeneProduct denotes novel
T2 8-12 GeneOrGeneProduct denotes IRF6
T3 22-30 GeneOrGeneProduct denotes mutation
T4 38-42 GeneOrGeneProduct denotes in a
T5 76-84 GeneOrGeneProduct denotes syndrome
T6 100-108 GeneOrGeneProduct denotes syndrome
T7 142-151 GeneOrGeneProduct denotes syndromic

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 2-7 GeneOrGeneProduct denotes novel
T2 8-12 GeneOrGeneProduct denotes IRF6
T3 76-84 GeneOrGeneProduct denotes syndrome
T4 100-108 GeneOrGeneProduct denotes syndrome

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T2 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T3 110-113 DiseaseOrPhenotypicFeature denotes VWS C536528
T4 142-151 DiseaseOrPhenotypicFeature denotes syndromic D013577

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome 0019508
T2 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome 0019508
T3 110-113 DiseaseOrPhenotypicFeature denotes VWS 0019508

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T2 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T3 110-113 DiseaseOrPhenotypicFeature denotes VWS C536528

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T2 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T3 110-113 DiseaseOrPhenotypicFeature denotes VWS C536528

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T92598 8-12 GeneOrGeneProduct denotes IRF6
T73165 110-113 DiseaseOrPhenotypicFeature denotes VWS C536528
T29454 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T89410 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome C536528
T61975 32-36 SequenceVariant denotes Y67X

DisGeNET

Id Subject Object Predicate Lexical cue
T0 8-12 gene:3664 denotes IRF6
T1 62-84 disease:C0175697 denotes Van der Woude syndrome
R1 T0 T1 associated_with IRF6,Van der Woude syndrome

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
17549393-0#8#12#gene3664 8-12 gene3664 denotes IRF6
17549393-0#62#84#diseaseC0175697 62-84 diseaseC0175697 denotes Van der Woude syndrome
8#12#gene366462#84#diseaseC0175697 17549393-0#8#12#gene3664 17549393-0#62#84#diseaseC0175697 associated_with IRF6,Van der Woude syndrome

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 32-36 ProteinMutation:p|SUB|Y|67|X denotes Y67X

biored-valid-deepseek-nr-ng

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 86-108 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T5 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-deepseek-nr-g

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 13-37 SequenceVariant denotes nonsense mutation (Y67X)
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-deepseek-r-ng

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-deepseek-r-g

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gemini-nr-ng

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 43-49 OrganismTaxon denotes German
T4 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T5 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gemini-r-g

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 13-30 SequenceVariant denotes nonsense mutation
T3 32-36 SequenceVariant denotes Y67X
T4 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T5 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gemini-r-ng

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 43-49 OrganismTaxon denotes German
T4 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T5 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gpt-nr-ng

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gpt-r-ng

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 13-30 SequenceVariant denotes nonsense mutation
T3 32-36 SequenceVariant denotes Y67X
T4 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T5 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gpt-r-g

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gpt-nr-g

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 31-37 SequenceVariant denotes (Y67X)
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 109-114 DiseaseOrPhenotypicFeature denotes (VWS)

biored-valid-gemini-nr-g

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 13-30 SequenceVariant denotes nonsense mutation
T3 32-36 SequenceVariant denotes Y67X
T4 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T5 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gpt-r-m

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-gemini-r-m

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 13-30 SequenceVariant denotes nonsense mutation
T3 32-36 SequenceVariant denotes Y67X
T4 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T5 110-113 DiseaseOrPhenotypicFeature denotes VWS

biored-valid-deepseek-r-m

Id Subject Object Predicate Lexical cue
T1 8-12 GeneOrGeneProduct denotes IRF6
T2 32-36 SequenceVariant denotes Y67X
T3 62-84 DiseaseOrPhenotypicFeature denotes Van der Woude syndrome
T4 110-113 DiseaseOrPhenotypicFeature denotes VWS