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PubMed:17427234 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-113 Sentence denotes Composite adrenal anaplastic neuroblastoma and virilizing adrenocortical tumor with germline TP53 R248W mutation.
TextSentencer_T2 114-150 Sentence denotes Composite tumors are extremely rare.
TextSentencer_T3 151-250 Sentence denotes Such tumors in adrenal glands are usually of neuroendocrine-neural type and occur mostly in adults.
TextSentencer_T4 251-286 Sentence denotes Their pathogenesis remains elusive.
TextSentencer_T5 287-435 Sentence denotes We report a patient with composite neuroblastoma (NB), adrenocortical tumor (ACT), and Li-Fraumeni syndrome (LFS) with germline TP53 R248W mutation.
TextSentencer_T6 436-567 Sentence denotes LFS predisposes to the development of leukemia, sarcomas, adrenocortical and breast carcinomas, brain tumors and, questionably, NB.
TextSentencer_T7 568-685 Sentence denotes A unique correlation between a single TP53 mutation (R337H) and ACT has been reported in southern Brazilian children.
TextSentencer_T8 686-792 Sentence denotes It remains unclear at this time whether a similar association of NB and R248W in patients with LFS exists.
T1 0-113 Sentence denotes Composite adrenal anaplastic neuroblastoma and virilizing adrenocortical tumor with germline TP53 R248W mutation.
T2 114-150 Sentence denotes Composite tumors are extremely rare.
T3 151-250 Sentence denotes Such tumors in adrenal glands are usually of neuroendocrine-neural type and occur mostly in adults.
T4 251-286 Sentence denotes Their pathogenesis remains elusive.
T5 287-435 Sentence denotes We report a patient with composite neuroblastoma (NB), adrenocortical tumor (ACT), and Li-Fraumeni syndrome (LFS) with germline TP53 R248W mutation.
T6 436-567 Sentence denotes LFS predisposes to the development of leukemia, sarcomas, adrenocortical and breast carcinomas, brain tumors and, questionably, NB.
T7 568-685 Sentence denotes A unique correlation between a single TP53 mutation (R337H) and ACT has been reported in southern Brazilian children.
T8 686-792 Sentence denotes It remains unclear at this time whether a similar association of NB and R248W in patients with LFS exists.

DisGeNET

Id Subject Object Predicate Lexical cue
T0 93-97 gene:7157 denotes TP53
T1 29-42 disease:C0027819 denotes neuroblastoma
T2 93-97 gene:7157 denotes TP53
T3 29-42 disease:C0700095 denotes neuroblastoma
T4 93-97 gene:7157 denotes TP53
T5 58-78 disease:C0001618 denotes adrenocortical tumor
T6 415-419 gene:7157 denotes TP53
T7 322-335 disease:C0700095 denotes neuroblastoma
T8 415-419 gene:7157 denotes TP53
T9 396-399 disease:C0085390 denotes LFS
T10 415-419 gene:7157 denotes TP53
T11 374-394 disease:C0085390 denotes Li-Fraumeni syndrome
T12 415-419 gene:7157 denotes TP53
T13 322-335 disease:C0027819 denotes neuroblastoma
T14 606-610 gene:7157 denotes TP53
T15 632-635 disease:C0001618 denotes ACT
R1 T0 T1 associated_with TP53,neuroblastoma
R2 T2 T3 associated_with TP53,neuroblastoma
R3 T4 T5 associated_with TP53,adrenocortical tumor
R4 T6 T7 associated_with TP53,neuroblastoma
R5 T8 T9 associated_with TP53,LFS
R6 T10 T11 associated_with TP53,Li-Fraumeni syndrome
R7 T12 T13 associated_with TP53,neuroblastoma
R8 T14 T15 associated_with TP53,ACT

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 124-130 HP_0002664 denotes tumors
T1 124-130 HP_0002664 denotes tumors
T2 156-162 HP_0002664 denotes tumors
T3 156-180 HP_0100631 denotes tumors in adrenal glands
T4 322-335 HP_0003006 denotes neuroblastoma
T5 357-362 HP_0002664 denotes tumor
T6 474-482 HP_0001909 denotes leukemia
T7 484-492 HP_0100242 denotes sarcomas
T8 494-530 HP_0006744 denotes adrenocortical and breast carcinomas
T9 513-530 HP_0003002 denotes breast carcinomas
T10 538-544 HP_0002664 denotes tumors
T2 156-162 HP_0002664 denotes tumors
T3 156-180 HP_0100631 denotes tumors in adrenal glands
T4 322-335 HP_0003006 denotes neuroblastoma
T5 357-362 HP_0002664 denotes tumor
T6 474-482 HP_0001909 denotes leukemia
T7 484-492 HP_0100242 denotes sarcomas
T8 494-530 HP_0006744 denotes adrenocortical and breast carcinomas
T9 513-530 HP_0003002 denotes breast carcinomas
T10 538-544 HP_0002664 denotes tumors

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
17427234-0#98#103#geners121912651 98-103 geners121912651 denotes R248W
17427234-0#29#42#diseaseC0027819 29-42 diseaseC0027819 denotes neuroblastoma
17427234-0#29#42#diseaseC0700095 29-42 diseaseC0700095 denotes neuroblastoma
17427234-0#58#78#diseaseC0001618 58-78 diseaseC0001618 denotes adrenocortical tumor
17427234-4#53#58#geners121912664 621-626 geners121912664 denotes R337H
17427234-4#64#67#diseaseC0001618 632-635 diseaseC0001618 denotes ACT
17427234-5#72#77#geners121912651 758-763 geners121912651 denotes R248W
17427234-5#95#98#diseaseC0085390 781-784 diseaseC0085390 denotes LFS
98#103#geners12191265129#42#diseaseC0027819 17427234-0#98#103#geners121912651 17427234-0#29#42#diseaseC0027819 associated_with R248W,neuroblastoma
98#103#geners12191265129#42#diseaseC0700095 17427234-0#98#103#geners121912651 17427234-0#29#42#diseaseC0700095 associated_with R248W,neuroblastoma
98#103#geners12191265158#78#diseaseC0001618 17427234-0#98#103#geners121912651 17427234-0#58#78#diseaseC0001618 associated_with R248W,adrenocortical tumor
53#58#geners12191266464#67#diseaseC0001618 17427234-4#53#58#geners121912664 17427234-4#64#67#diseaseC0001618 associated_with R337H,ACT
72#77#geners12191265195#98#diseaseC0085390 17427234-5#72#77#geners121912651 17427234-5#95#98#diseaseC0085390 associated_with R248W,LFS

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
17427234-0#93#97#gene7157 93-97 gene7157 denotes TP53
17427234-0#93#97#gene7157 93-97 gene7157 denotes TP53
17427234-0#29#42#diseaseC0027819 29-42 diseaseC0027819 denotes neuroblastoma
17427234-0#29#42#diseaseC0700095 29-42 diseaseC0700095 denotes neuroblastoma
17427234-0#58#78#diseaseC0001618 58-78 diseaseC0001618 denotes adrenocortical tumor
17427234-2#128#132#gene7157 415-419 gene7157 denotes TP53
17427234-2#87#107#diseaseC0085390 374-394 diseaseC0085390 denotes Li-Fraumeni syndrome
17427234-2#109#112#diseaseC0085390 396-399 diseaseC0085390 denotes LFS
93#97#gene715729#42#diseaseC0027819 17427234-0#93#97#gene7157 17427234-0#29#42#diseaseC0027819 associated_with TP53,neuroblastoma
93#97#gene715729#42#diseaseC0700095 17427234-0#93#97#gene7157 17427234-0#29#42#diseaseC0700095 associated_with TP53,neuroblastoma
93#97#gene715758#78#diseaseC0001618 17427234-0#93#97#gene7157 17427234-0#58#78#diseaseC0001618 associated_with TP53,adrenocortical tumor
93#97#gene715729#42#diseaseC0027819 17427234-0#93#97#gene7157 17427234-0#29#42#diseaseC0027819 associated_with TP53,neuroblastoma
93#97#gene715729#42#diseaseC0700095 17427234-0#93#97#gene7157 17427234-0#29#42#diseaseC0700095 associated_with TP53,neuroblastoma
93#97#gene715758#78#diseaseC0001618 17427234-0#93#97#gene7157 17427234-0#58#78#diseaseC0001618 associated_with TP53,adrenocortical tumor
128#132#gene715787#107#diseaseC0085390 17427234-2#128#132#gene7157 17427234-2#87#107#diseaseC0085390 associated_with TP53,Li-Fraumeni syndrome
128#132#gene7157109#112#diseaseC0085390 17427234-2#128#132#gene7157 17427234-2#109#112#diseaseC0085390 associated_with TP53,LFS

PubCasesHPO

Id Subject Object Predicate Lexical cue
TI1 29-42 HP:0003006 denotes neuroblastoma
AB1 322-335 HP:0003006 denotes neuroblastoma
AB2 474-482 HP:0001909 denotes leukemia
AB3 484-492 HP:0100242 denotes sarcomas
AB4 513-530 HP:0003002 denotes breast carcinomas

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE_T1 166-180 http://purl.obolibrary.org/obo/UBERON_0002369 denotes adrenal glands
PD-UBERON-AE_T2 174-180 http://purl.obolibrary.org/obo/UBERON_0002530 denotes glands
PD-UBERON-AE_T3 513-519 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE_T4 532-537 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain

PubCasesORDO

Id Subject Object Predicate Lexical cue
TI1 29-42 ORDO:635 denotes neuroblastoma
AB1 322-335 ORDO:635 denotes neuroblastoma
AB2 374-394 ORDO:524 denotes Li-Fraumeni syndrome

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 532-537 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
PD-UBERON-AE-B_T2 174-180 http://purl.obolibrary.org/obo/UBERON_0002530 denotes glands
PD-UBERON-AE-B_T3 513-519 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast
PD-UBERON-AE-B_T4 166-180 http://purl.obolibrary.org/obo/UBERON_0002369 denotes adrenal glands