PubMed:17391797
Annnotations
TEST-DiseaseOrPhenotypicFeature
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T1 | 121-125 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T2 | 216-244 | DiseaseOrPhenotypicFeature | denotes | nonalcoholic steatohepatitis | D065626 |
| T3 | 246-250 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T4 | 599-603 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T5 | 663-667 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T6 | 883-887 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T7 | 1005-1009 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T8 | 1062-1066 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T9 | 1135-1140 | DiseaseOrPhenotypicFeature | denotes | obese | DISEASE |
| T10 | 1372-1376 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T11 | 1420-1424 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
| T12 | 1442-1447 | DiseaseOrPhenotypicFeature | denotes | obese | DISEASE |
| T13 | 1514-1518 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
TEST-ChemicalEntity
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 4-48 | ChemicalEntity | denotes | phosphatidylethanolamine N-methyltransferase | D050918 |
| T2 | 332-376 | ChemicalEntity | denotes | phosphatidylethanolamine N-methyltransferase | D050918 |
| T3 | 378-382 | ChemicalEntity | denotes | PEMT | D050918 |
| T4 | 417-441 | ChemicalEntity | denotes | phosphatidylethanolamine | C483858|http://purl.obolibrary.org/obo/CHEBI_16038 |
| T6 | 445-464 | ChemicalEntity | denotes | phosphatidylcholine | D010713|http://purl.obolibrary.org/obo/CHEBI_64482 |
| T8 | 561-565 | ChemicalEntity | denotes | PEMT | D050918 |
| T9 | 838-842 | ChemicalEntity | denotes | PEMT | D050918 |
| T10 | 1259-1263 | ChemicalEntity | denotes | PEMT | D050918 |
| T11 | 1299-1303 | ChemicalEntity | denotes | PEMT | D050918 |
| T12 | 1482-1486 | ChemicalEntity | denotes | PEMT | D050918 |
TEST-OrganismTaxon
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 635-643 | OrganismTaxon | denotes | patients |
| T2 | 888-896 | OrganismTaxon | denotes | patients |
| T3 | 1010-1018 | OrganismTaxon | denotes | patients |
| T4 | 1067-1075 | OrganismTaxon | denotes | patients |
| T5 | 1141-1149 | OrganismTaxon | denotes | patients |
| T6 | 1425-1433 | OrganismTaxon | denotes | patients |
Test-SequenceVariant
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 54-59 | SequenceVariant | denotes | V175M |
| T2 | 306-315 | SequenceVariant | denotes | Val175Met |
| T3 | 531-540 | SequenceVariant | denotes | Val175Met |
| T4 | 806-815 | SequenceVariant | denotes | Val175Met |
| T5 | 951-960 | SequenceVariant | denotes | Val175Met |
| T6 | 1208-1217 | SequenceVariant | denotes | Val175Met |
| T7 | 1278-1287 | SequenceVariant | denotes | Val175Met |
| T8 | 1461-1470 | SequenceVariant | denotes | Val175Met |
Test-GeneOrGeneProduct
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 4-48 | GeneOrGeneProduct | denotes | phosphatidylethanolamine N-methyltransferase |
| T2 | 332-376 | GeneOrGeneProduct | denotes | phosphatidylethanolamine N-methyltransferase |
| T3 | 378-382 | GeneOrGeneProduct | denotes | PEMT |
| T4 | 417-441 | GeneOrGeneProduct | denotes | phosphatidylethanolamine |
| T5 | 445-464 | GeneOrGeneProduct | denotes | phosphatidylcholine |
| T6 | 561-565 | GeneOrGeneProduct | denotes | PEMT |
| T7 | 838-842 | GeneOrGeneProduct | denotes | PEMT |
| T8 | 1259-1263 | GeneOrGeneProduct | denotes | PEMT |
| T9 | 1299-1303 | GeneOrGeneProduct | denotes | PEMT |
| T10 | 1482-1486 | GeneOrGeneProduct | denotes | PEMT |
Test-merged-2
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T92178 | 54-59 | SequenceVariant | denotes | V175M | ||
| T80384 | 306-315 | SequenceVariant | denotes | Val175Met | ||
| T63808 | 531-540 | SequenceVariant | denotes | Val175Met | ||
| T31129 | 806-815 | SequenceVariant | denotes | Val175Met | ||
| T42884 | 951-960 | SequenceVariant | denotes | Val175Met | ||
| T3132 | 1208-1217 | SequenceVariant | denotes | Val175Met | ||
| T10091 | 1278-1287 | SequenceVariant | denotes | Val175Met | ||
| T94115 | 1461-1470 | SequenceVariant | denotes | Val175Met | ||
| T6716 | 4-48 | ChemicalEntity | denotes | phosphatidylethanolamine N-methyltransferase | D050918 | |
| T563 | 332-376 | ChemicalEntity | denotes | phosphatidylethanolamine N-methyltransferase | D050918 | |
| T17622 | 378-382 | ChemicalEntity | denotes | PEMT | D050918 | |
| T30554 | 417-441 | ChemicalEntity | denotes | phosphatidylethanolamine | C483858|http://purl.obolibrary.org/obo/CHEBI_16038 | |
| T87131 | 445-464 | ChemicalEntity | denotes | phosphatidylcholine | D010713|http://purl.obolibrary.org/obo/CHEBI_64482 | |
| T89112 | 561-565 | ChemicalEntity | denotes | PEMT | D050918 | |
| T10843 | 838-842 | ChemicalEntity | denotes | PEMT | D050918 | |
| T74175 | 1259-1263 | ChemicalEntity | denotes | PEMT | D050918 | |
| T76041 | 1299-1303 | ChemicalEntity | denotes | PEMT | D050918 | |
| T56537 | 1482-1486 | ChemicalEntity | denotes | PEMT | D050918 | |
| T14993 | 4-48 | GeneOrGeneProduct | denotes | phosphatidylethanolamine N-methyltransferase | ||
| T8687 | 332-376 | GeneOrGeneProduct | denotes | phosphatidylethanolamine N-methyltransferase | ||
| T36108 | 378-382 | GeneOrGeneProduct | denotes | PEMT | ||
| T13751 | 417-441 | GeneOrGeneProduct | denotes | phosphatidylethanolamine | ||
| T77480 | 445-464 | GeneOrGeneProduct | denotes | phosphatidylcholine | ||
| T23967 | 561-565 | GeneOrGeneProduct | denotes | PEMT | ||
| T10540 | 838-842 | GeneOrGeneProduct | denotes | PEMT | ||
| T250 | 1259-1263 | GeneOrGeneProduct | denotes | PEMT | ||
| T34997 | 1299-1303 | GeneOrGeneProduct | denotes | PEMT | ||
| T98177 | 1482-1486 | GeneOrGeneProduct | denotes | PEMT | ||
| T49664 | 635-643 | OrganismTaxon | denotes | patients | ||
| T85854 | 888-896 | OrganismTaxon | denotes | patients | ||
| T3882 | 1010-1018 | OrganismTaxon | denotes | patients | ||
| T41710 | 1067-1075 | OrganismTaxon | denotes | patients | ||
| T85902 | 1141-1149 | OrganismTaxon | denotes | patients | ||
| T95853 | 1425-1433 | OrganismTaxon | denotes | patients | ||
| T1 | 121-125 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T2 | 216-244 | DiseaseOrPhenotypicFeature | denotes | nonalcoholic steatohepatitis | D065626 | |
| T3 | 246-250 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T4 | 599-603 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T5 | 663-667 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T6 | 883-887 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T7 | 1005-1009 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T8 | 1062-1066 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T9 | 1135-1140 | DiseaseOrPhenotypicFeature | denotes | obese | DISEASE | |
| T10 | 1372-1376 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T11 | 1420-1424 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 | |
| T12 | 1442-1447 | DiseaseOrPhenotypicFeature | denotes | obese | DISEASE | |
| T13 | 1514-1518 | DiseaseOrPhenotypicFeature | denotes | NASH | D065626 |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 561-565 | gene:10400 | denotes | PEMT |
| T1 | 599-603 | disease:C3241937 | denotes | NASH |
| T2 | 1299-1303 | gene:10400 | denotes | PEMT |
| T3 | 1514-1518 | disease:C3241937 | denotes | NASH |
| T4 | 1299-1303 | gene:10400 | denotes | PEMT |
| T5 | 1420-1424 | disease:C3241937 | denotes | NASH |
| T6 | 1299-1303 | gene:10400 | denotes | PEMT |
| T7 | 1372-1376 | disease:C3241937 | denotes | NASH |
| T8 | 1482-1486 | gene:10400 | denotes | PEMT |
| T9 | 1372-1376 | disease:C3241937 | denotes | NASH |
| T10 | 1482-1486 | gene:10400 | denotes | PEMT |
| T11 | 1442-1447 | disease:C0028754 | denotes | obese |
| T12 | 1482-1486 | gene:10400 | denotes | PEMT |
| T13 | 1514-1518 | disease:C3241937 | denotes | NASH |
| R1 | T0 | T1 | associated_with | PEMT,NASH |
| R2 | T2 | T3 | associated_with | PEMT,NASH |
| R3 | T4 | T5 | associated_with | PEMT,NASH |
| R4 | T6 | T7 | associated_with | PEMT,NASH |
| R5 | T8 | T9 | associated_with | PEMT,NASH |
| R6 | T10 | T11 | associated_with | PEMT,obese |
| R7 | T12 | T13 | associated_with | PEMT,NASH |
DisGeNET5_variant_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 17391797-0#54#59#geners7946 | 54-59 | geners7946 | denotes | V175M |
| 17391797-0#121#125#diseaseC3241937 | 121-125 | diseaseC3241937 | denotes | NASH |
| 17391797-7#183#192#geners7946 | 1461-1470 | geners7946 | denotes | Val175Met |
| 17391797-7#0#9#geners7946 | 1278-1287 | geners7946 | denotes | Val175Met |
| 17391797-7#164#169#diseaseC0028754 | 1442-1447 | diseaseC0028754 | denotes | obese |
| 54#59#geners7946121#125#diseaseC3241937 | 17391797-0#54#59#geners7946 | 17391797-0#121#125#diseaseC3241937 | associated_with | V175M,NASH |
| 183#192#geners7946164#169#diseaseC0028754 | 17391797-7#183#192#geners7946 | 17391797-7#164#169#diseaseC0028754 | associated_with | Val175Met,obese |
| 0#9#geners7946164#169#diseaseC0028754 | 17391797-7#0#9#geners7946 | 17391797-7#164#169#diseaseC0028754 | associated_with | Val175Met,obese |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 17391797-0#4#48#gene10400 | 4-48 | gene10400 | denotes | phosphatidylethanolamine N-methyltransferase |
| 17391797-0#121#125#diseaseC3241937 | 121-125 | diseaseC3241937 | denotes | NASH |
| 17391797-7#21#25#gene10400 | 1299-1303 | gene10400 | denotes | PEMT |
| 17391797-7#204#208#gene10400 | 1482-1486 | gene10400 | denotes | PEMT |
| 17391797-7#164#169#diseaseC0028754 | 1442-1447 | diseaseC0028754 | denotes | obese |
| 4#48#gene10400121#125#diseaseC3241937 | 17391797-0#4#48#gene10400 | 17391797-0#121#125#diseaseC3241937 | associated_with | phosphatidylethanolamine N-methyltransferase,NASH |
| 21#25#gene10400164#169#diseaseC0028754 | 17391797-7#21#25#gene10400 | 17391797-7#164#169#diseaseC0028754 | associated_with | PEMT,obese |
| 204#208#gene10400164#169#diseaseC0028754 | 17391797-7#204#208#gene10400 | 17391797-7#164#169#diseaseC0028754 | associated_with | PEMT,obese |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 54-59 | ProteinMutation:p|SUB|V|175|M | denotes | V175M |
| T2 | 306-315 | ProteinMutation:p|SUB|V|175|M | denotes | Val175Met |
| T3 | 531-540 | ProteinMutation:p|SUB|V|175|M | denotes | Val175Met |
| T4 | 806-815 | ProteinMutation:p|SUB|V|175|M | denotes | Val175Met |
| T5 | 951-960 | ProteinMutation:p|SUB|V|175|M | denotes | Val175Met |
| T6 | 1208-1217 | ProteinMutation:p|SUB|V|175|M | denotes | Val175Met |
| T7 | 1278-1287 | ProteinMutation:p|SUB|V|175|M | denotes | Val175Met |
| T8 | 1461-1470 | ProteinMutation:p|SUB|V|175|M | denotes | Val175Met |