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OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 75-83 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T2 185-218 http://identifiers.org/oryzabase.gene/19544 denotes N-ethylmaleimide-sensitive factor
T3 417-425 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T4 493-501 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T5 628-636 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T6 854-862 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T7 1045-1053 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T8 1140-1142 http://identifiers.org/oryzabase.gene/319 denotes RT
T9 1169-1177 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T10 1326-1334 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T88865 75-83 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T26746 185-218 http://identifiers.org/ricegap/LOC_Os05g44310 denotes N-ethylmaleimide-sensitive factor
T29895 417-425 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T41236 493-501 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T75273 628-636 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T86887 854-862 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T78925 1045-1053 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T31062 1169-1177 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T4255 1279-1285 http://identifiers.org/ricegap/LOC_Os04g52479 denotes spikes
T90544 1300-1306 http://identifiers.org/ricegap/LOC_Os04g52479 denotes spikes
T11 1326-1334 http://identifiers.org/ricegap/LOC_Os02g24080 denotes OsSNAP32
T87107 75-83 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T30699 185-218 http://identifiers.org/rapdb.locus/Os05g0519400 denotes N-ethylmaleimide-sensitive factor
T32971 417-425 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T41613 493-501 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T56676 628-636 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T19075 854-862 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T81577 1045-1053 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T80093 1169-1177 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T46967 1279-1285 http://identifiers.org/rapdb.locus/Os04g0615000 denotes spikes
T99232 1300-1306 http://identifiers.org/rapdb.locus/Os04g0615000 denotes spikes
T67538 1326-1334 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T11747 75-83 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32
T65998 185-218 http://identifiers.org/uniprot/Q65X08 denotes N-ethylmaleimide-sensitive factor
T80402 185-218 http://identifiers.org/uniprot/Q40495 denotes N-ethylmaleimide-sensitive factor
T8975 417-425 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32
T45408 493-501 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32
T53150 628-636 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32
T61464 854-862 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32
T72047 1045-1053 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32
T76344 1169-1177 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32
T47248 1326-1334 http://identifiers.org/uniprot/Q5EEP3 denotes OsSNAP32

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 720-749 cand:PO:0025138-fused collective tepal structure denotes Qb-SNARE and Qc-SNARE domains
M_1 720-749 cand:PO:0025322-hydathode pore denotes Qb-SNARE and Qc-SNARE domains
M_2 720-749 cand:PPO:0002029-open floral structure presence denotes Qb-SNARE and Qc-SNARE domains
M_3 720-749 cand:PO:0025137-fused tepal denotes Qb-SNARE and Qc-SNARE domains
M_4 720-749 cand:TO:0000096-ratooning ability denotes Qb-SNARE and Qc-SNARE domains
M_5 720-749 cand:PPO:0002626-open floral structures absent denotes Qb-SNARE and Qc-SNARE domains
M_6 720-749 cand:PECO:0007393-sub-sahara region denotes Qb-SNARE and Qc-SNARE domains
M_7 720-749 cand:TO:0000418-bakanae disease resistance denotes Qb-SNARE and Qc-SNARE domains
M_8 720-749 cand:WTO:0000127-bread making quality denotes Qb-SNARE and Qc-SNARE domains
M_9 720-749 cand:funRiceGene:477-super apical dormant denotes Qb-SNARE and Qc-SNARE domains
M_10 720-749 cand:WTO:0000181-presence of black points denotes Qb-SNARE and Qc-SNARE domains
M_11 628-636 GeneID:RAPID:Os02g0437200MSUID:LOC_Os02g24080 denotes OsSNAP32
T79029 1648-1675 xzyao:14054 denotes biotic and abiotic stresses
T29111 93-105 xzyao:1553 denotes Oryza sativa
T79876 1413-1428 xzyao:7261 denotes low temperature
T16577 1290-1299 funRiceGene:504 denotes flowering
T4205 1072-1087 funRiceGene:329, xzyao:23356 denotes plasma membrane
T11053 1467-1485 xzyao:33703 denotes Magnaporthe grisea
T26728 1659-1675 xzyao:10867 denotes abiotic stresses
T27661 1460-1465 funRiceGene:223 denotes blast
T50187 1008-1029 xzyao:22985 denotes onion epidermal cells
T33904 1417-1428 funRiceGene:161 denotes temperature
T72681 327-343 xzyao:42798 denotes eukaryotic cells
T93848 1371-1380 funRiceGene:507 denotes seedlings
M_12 1122-1152 xzyao:25397 denotes Semi-quantitative RT-PCR assay
M_13 1014-1029 xzyao:13403 denotes epidermal cells
M_14 686-696 xzyao:10364 denotes amino acid
M_15 926-936 xzyao:10364 denotes amino acid
M_16 1455-1465 xzyao:29995 denotes rice blast
M_17 888-896 hunflair:NA:Gene denotes HvSNAP34
M_18 185-201 hunflair:NA:Chemical denotes N-ethylmaleimide
M_19 1467-1485 hunflair:NA:Species denotes Magnaporthe grisea
M_20 1008-1013 hunflair:NA:Species denotes onion
M_21 686-696 hunflair:NA:Chemical denotes amino acid
M_22 926-936 hunflair:NA:Chemical denotes amino acid
M_23 177-247 hunflair:NA:Gene denotes soluble N-ethylmaleimide-sensitive factor attachment protein receptors
M_24 93-105 hunflair:NA:Species denotes Oryza sativa
M_25 965-971 hunflair:NA:Species denotes barley
M_26 901-909 hunflair:NA:Gene denotes HvSNAP28
M_27 1400-1407 hunflair:NA:Chemical denotes PEG6000
M_28 75-83 hunflair:NA:Gene denotes OsSNAP32
M_29 417-425 hunflair:NA:Gene denotes OsSNAP32
M_30 493-501 hunflair:NA:Gene denotes OsSNAP32
M_31 628-636 hunflair:NA:Gene denotes OsSNAP32
M_32 854-862 hunflair:NA:Gene denotes OsSNAP32
M_33 1045-1053 hunflair:NA:Gene denotes OsSNAP32
M_34 1169-1177 hunflair:NA:Gene denotes OsSNAP32
M_35 1326-1334 hunflair:NA:Gene denotes OsSNAP32
M_36 50-61 hunflair:NA:Gene denotes SNAP25-type
M_37 115-126 hunflair:NA:Gene denotes SNAP25-type
M_38 1100-1111 hunflair:NA:Gene denotes SNAP25-type
M_39 1592-1603 hunflair:NA:Gene denotes SNAP25-type
M_40 87-91 hunflair:NA:Species denotes rice
M_41 618-622 hunflair:NA:Species denotes rice
M_42 1239-1243 hunflair:NA:Species denotes rice
M_43 1366-1370 hunflair:NA:Species denotes rice
M_44 1455-1459 hunflair:NA:Species denotes rice
M_45 1630-1634 hunflair:NA:Species denotes rice
M_46 1394-1398 hunflair:NA:Chemical denotes H2O2
M_47 185-186 pubtator:MESH:D009584:Chemical denotes N
M_48 757-758 pubtator:MESH:D009584:Chemical denotes N
M_49 1008-1013 pubtator:4679:Species denotes onion
M_50 764-765 pubtator:MESH:D002244:Chemical denotes C
M_51 185-201 pubtator:MESH:D005033:Chemical denotes N-ethylmaleimide
M_52 93-107 pubtator:4530:Species denotes Oryza sativa L
M_53 87-91 pubtator:4530:Species denotes rice
M_54 618-622 pubtator:4530:Species denotes rice
M_55 1239-1243 pubtator:4530:Species denotes rice
M_56 1366-1370 pubtator:4530:Species denotes rice
M_57 1455-1459 pubtator:4530:Species denotes rice
M_58 1630-1634 pubtator:4530:Species denotes rice
M_59 1467-1485 pubtator:148305:Species denotes Magnaporthe grisea
M_60 1400-1407 pubtator:MESH:D011092:Chemical denotes PEG6000
M_61 965-971 pubtator:4513:Species denotes barley
M_62 1394-1398 pubtator:MESH:D014867:Chemical denotes H2O2

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 1371-1380 funRiceGene:507 denotes seedlings
M_1 1417-1428 funRiceGene:161 denotes temperature
M_2 1290-1299 funRiceGene:504 denotes flowering
M_3 1479-1492 xzyao:4396 denotes grisea strain
M_4 1460-1465 funRiceGene:223 denotes blast
M_5 1400-1407 hunflair:NA:Chemical denotes PEG6000
M_6 1394-1398 hunflair:NA:Chemical denotes H2O2
M_7 177-247 hunflair:NA:Gene denotes soluble N-ethylmaleimide-sensitive factor attachment protein receptors
M_8 965-971 hunflair:NA:Species denotes barley
M_9 93-105 hunflair:NA:Species denotes Oryza sativa
M_10 185-201 hunflair:NA:Chemical denotes N-ethylmaleimide
M_11 686-696 hunflair:NA:Chemical denotes amino acid
M_12 926-936 hunflair:NA:Chemical denotes amino acid
M_13 87-91 hunflair:NA:Species denotes rice
M_14 618-622 hunflair:NA:Species denotes rice
M_15 1239-1243 hunflair:NA:Species denotes rice
M_16 1366-1370 hunflair:NA:Species denotes rice
M_17 1455-1459 hunflair:NA:Species denotes rice
M_18 1630-1634 hunflair:NA:Species denotes rice
M_19 1467-1485 hunflair:NA:Species denotes Magnaporthe grisea
M_20 888-896 hunflair:NA:Gene denotes HvSNAP34
M_21 75-83 hunflair:NA:Gene denotes OsSNAP32
M_22 417-425 hunflair:NA:Gene denotes OsSNAP32
M_23 493-501 hunflair:NA:Gene denotes OsSNAP32
M_24 628-636 hunflair:NA:Gene denotes OsSNAP32
M_25 854-862 hunflair:NA:Gene denotes OsSNAP32
M_26 1045-1053 hunflair:NA:Gene denotes OsSNAP32
M_27 1169-1177 hunflair:NA:Gene denotes OsSNAP32
M_28 1326-1334 hunflair:NA:Gene denotes OsSNAP32
M_29 1008-1013 hunflair:NA:Species denotes onion
M_30 901-909 hunflair:NA:Gene denotes HvSNAP28
M_31 50-61 hunflair:NA:Gene denotes SNAP25-type
M_32 115-126 hunflair:NA:Gene denotes SNAP25-type
M_33 1100-1111 hunflair:NA:Gene denotes SNAP25-type
M_34 1592-1603 hunflair:NA:Gene denotes SNAP25-type
M_35 1394-1398 pubtator:MESH:D014867:Chemical denotes H2O2
M_36 1467-1485 pubtator:148305:Species denotes Magnaporthe grisea
M_37 185-201 pubtator:MESH:D005033:Chemical denotes N-ethylmaleimide
M_38 965-971 pubtator:4513:Species denotes barley
M_39 1008-1013 pubtator:4679:Species denotes onion
M_40 185-186 pubtator:MESH:D009584:Chemical denotes N
M_41 757-758 pubtator:MESH:D009584:Chemical denotes N
M_42 1400-1407 pubtator:MESH:D011092:Chemical denotes PEG6000
M_43 87-91 pubtator:4530:Species denotes rice
M_44 618-622 pubtator:4530:Species denotes rice
M_45 1239-1243 pubtator:4530:Species denotes rice
M_46 1366-1370 pubtator:4530:Species denotes rice
M_47 1455-1459 pubtator:4530:Species denotes rice
M_48 1630-1634 pubtator:4530:Species denotes rice
M_49 764-765 pubtator:MESH:D002244:Chemical denotes C
M_50 93-107 pubtator:4530:Species denotes Oryza sativa L

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 185-218 http://identifiers.org/oryzabase.gene/19544 denotes N-ethylmaleimide-sensitive factor
T2 1498-1499 http://identifiers.org/oryzabase.gene/11216 denotes 1

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 75-83 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T2 417-425 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T3 493-501 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T4 628-636 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T5 854-862 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T6 1045-1053 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T7 1140-1142 http://identifiers.org/oryzabase.gene/319 denotes RT
T8 1169-1177 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T9 1326-1334 http://identifiers.org/oryzabase.gene/14681 denotes OsSNAP32
T79870 75-83 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T14060 417-425 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T27391 493-501 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T3896 628-636 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T66169 854-862 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T97255 1045-1053 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T24184 1169-1177 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32
T66644 1326-1334 http://identifiers.org/rapdb.locus/Os02g0437200 denotes OsSNAP32

OryzaGP

Id Subject Object Predicate Lexical cue
T1 75-83 gene denotes OsSNAP32
T2 417-425 gene denotes OsSNAP32
T3 493-501 gene denotes OsSNAP32
T4 854-862 gene denotes OsSNAP32
T5 1045-1053 gene denotes OsSNAP32
T6 1169-1177 gene denotes OsSNAP32
T7 1326-1334 gene denotes OsSNAP32

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-110 Sentence denotes Molecular cloning and characterization of a novel SNAP25-type protein gene OsSNAP32 in rice (Oryza sativa L.).
T2 111-344 Sentence denotes The SNAP25-type proteins belong to the superfamily of the SNAREs (soluble N-ethylmaleimide-sensitive factor attachment protein receptors), and function as important components of the vesical trafficking machinery in eukaryotic cells.
T3 345-488 Sentence denotes In this paper, we report the cloning and expression characterization of OsSNAP32 gene, and the subcellular localization of its encoded protein.
T4 489-623 Sentence denotes The OsSNAP32 gene contains five exons and four introns, and is located between RFLP markers C12276S and S1917 on chromosome 2 in rice.
T5 624-789 Sentence denotes The OsSNAP32 has a molecular weight of 31.3 kD, comprises 283 amino acid residues, and contains Qb-SNARE and Qc-SNARE domains in the N- and C-terminal, respectively.
T6 790-972 Sentence denotes Multiple sequence alignment of the SNARE domains indicates that OsSNAP32 protein is homologous to HvSNAP34 and HvSNAP28 (63% and 55% of amino acid identity respectively) from barley.
T7 973-1121 Sentence denotes The transient expression method in onion epidermal cells, revealed that OsSNAP32 is located in the plasma membrane, like other SNAP25-type proteins.
T8 1122-1307 Sentence denotes Semi-quantitative RT-PCR assay showed that the OsSNAP32 is highly expressed in leaves and culms, and low in roots of rice, while hardly detected in immature spikes and flowering spikes.
T9 1308-1501 Sentence denotes The expression of OsSNAP32 was significantly activated in rice seedlings treated with H2O2, PEG6000, and low temperature or after inoculation with rice blast (Magnaporthe grisea strain Hoku 1).
T10 1502-1676 Sentence denotes The results suggest that this gene belongs to a novel member of this gene family encoding SNAP25-type proteins, involved in the rice responses to biotic and abiotic stresses.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-110 Sentence denotes Molecular cloning and characterization of a novel SNAP25-type protein gene OsSNAP32 in rice (Oryza sativa L.).
T2 111-344 Sentence denotes The SNAP25-type proteins belong to the superfamily of the SNAREs (soluble N-ethylmaleimide-sensitive factor attachment protein receptors), and function as important components of the vesical trafficking machinery in eukaryotic cells.
T3 345-488 Sentence denotes In this paper, we report the cloning and expression characterization of OsSNAP32 gene, and the subcellular localization of its encoded protein.
T4 489-623 Sentence denotes The OsSNAP32 gene contains five exons and four introns, and is located between RFLP markers C12276S and S1917 on chromosome 2 in rice.
T5 624-789 Sentence denotes The OsSNAP32 has a molecular weight of 31.3 kD, comprises 283 amino acid residues, and contains Qb-SNARE and Qc-SNARE domains in the N- and C-terminal, respectively.
T6 790-972 Sentence denotes Multiple sequence alignment of the SNARE domains indicates that OsSNAP32 protein is homologous to HvSNAP34 and HvSNAP28 (63% and 55% of amino acid identity respectively) from barley.
T7 973-1121 Sentence denotes The transient expression method in onion epidermal cells, revealed that OsSNAP32 is located in the plasma membrane, like other SNAP25-type proteins.
T8 1122-1307 Sentence denotes Semi-quantitative RT-PCR assay showed that the OsSNAP32 is highly expressed in leaves and culms, and low in roots of rice, while hardly detected in immature spikes and flowering spikes.
T9 1308-1501 Sentence denotes The expression of OsSNAP32 was significantly activated in rice seedlings treated with H2O2, PEG6000, and low temperature or after inoculation with rice blast (Magnaporthe grisea strain Hoku 1).
T10 1502-1676 Sentence denotes The results suggest that this gene belongs to a novel member of this gene family encoding SNAP25-type proteins, involved in the rice responses to biotic and abiotic stresses.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-110 Sentence denotes Molecular cloning and characterization of a novel SNAP25-type protein gene OsSNAP32 in rice (Oryza sativa L.).
T2 111-344 Sentence denotes The SNAP25-type proteins belong to the superfamily of the SNAREs (soluble N-ethylmaleimide-sensitive factor attachment protein receptors), and function as important components of the vesical trafficking machinery in eukaryotic cells.
T3 345-488 Sentence denotes In this paper, we report the cloning and expression characterization of OsSNAP32 gene, and the subcellular localization of its encoded protein.
T4 489-623 Sentence denotes The OsSNAP32 gene contains five exons and four introns, and is located between RFLP markers C12276S and S1917 on chromosome 2 in rice.
T5 624-789 Sentence denotes The OsSNAP32 has a molecular weight of 31.3 kD, comprises 283 amino acid residues, and contains Qb-SNARE and Qc-SNARE domains in the N- and C-terminal, respectively.
T6 790-972 Sentence denotes Multiple sequence alignment of the SNARE domains indicates that OsSNAP32 protein is homologous to HvSNAP34 and HvSNAP28 (63% and 55% of amino acid identity respectively) from barley.
T7 973-1121 Sentence denotes The transient expression method in onion epidermal cells, revealed that OsSNAP32 is located in the plasma membrane, like other SNAP25-type proteins.
T8 1122-1307 Sentence denotes Semi-quantitative RT-PCR assay showed that the OsSNAP32 is highly expressed in leaves and culms, and low in roots of rice, while hardly detected in immature spikes and flowering spikes.
T9 1308-1501 Sentence denotes The expression of OsSNAP32 was significantly activated in rice seedlings treated with H2O2, PEG6000, and low temperature or after inoculation with rice blast (Magnaporthe grisea strain Hoku 1).
T10 1502-1676 Sentence denotes The results suggest that this gene belongs to a novel member of this gene family encoding SNAP25-type proteins, involved in the rice responses to biotic and abiotic stresses.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-110 Sentence denotes Molecular cloning and characterization of a novel SNAP25-type protein gene OsSNAP32 in rice (Oryza sativa L.).
T2 111-344 Sentence denotes The SNAP25-type proteins belong to the superfamily of the SNAREs (soluble N-ethylmaleimide-sensitive factor attachment protein receptors), and function as important components of the vesical trafficking machinery in eukaryotic cells.
T3 345-488 Sentence denotes In this paper, we report the cloning and expression characterization of OsSNAP32 gene, and the subcellular localization of its encoded protein.
T4 489-623 Sentence denotes The OsSNAP32 gene contains five exons and four introns, and is located between RFLP markers C12276S and S1917 on chromosome 2 in rice.
T5 624-789 Sentence denotes The OsSNAP32 has a molecular weight of 31.3 kD, comprises 283 amino acid residues, and contains Qb-SNARE and Qc-SNARE domains in the N- and C-terminal, respectively.
T6 790-972 Sentence denotes Multiple sequence alignment of the SNARE domains indicates that OsSNAP32 protein is homologous to HvSNAP34 and HvSNAP28 (63% and 55% of amino acid identity respectively) from barley.
T7 973-1121 Sentence denotes The transient expression method in onion epidermal cells, revealed that OsSNAP32 is located in the plasma membrane, like other SNAP25-type proteins.
T8 1122-1307 Sentence denotes Semi-quantitative RT-PCR assay showed that the OsSNAP32 is highly expressed in leaves and culms, and low in roots of rice, while hardly detected in immature spikes and flowering spikes.
T9 1308-1501 Sentence denotes The expression of OsSNAP32 was significantly activated in rice seedlings treated with H2O2, PEG6000, and low temperature or after inoculation with rice blast (Magnaporthe grisea strain Hoku 1).
T10 1502-1676 Sentence denotes The results suggest that this gene belongs to a novel member of this gene family encoding SNAP25-type proteins, involved in the rice responses to biotic and abiotic stresses.