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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-60 Sentence denotes Quinine-induced arrhythmia in a patient with severe malaria.
T2 61-249 Sentence denotes It was reported that there was a case of severe malaria patient with jaundice who presented with arrhythmia (premature ventricular contraction) while getting quinine infusion was reported.
T3 250-339 Sentence denotes A man, 25 years old, was admitted to hospital with high fever, chill, vomiting, jaundice.
T4 340-434 Sentence denotes The patient was fully conscious, blood pressure 120/80 mmHg, pulse rate 100 x/minute, regular.
T5 435-734 Sentence denotes On admission, laboratory examination showed Plasmodium falciparum (++++), total bilirubin 8.25 mg/dL, conjugated bilirubin 4.36 mg/dL, unconjugated bilirubin 3.89 mg/dL, potassium 3.52 meq/L Patient was diagnosed as severe malaria with jaundice and got quinine infusion in dextrose 5% 500 mg/8 hour.
T6 735-814 Sentence denotes On the second day the patient had vomitus, diarrhea, tinnitus, loss of hearing.
T7 815-1040 Sentence denotes After 30 hours of quinine infusion the patient felt palpitation and electrocardiography (ECG) recording showed premature ventricular contraction (PVC) > 5 x/minute, trigemini, constant type--sinoatrial block, positive U wave.
T8 1041-1174 Sentence denotes He was treated with lidocaine 50 mg intravenously followed by infusion 1500 mg in dextrose 5%/24 hour and potassium aspartate tablet.
T9 1175-1250 Sentence denotes Quinine infusion was discontinued and changed with sulfate quinine tablets.
T10 1251-1409 Sentence denotes Three hours later the patient felt better, the frequency of PVC reduced to 4 - 5 x/minute and on the third day ECG was normal, potassium level was 3.34 meq/L.
T11 1410-1457 Sentence denotes He was discharged on 7th day in good condition.
T12 1458-1658 Sentence denotes Quinine, like quinidine, is a chincona alkaloid that has anti-arrhythmic property, although it also pro-arrhythmic that can cause various arrhythmias, including severe arrhythmia such as multiple PVC.
T13 1659-1961 Sentence denotes Administration of parenteral quinine must be done carefully and with good observation because of its pro-arrhythmic effect, especially in older patients who have heart diseases or patients with electrolyte disorder (hypokalemia) which frequently occurs due to vomiting and or diarrhea in malaria cases.

LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 0-7 OrganismTaxon denotes Quinine NCBItxid:50278|NCBItxid:153742
T3 219-226 OrganismTaxon denotes quinine NCBItxid:50278|NCBItxid:153742
T5 252-255 OrganismTaxon denotes man NCBItxid:9606
T6 479-500 OrganismTaxon denotes Plasmodium falciparum NCBItxid:5833
T7 688-695 OrganismTaxon denotes quinine NCBItxid:50278|NCBItxid:153742
T9 833-840 OrganismTaxon denotes quinine NCBItxid:50278|NCBItxid:153742
T11 1175-1182 OrganismTaxon denotes Quinine NCBItxid:50278|NCBItxid:153742
T13 1234-1241 OrganismTaxon denotes quinine NCBItxid:50278|NCBItxid:153742
T15 1458-1465 OrganismTaxon denotes Quinine NCBItxid:50278|NCBItxid:153742
T17 1688-1695 OrganismTaxon denotes quinine NCBItxid:50278|NCBItxid:153742

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
3942 0-7 ChemicalEntity denotes Quinine MESH:D011803
3943 16-26 DiseaseOrPhenotypicFeature denotes arrhythmia MESH:D001145
3944 45-59 DiseaseOrPhenotypicFeature denotes severe malaria MESH:D016778
3945 102-116 DiseaseOrPhenotypicFeature denotes severe malaria MESH:D016778
3946 130-138 DiseaseOrPhenotypicFeature denotes jaundice MESH:D007565
3947 158-168 DiseaseOrPhenotypicFeature denotes arrhythmia MESH:D001145
3948 170-203 DiseaseOrPhenotypicFeature denotes premature ventricular contraction MESH:D018879
3949 219-226 ChemicalEntity denotes quinine MESH:D011803
3950 306-311 DiseaseOrPhenotypicFeature denotes fever MESH:D005334
3951 313-318 DiseaseOrPhenotypicFeature denotes chill MESH:D023341
3952 320-328 DiseaseOrPhenotypicFeature denotes vomiting MESH:D014839
3953 330-338 DiseaseOrPhenotypicFeature denotes jaundice MESH:D007565
3954 479-500 OrganismTaxon denotes Plasmodium falciparum NCBITaxon:5833
3955 515-524 ChemicalEntity denotes bilirubin MESH:D001663
3956 548-557 ChemicalEntity denotes bilirubin MESH:D001663
3957 583-592 ChemicalEntity denotes bilirubin MESH:D001663
3958 605-614 ChemicalEntity denotes potassium MESH:D011188
3959 651-665 DiseaseOrPhenotypicFeature denotes severe malaria MESH:D016778
3960 671-679 DiseaseOrPhenotypicFeature denotes jaundice MESH:D007565
3961 688-695 ChemicalEntity denotes quinine MESH:D011803
3962 708-716 ChemicalEntity denotes dextrose MESH:D005947
3963 769-776 DiseaseOrPhenotypicFeature denotes vomitus MESH:D014839
3964 778-786 DiseaseOrPhenotypicFeature denotes diarrhea MESH:D003967
3965 788-796 DiseaseOrPhenotypicFeature denotes tinnitus MESH:D014012
3966 798-813 DiseaseOrPhenotypicFeature denotes loss of hearing MESH:D034381
3967 833-840 ChemicalEntity denotes quinine MESH:D011803
3968 867-878 DiseaseOrPhenotypicFeature denotes palpitation MESH:D006331
3969 926-959 DiseaseOrPhenotypicFeature denotes premature ventricular contraction MESH:D018879
3970 961-964 DiseaseOrPhenotypicFeature denotes PVC MESH:D018879
3971 1006-1022 DiseaseOrPhenotypicFeature denotes sinoatrial block MESH:D012848
3972 1061-1070 ChemicalEntity denotes lidocaine MESH:D008012
3973 1123-1131 ChemicalEntity denotes dextrose MESH:D005947
3974 1147-1166 ChemicalEntity denotes potassium aspartate MESH:D001224
3975 1175-1182 ChemicalEntity denotes Quinine MESH:D011803
3976 1234-1241 ChemicalEntity denotes quinine MESH:D011803
3977 1311-1314 DiseaseOrPhenotypicFeature denotes PVC MESH:D018879
3978 1378-1387 ChemicalEntity denotes potassium MESH:D011188
3979 1458-1465 ChemicalEntity denotes Quinine MESH:D011803
3980 1472-1481 ChemicalEntity denotes quinidine MESH:D011802
3981 1488-1505 ChemicalEntity denotes chincona alkaloid
3982 1520-1530 DiseaseOrPhenotypicFeature denotes arrhythmic MESH:D001145
3983 1562-1572 DiseaseOrPhenotypicFeature denotes arrhythmic MESH:D001145
3984 1596-1607 DiseaseOrPhenotypicFeature denotes arrhythmias MESH:D001145
3985 1626-1636 DiseaseOrPhenotypicFeature denotes arrhythmia MESH:D001145
3986 1654-1657 DiseaseOrPhenotypicFeature denotes PVC MESH:D018879
3987 1688-1695 ChemicalEntity denotes quinine MESH:D011803
3988 1764-1774 DiseaseOrPhenotypicFeature denotes arrhythmic MESH:D001145
3989 1821-1835 DiseaseOrPhenotypicFeature denotes heart diseases MESH:D006331
3990 1853-1873 DiseaseOrPhenotypicFeature denotes electrolyte disorder MESH:D014883
3991 1875-1886 DiseaseOrPhenotypicFeature denotes hypokalemia MESH:D007008
3992 1919-1927 DiseaseOrPhenotypicFeature denotes vomiting MESH:D014839
3993 1935-1943 DiseaseOrPhenotypicFeature denotes diarrhea MESH:D003967
3994 1947-1954 DiseaseOrPhenotypicFeature denotes malaria MESH:D008288

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 52-59 DiseaseOrPhenotypicFeature denotes malaria 0005136
T2 109-116 DiseaseOrPhenotypicFeature denotes malaria 0005136
T3 658-665 DiseaseOrPhenotypicFeature denotes malaria 0005136
T4 1006-1022 DiseaseOrPhenotypicFeature denotes sinoatrial block 0020806
T5 1821-1835 DiseaseOrPhenotypicFeature denotes heart diseases 0005267
T6 1947-1954 DiseaseOrPhenotypicFeature denotes malaria 0005136

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 130-138 GeneOrGeneProduct denotes jaundice
T2 301-305 GeneOrGeneProduct denotes high
T3 330-338 GeneOrGeneProduct denotes jaundice
T4 418-424 GeneOrGeneProduct denotes minute
T5 426-433 GeneOrGeneProduct denotes regular
T6 509-524 GeneOrGeneProduct denotes total bilirubin
T7 671-679 GeneOrGeneProduct denotes jaundice
T8 972-978 GeneOrGeneProduct denotes minute
T9 1035-1039 GeneOrGeneProduct denotes wave
T10 1157-1166 GeneOrGeneProduct denotes aspartate
T11 1298-1307 GeneOrGeneProduct denotes frequency
T12 1315-1322 GeneOrGeneProduct denotes reduced
T13 1334-1340 GeneOrGeneProduct denotes minute
T14 1378-1393 GeneOrGeneProduct denotes potassium level
T15 1467-1471 GeneOrGeneProduct denotes like
T16 1645-1653 GeneOrGeneProduct denotes multiple
T17 1821-1826 GeneOrGeneProduct denotes heart

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 8-15 GeneOrGeneProduct denotes induced
T2 27-31 GeneOrGeneProduct denotes in a
T3 94-98 GeneOrGeneProduct denotes case
T4 130-138 GeneOrGeneProduct denotes jaundice
T5 250-255 GeneOrGeneProduct denotes A man
T6 260-265 GeneOrGeneProduct denotes years
T7 301-305 GeneOrGeneProduct denotes high
T8 330-338 GeneOrGeneProduct denotes jaundice
T9 418-424 GeneOrGeneProduct denotes minute
T10 426-433 GeneOrGeneProduct denotes regular
T11 509-524 GeneOrGeneProduct denotes total bilirubin
T12 530-532 GeneOrGeneProduct denotes mg
T13 563-565 GeneOrGeneProduct denotes mg
T14 598-600 GeneOrGeneProduct denotes mg
T15 671-679 GeneOrGeneProduct denotes jaundice
T16 724-726 GeneOrGeneProduct denotes mg
T17 961-964 GeneOrGeneProduct denotes PVC
T18 972-978 GeneOrGeneProduct denotes minute
T19 1017-1022 GeneOrGeneProduct denotes block
T20 1035-1039 GeneOrGeneProduct denotes wave
T21 1074-1076 GeneOrGeneProduct denotes mg
T22 1117-1119 GeneOrGeneProduct denotes mg
T23 1157-1166 GeneOrGeneProduct denotes aspartate
T24 1226-1233 GeneOrGeneProduct denotes sulfate
T25 1263-1268 GeneOrGeneProduct denotes later
T26 1298-1307 GeneOrGeneProduct denotes frequency
T27 1311-1314 GeneOrGeneProduct denotes PVC
T28 1315-1322 GeneOrGeneProduct denotes reduced
T29 1334-1340 GeneOrGeneProduct denotes minute
T30 1378-1393 GeneOrGeneProduct denotes potassium level
T31 1467-1471 GeneOrGeneProduct denotes like
T32 1558-1561 GeneOrGeneProduct denotes pro
T33 1645-1653 GeneOrGeneProduct denotes multiple
T34 1654-1657 GeneOrGeneProduct denotes PVC
T35 1756-1763 GeneOrGeneProduct denotes its pro
T36 1821-1826 GeneOrGeneProduct denotes heart
T37 1955-1960 GeneOrGeneProduct denotes cases

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 16-26 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T2 52-59 DiseaseOrPhenotypicFeature denotes malaria D008288
T3 109-116 DiseaseOrPhenotypicFeature denotes malaria D008288
T4 130-138 DiseaseOrPhenotypicFeature denotes jaundice D007565
T5 158-168 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T6 170-203 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T7 306-311 DiseaseOrPhenotypicFeature denotes fever D005334
T8 320-328 DiseaseOrPhenotypicFeature denotes vomiting D014839
T9 330-338 DiseaseOrPhenotypicFeature denotes jaundice D007565
T10 658-665 DiseaseOrPhenotypicFeature denotes malaria D008288
T11 671-679 DiseaseOrPhenotypicFeature denotes jaundice D007565
T12 778-786 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T13 788-796 DiseaseOrPhenotypicFeature denotes tinnitus D014012
T14 798-813 DiseaseOrPhenotypicFeature denotes loss of hearing D034381
T15 926-959 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T16 961-964 DiseaseOrPhenotypicFeature denotes PVC D018879
T17 1006-1022 DiseaseOrPhenotypicFeature denotes sinoatrial block D012848
T18 1311-1314 DiseaseOrPhenotypicFeature denotes PVC D018879
T19 1520-1530 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T20 1562-1572 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T21 1596-1607 DiseaseOrPhenotypicFeature denotes arrhythmias D001145
T22 1626-1636 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T23 1654-1657 DiseaseOrPhenotypicFeature denotes PVC D018879
T24 1764-1774 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T25 1821-1835 DiseaseOrPhenotypicFeature denotes heart diseases D006331
T26 1875-1886 DiseaseOrPhenotypicFeature denotes hypokalemia D007008
T27 1919-1927 DiseaseOrPhenotypicFeature denotes vomiting D014839
T28 1935-1943 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T29 1947-1954 DiseaseOrPhenotypicFeature denotes malaria D008288

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 426-433 GeneOrGeneProduct denotes regular
T2 509-524 GeneOrGeneProduct denotes total bilirubin
T3 1035-1039 GeneOrGeneProduct denotes wave

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 16-26 DiseaseOrPhenotypicFeature denotes arrhythmia 0007263
T2 52-59 DiseaseOrPhenotypicFeature denotes malaria 0005136
T3 109-116 DiseaseOrPhenotypicFeature denotes malaria 0005136
T4 158-168 DiseaseOrPhenotypicFeature denotes arrhythmia 0007263
T5 658-665 DiseaseOrPhenotypicFeature denotes malaria 0005136
T6 778-786 DiseaseOrPhenotypicFeature denotes diarrhea 0001673
T7 798-813 DiseaseOrPhenotypicFeature denotes loss of hearing 0005365
T8 1006-1022 DiseaseOrPhenotypicFeature denotes sinoatrial block 0020806
T9 1578-1581 DiseaseOrPhenotypicFeature denotes can 0012833
T10 1626-1636 DiseaseOrPhenotypicFeature denotes arrhythmia 0007263
T11 1875-1886 DiseaseOrPhenotypicFeature denotes hypokalemia 0003019
T12 1935-1943 DiseaseOrPhenotypicFeature denotes diarrhea 0001673
T13 1947-1954 DiseaseOrPhenotypicFeature denotes malaria 0005136

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 16-26 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T2 52-59 DiseaseOrPhenotypicFeature denotes malaria D008288
T3 109-116 DiseaseOrPhenotypicFeature denotes malaria D008288
T4 130-138 DiseaseOrPhenotypicFeature denotes jaundice D007565
T5 158-168 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T6 170-203 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T7 306-311 DiseaseOrPhenotypicFeature denotes fever D005334
T8 313-318 DiseaseOrPhenotypicFeature denotes chill DISEASE
T9 320-328 DiseaseOrPhenotypicFeature denotes vomiting D014839
T10 330-338 DiseaseOrPhenotypicFeature denotes jaundice D007565
T11 658-665 DiseaseOrPhenotypicFeature denotes malaria D008288
T12 671-679 DiseaseOrPhenotypicFeature denotes jaundice D007565
T13 769-776 DiseaseOrPhenotypicFeature denotes vomitus DISEASE
T14 778-786 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T15 788-796 DiseaseOrPhenotypicFeature denotes tinnitus D014012
T16 798-813 DiseaseOrPhenotypicFeature denotes loss of hearing D034381
T17 867-878 DiseaseOrPhenotypicFeature denotes palpitation DISEASE
T18 926-959 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T19 961-964 DiseaseOrPhenotypicFeature denotes PVC D018879
T20 1006-1022 DiseaseOrPhenotypicFeature denotes sinoatrial block D012848
T21 1311-1314 DiseaseOrPhenotypicFeature denotes PVC D018879
T22 1520-1530 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T23 1562-1572 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T24 1596-1607 DiseaseOrPhenotypicFeature denotes arrhythmias D001145
T25 1626-1636 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T26 1654-1657 DiseaseOrPhenotypicFeature denotes PVC D018879
T27 1764-1774 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T28 1821-1835 DiseaseOrPhenotypicFeature denotes heart diseases D006331
T29 1853-1873 DiseaseOrPhenotypicFeature denotes electrolyte disorder DISEASE
T30 1875-1886 DiseaseOrPhenotypicFeature denotes hypokalemia D007008
T31 1919-1927 DiseaseOrPhenotypicFeature denotes vomiting D014839
T32 1935-1943 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T33 1947-1954 DiseaseOrPhenotypicFeature denotes malaria D008288

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 16-26 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T2 52-59 DiseaseOrPhenotypicFeature denotes malaria D008288
T3 109-116 DiseaseOrPhenotypicFeature denotes malaria D008288
T4 130-138 DiseaseOrPhenotypicFeature denotes jaundice D007565
T5 158-168 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T6 170-203 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T7 306-311 DiseaseOrPhenotypicFeature denotes fever D005334
T8 313-318 DiseaseOrPhenotypicFeature denotes chill DISEASE
T9 320-328 DiseaseOrPhenotypicFeature denotes vomiting D014839
T10 330-338 DiseaseOrPhenotypicFeature denotes jaundice D007565
T11 658-665 DiseaseOrPhenotypicFeature denotes malaria D008288
T12 671-679 DiseaseOrPhenotypicFeature denotes jaundice D007565
T13 769-776 DiseaseOrPhenotypicFeature denotes vomitus DISEASE
T14 778-786 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T15 788-796 DiseaseOrPhenotypicFeature denotes tinnitus D014012
T16 798-813 DiseaseOrPhenotypicFeature denotes loss of hearing D034381
T17 867-878 DiseaseOrPhenotypicFeature denotes palpitation DISEASE
T18 926-959 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T19 961-964 DiseaseOrPhenotypicFeature denotes PVC D018879
T20 1006-1022 DiseaseOrPhenotypicFeature denotes sinoatrial block D012848
T21 1311-1314 DiseaseOrPhenotypicFeature denotes PVC D018879
T22 1520-1530 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T23 1562-1572 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T24 1596-1607 DiseaseOrPhenotypicFeature denotes arrhythmias D001145
T25 1626-1636 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T26 1654-1657 DiseaseOrPhenotypicFeature denotes PVC D018879
T27 1764-1774 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T28 1821-1835 DiseaseOrPhenotypicFeature denotes heart diseases D006331
T29 1853-1873 DiseaseOrPhenotypicFeature denotes electrolyte disorder DISEASE
T30 1875-1886 DiseaseOrPhenotypicFeature denotes hypokalemia D007008
T31 1919-1927 DiseaseOrPhenotypicFeature denotes vomiting D014839
T32 1935-1943 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T33 1947-1954 DiseaseOrPhenotypicFeature denotes malaria D008288

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 0-7 ChemicalEntity denotes Quinine http://purl.obolibrary.org/obo/CHEBI_15854
T2 219-226 ChemicalEntity denotes quinine D011803|http://purl.obolibrary.org/obo/CHEBI_15854|http://purl.obolibrary.org/obo/CHEBI_137041
T5 515-524 ChemicalEntity denotes bilirubin D001663|http://purl.obolibrary.org/obo/CHEBI_16990
T7 548-557 ChemicalEntity denotes bilirubin D001663|http://purl.obolibrary.org/obo/CHEBI_16990
T9 583-592 ChemicalEntity denotes bilirubin D001663|http://purl.obolibrary.org/obo/CHEBI_16990
T11 605-614 ChemicalEntity denotes potassium D011188|http://purl.obolibrary.org/obo/CHEBI_26216
T13 688-695 ChemicalEntity denotes quinine D011803|http://purl.obolibrary.org/obo/CHEBI_15854|http://purl.obolibrary.org/obo/CHEBI_137041
T16 708-716 ChemicalEntity denotes dextrose D005947|http://purl.obolibrary.org/obo/CHEBI_17634
T18 833-840 ChemicalEntity denotes quinine D011803|http://purl.obolibrary.org/obo/CHEBI_15854|http://purl.obolibrary.org/obo/CHEBI_137041
T21 904-907 ChemicalEntity denotes ECG http://purl.obolibrary.org/obo/CHEBI_70255
T22 961-964 ChemicalEntity denotes PVC D011143|http://purl.obolibrary.org/obo/CHEBI_53243
T24 1061-1070 ChemicalEntity denotes lidocaine D008012|http://purl.obolibrary.org/obo/CHEBI_6456
T26 1123-1131 ChemicalEntity denotes dextrose D005947|http://purl.obolibrary.org/obo/CHEBI_17634
T28 1147-1156 ChemicalEntity denotes potassium D011188|http://purl.obolibrary.org/obo/CHEBI_26216
T30 1157-1166 ChemicalEntity denotes aspartate http://purl.obolibrary.org/obo/CHEBI_72314|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_132943
T33 1167-1173 ChemicalEntity denotes tablet D013607
T34 1175-1182 ChemicalEntity denotes Quinine http://purl.obolibrary.org/obo/CHEBI_15854
T35 1234-1241 ChemicalEntity denotes quinine D011803|http://purl.obolibrary.org/obo/CHEBI_15854|http://purl.obolibrary.org/obo/CHEBI_137041
T38 1242-1249 ChemicalEntity denotes tablets D013607
T39 1311-1314 ChemicalEntity denotes PVC D011143|http://purl.obolibrary.org/obo/CHEBI_53243
T41 1362-1365 ChemicalEntity denotes ECG http://purl.obolibrary.org/obo/CHEBI_70255
T42 1378-1387 ChemicalEntity denotes potassium D011188|http://purl.obolibrary.org/obo/CHEBI_26216
T44 1458-1465 ChemicalEntity denotes Quinine http://purl.obolibrary.org/obo/CHEBI_15854
T45 1472-1481 ChemicalEntity denotes quinidine D011802|http://purl.obolibrary.org/obo/CHEBI_28593
T47 1497-1505 ChemicalEntity denotes alkaloid D000470|http://purl.obolibrary.org/obo/CHEBI_22315
T49 1654-1657 ChemicalEntity denotes PVC D011143|http://purl.obolibrary.org/obo/CHEBI_53243
T51 1688-1695 ChemicalEntity denotes quinine D011803|http://purl.obolibrary.org/obo/CHEBI_15854|http://purl.obolibrary.org/obo/CHEBI_137041
T54 1853-1864 ChemicalEntity denotes electrolyte D004573

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 32-39 OrganismTaxon denotes patient
T2 117-124 OrganismTaxon denotes patient
T3 252-255 OrganismTaxon denotes man
T4 344-351 OrganismTaxon denotes patient
T5 479-500 OrganismTaxon denotes Plasmodium falciparum
T6 626-633 OrganismTaxon denotes Patient
T7 757-764 OrganismTaxon denotes patient
T8 854-861 OrganismTaxon denotes patient
T9 1273-1280 OrganismTaxon denotes patient
T10 1803-1811 OrganismTaxon denotes patients
T11 1839-1847 OrganismTaxon denotes patients

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T54 1853-1864 ChemicalEntity denotes electrolyte D004573
T51 1688-1695 ChemicalEntity denotes quinine http://purl.obolibrary.org/obo/CHEBI_137041|http://purl.obolibrary.org/obo/CHEBI_15854|D011803
T49 1654-1657 ChemicalEntity denotes PVC http://purl.obolibrary.org/obo/CHEBI_53243|D011143
T47 1497-1505 ChemicalEntity denotes alkaloid http://purl.obolibrary.org/obo/CHEBI_22315|D000470
T45 1472-1481 ChemicalEntity denotes quinidine http://purl.obolibrary.org/obo/CHEBI_28593|D011802
T44 1458-1465 ChemicalEntity denotes Quinine http://purl.obolibrary.org/obo/CHEBI_15854
T42 1378-1387 ChemicalEntity denotes potassium http://purl.obolibrary.org/obo/CHEBI_26216|D011188
T41 1362-1365 ChemicalEntity denotes ECG http://purl.obolibrary.org/obo/CHEBI_70255
T39 1311-1314 ChemicalEntity denotes PVC http://purl.obolibrary.org/obo/CHEBI_53243|D011143
T38 1242-1249 ChemicalEntity denotes tablets D013607
T35 1234-1241 ChemicalEntity denotes quinine http://purl.obolibrary.org/obo/CHEBI_137041|http://purl.obolibrary.org/obo/CHEBI_15854|D011803
T34 1175-1182 ChemicalEntity denotes Quinine http://purl.obolibrary.org/obo/CHEBI_15854
T33 1167-1173 ChemicalEntity denotes tablet D013607
T30 1157-1166 ChemicalEntity denotes aspartate http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314
T28 1147-1156 ChemicalEntity denotes potassium http://purl.obolibrary.org/obo/CHEBI_26216|D011188
T26 1123-1131 ChemicalEntity denotes dextrose http://purl.obolibrary.org/obo/CHEBI_17634|D005947
T24 1061-1070 ChemicalEntity denotes lidocaine http://purl.obolibrary.org/obo/CHEBI_6456|D008012
T22 961-964 ChemicalEntity denotes PVC http://purl.obolibrary.org/obo/CHEBI_53243|D011143
T21 904-907 ChemicalEntity denotes ECG http://purl.obolibrary.org/obo/CHEBI_70255
T18 833-840 ChemicalEntity denotes quinine http://purl.obolibrary.org/obo/CHEBI_137041|http://purl.obolibrary.org/obo/CHEBI_15854|D011803
T16 708-716 ChemicalEntity denotes dextrose http://purl.obolibrary.org/obo/CHEBI_17634|D005947
T13 688-695 ChemicalEntity denotes quinine http://purl.obolibrary.org/obo/CHEBI_137041|http://purl.obolibrary.org/obo/CHEBI_15854|D011803
T11 605-614 ChemicalEntity denotes potassium http://purl.obolibrary.org/obo/CHEBI_26216|D011188
T9 583-592 ChemicalEntity denotes bilirubin http://purl.obolibrary.org/obo/CHEBI_16990|D001663
T7 548-557 ChemicalEntity denotes bilirubin http://purl.obolibrary.org/obo/CHEBI_16990|D001663
T5 515-524 ChemicalEntity denotes bilirubin http://purl.obolibrary.org/obo/CHEBI_16990|D001663
T2 219-226 ChemicalEntity denotes quinine http://purl.obolibrary.org/obo/CHEBI_137041|http://purl.obolibrary.org/obo/CHEBI_15854|D011803
T1 0-7 ChemicalEntity denotes Quinine http://purl.obolibrary.org/obo/CHEBI_15854
T3 1035-1039 GeneOrGeneProduct denotes wave
T17578 509-524 GeneOrGeneProduct denotes total bilirubin
T15990 426-433 GeneOrGeneProduct denotes regular
T62378 1947-1954 DiseaseOrPhenotypicFeature denotes malaria D008288
T32 1935-1943 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T31 1919-1927 DiseaseOrPhenotypicFeature denotes vomiting D014839
T99738 1875-1886 DiseaseOrPhenotypicFeature denotes hypokalemia D007008
T29 1853-1873 DiseaseOrPhenotypicFeature denotes electrolyte disorder DISEASE
T63984 1821-1835 DiseaseOrPhenotypicFeature denotes heart diseases D006331
T27 1764-1774 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T29821 1654-1657 DiseaseOrPhenotypicFeature denotes PVC D018879
T25 1626-1636 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T81675 1596-1607 DiseaseOrPhenotypicFeature denotes arrhythmias D001145
T23 1562-1572 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T89013 1520-1530 DiseaseOrPhenotypicFeature denotes arrhythmic DISEASE
T91656 1311-1314 DiseaseOrPhenotypicFeature denotes PVC D018879
T20 1006-1022 DiseaseOrPhenotypicFeature denotes sinoatrial block D012848
T19 961-964 DiseaseOrPhenotypicFeature denotes PVC D018879
T61594 926-959 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T17 867-878 DiseaseOrPhenotypicFeature denotes palpitation DISEASE
T41421 798-813 DiseaseOrPhenotypicFeature denotes loss of hearing D034381
T15 788-796 DiseaseOrPhenotypicFeature denotes tinnitus D014012
T14 778-786 DiseaseOrPhenotypicFeature denotes diarrhea D003967
T65378 769-776 DiseaseOrPhenotypicFeature denotes vomitus DISEASE
T12 671-679 DiseaseOrPhenotypicFeature denotes jaundice D007565
T79164 658-665 DiseaseOrPhenotypicFeature denotes malaria D008288
T10 330-338 DiseaseOrPhenotypicFeature denotes jaundice D007565
T95560 320-328 DiseaseOrPhenotypicFeature denotes vomiting D014839
T8 313-318 DiseaseOrPhenotypicFeature denotes chill DISEASE
T51778 306-311 DiseaseOrPhenotypicFeature denotes fever D005334
T6 170-203 DiseaseOrPhenotypicFeature denotes premature ventricular contraction D018879
T36099 158-168 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T4 130-138 DiseaseOrPhenotypicFeature denotes jaundice D007565
T60099 109-116 DiseaseOrPhenotypicFeature denotes malaria D008288
T45844 52-59 DiseaseOrPhenotypicFeature denotes malaria D008288
T87633 16-26 DiseaseOrPhenotypicFeature denotes arrhythmia D001145
T56352 1839-1847 OrganismTaxon denotes patients
T98411 1803-1811 OrganismTaxon denotes patients
T31466 1273-1280 OrganismTaxon denotes patient
T32941 854-861 OrganismTaxon denotes patient
T34217 757-764 OrganismTaxon denotes patient
T12730 626-633 OrganismTaxon denotes Patient
T16318 479-500 OrganismTaxon denotes Plasmodium falciparum
T34001 344-351 OrganismTaxon denotes patient
T51692 252-255 OrganismTaxon denotes man
T78133 117-124 OrganismTaxon denotes patient
T27175 32-39 OrganismTaxon denotes patient

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-60 Sentence denotes Quinine-induced arrhythmia in a patient with severe malaria.
TextSentencer_T2 61-249 Sentence denotes It was reported that there was a case of severe malaria patient with jaundice who presented with arrhythmia (premature ventricular contraction) while getting quinine infusion was reported.
TextSentencer_T3 250-339 Sentence denotes A man, 25 years old, was admitted to hospital with high fever, chill, vomiting, jaundice.
TextSentencer_T4 340-434 Sentence denotes The patient was fully conscious, blood pressure 120/80 mmHg, pulse rate 100 x/minute, regular.
TextSentencer_T5 435-734 Sentence denotes On admission, laboratory examination showed Plasmodium falciparum (++++), total bilirubin 8.25 mg/dL, conjugated bilirubin 4.36 mg/dL, unconjugated bilirubin 3.89 mg/dL, potassium 3.52 meq/L Patient was diagnosed as severe malaria with jaundice and got quinine infusion in dextrose 5% 500 mg/8 hour.
TextSentencer_T6 735-814 Sentence denotes On the second day the patient had vomitus, diarrhea, tinnitus, loss of hearing.
TextSentencer_T7 815-1040 Sentence denotes After 30 hours of quinine infusion the patient felt palpitation and electrocardiography (ECG) recording showed premature ventricular contraction (PVC) > 5 x/minute, trigemini, constant type--sinoatrial block, positive U wave.
TextSentencer_T8 1041-1174 Sentence denotes He was treated with lidocaine 50 mg intravenously followed by infusion 1500 mg in dextrose 5%/24 hour and potassium aspartate tablet.
TextSentencer_T9 1175-1250 Sentence denotes Quinine infusion was discontinued and changed with sulfate quinine tablets.
TextSentencer_T10 1251-1409 Sentence denotes Three hours later the patient felt better, the frequency of PVC reduced to 4 - 5 x/minute and on the third day ECG was normal, potassium level was 3.34 meq/L.
TextSentencer_T11 1410-1457 Sentence denotes He was discharged on 7th day in good condition.
TextSentencer_T12 1458-1658 Sentence denotes Quinine, like quinidine, is a chincona alkaloid that has anti-arrhythmic property, although it also pro-arrhythmic that can cause various arrhythmias, including severe arrhythmia such as multiple PVC.
TextSentencer_T13 1659-1961 Sentence denotes Administration of parenteral quinine must be done carefully and with good observation because of its pro-arrhythmic effect, especially in older patients who have heart diseases or patients with electrolyte disorder (hypokalemia) which frequently occurs due to vomiting and or diarrhea in malaria cases.
T1 0-60 Sentence denotes Quinine-induced arrhythmia in a patient with severe malaria.
T2 61-249 Sentence denotes It was reported that there was a case of severe malaria patient with jaundice who presented with arrhythmia (premature ventricular contraction) while getting quinine infusion was reported.
T3 250-339 Sentence denotes A man, 25 years old, was admitted to hospital with high fever, chill, vomiting, jaundice.
T4 340-434 Sentence denotes The patient was fully conscious, blood pressure 120/80 mmHg, pulse rate 100 x/minute, regular.
T5 435-734 Sentence denotes On admission, laboratory examination showed Plasmodium falciparum (++++), total bilirubin 8.25 mg/dL, conjugated bilirubin 4.36 mg/dL, unconjugated bilirubin 3.89 mg/dL, potassium 3.52 meq/L Patient was diagnosed as severe malaria with jaundice and got quinine infusion in dextrose 5% 500 mg/8 hour.
T6 735-814 Sentence denotes On the second day the patient had vomitus, diarrhea, tinnitus, loss of hearing.
T7 815-1040 Sentence denotes After 30 hours of quinine infusion the patient felt palpitation and electrocardiography (ECG) recording showed premature ventricular contraction (PVC) > 5 x/minute, trigemini, constant type--sinoatrial block, positive U wave.
T8 1041-1174 Sentence denotes He was treated with lidocaine 50 mg intravenously followed by infusion 1500 mg in dextrose 5%/24 hour and potassium aspartate tablet.
T9 1175-1250 Sentence denotes Quinine infusion was discontinued and changed with sulfate quinine tablets.
T10 1251-1409 Sentence denotes Three hours later the patient felt better, the frequency of PVC reduced to 4 - 5 x/minute and on the third day ECG was normal, potassium level was 3.34 meq/L.
T11 1410-1457 Sentence denotes He was discharged on 7th day in good condition.
T12 1458-1658 Sentence denotes Quinine, like quinidine, is a chincona alkaloid that has anti-arrhythmic property, although it also pro-arrhythmic that can cause various arrhythmias, including severe arrhythmia such as multiple PVC.
T13 1659-1961 Sentence denotes Administration of parenteral quinine must be done carefully and with good observation because of its pro-arrhythmic effect, especially in older patients who have heart diseases or patients with electrolyte disorder (hypokalemia) which frequently occurs due to vomiting and or diarrhea in malaria cases.

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 130-138 HP_0000952 denotes jaundice
T2 158-168 HP_0011675 denotes arrhythmia
T3 170-203 HP_0006682 denotes premature ventricular contraction
T4 192-203 HP_0001371 denotes contraction
T5 306-311 HP_0001945 denotes fever
T6 330-338 HP_0000952 denotes jaundice
T7 671-679 HP_0000952 denotes jaundice
T8 778-786 HP_0002014 denotes diarrhea
T9 788-796 HP_0000360 denotes tinnitus
T10 798-813 HP_0000365 denotes loss of hearing
T11 867-878 HP_0001962 denotes palpitation
T12 926-959 HP_0006682 denotes premature ventricular contraction
T13 948-959 HP_0001371 denotes contraction
T14 1006-1022 HP_0012723 denotes sinoatrial block
T15 1596-1607 HP_0011675 denotes arrhythmias
T16 1626-1636 HP_0011675 denotes arrhythmia
T17 1853-1873 HP_0003111 denotes electrolyte disorder
T18 1875-1886 HP_0002900 denotes hypokalemia
T19 1935-1943 HP_0002014 denotes diarrhea

PubCasesHPO

Id Subject Object Predicate Lexical cue
TI1 16-26 HP:0011675 denotes arrhythmia
AB1 130-138 HP:0000952 denotes jaundice
AB2 158-168 HP:0011675 denotes arrhythmia
AB3 306-311 HP:0001945 denotes fever
AB4 313-318 HP:0025143 denotes chill
AB5 320-328 HP:0002013 denotes vomiting
AB6 330-338 HP:0000952 denotes jaundice
AB7 671-679 HP:0000952 denotes jaundice
AB8 778-786 HP:0002014 denotes diarrhea
AB9 788-796 HP:0000360 denotes tinnitus
AB10 867-878 HP:0001962 denotes palpitation
AB11 1006-1022 HP:0012723 denotes sinoatrial block
AB12 1596-1607 HP:0011675 denotes arrhythmias
AB13 1626-1636 HP:0011675 denotes arrhythmia
AB14 1875-1886 HP:0002900 denotes hypokalemia
AB15 1919-1927 HP:0002013 denotes vomiting
AB16 1935-1943 HP:0002014 denotes diarrhea

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 109-116 ORDO:673 denotes malaria
TI1 52-59 ORDO:673 denotes malaria
AB2 211-218 ORDO:280774 denotes getting
AB3 658-665 ORDO:673 denotes malaria
AB4 684-687 ORDO:280774 denotes got
AB5 1947-1954 ORDO:673 denotes malaria

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 373-378 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
PD-UBERON-AE-B_T2 1821-1826 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
PD-UBERON-AE-B_T3 320-328 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting
PD-UBERON-AE-B_T4 1919-1927 http://purl.obolibrary.org/obo/UBERON_0000172 denotes vomiting