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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-72 Sentence denotes Polymorphic Alu insertions and the genetic structure of Iberian Basques.
T2 73-232 Sentence denotes Eight Alu sequences (ACE, TPA25, PV92, APO, FXIIIB, D1, A25 and B65) were analyzed in two samples from Navarre and Guipúzcoa provinces (Basque Country, Spain).
T3 233-442 Sentence denotes Alu data for other European, Caucasus and North African populations were compiled from the literature for comparison purposes to assess the genetic relationships of the Basques in a broader geographic context.
T4 443-576 Sentence denotes Results of both MDS plot and AMOVA revealed spatial heterogeneity among these three population clusters clearly defined by geography.
T5 577-741 Sentence denotes On the contrary, no substantial genetic heterogeneity was found between the Basque samples, or between Basques and other Europeans (excluding Caucasus populations).
T6 742-938 Sentence denotes Moreover, the genetic information obtained from Alu data conflicts with hypotheses linking the origin of Basques with populations from North Africa (Berbers) or from the Caucasus region (Georgia).
T7 939-1257 Sentence denotes In order to explain the reduced genetic heterogeneity detected by Alu insertions among Basque subpopulations, values of the Wright's F(ST )statistic were estimated for both Alu markers and a set of short tandem repeats (STRs) in terms of two geographical scales: (1) the Basque Country, (2) Europe (including Basques).
T8 1258-1396 Sentence denotes In the Basque area, estimates of Wahlund's effect for both genetic markers showed no statistical difference between Basque subpopulations.
T9 1397-1539 Sentence denotes However, when this analysis was performed on a European scale, F(ST) values were significantly higher for Alu insertions than for STR alleles.
T10 1540-1863 Sentence denotes From these results, we suggest that the spatial heterogeneity of the Basque gene pool identified in previous polymorphism studies is relatively recent and probably caused by a differential process of genetic admixture with non-Basque neighboring populations modulated by the effect of a linguistic barrier to random mating.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
3934 94-97 GeneOrGeneProduct denotes ACE NCBIGene:1636
3935 99-104 GeneOrGeneProduct denotes TPA25
3936 106-110 GeneOrGeneProduct denotes PV92
3937 112-115 GeneOrGeneProduct denotes APO NCBIGene:84909
3938 117-123 GeneOrGeneProduct denotes FXIIIB NCBIGene:2165
3939 125-127 GeneOrGeneProduct denotes D1
3940 129-132 GeneOrGeneProduct denotes A25 NCBIGene:28936
3941 137-140 GeneOrGeneProduct denotes B65

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 112-115 GeneOrGeneProduct denotes APO
T2 117-123 GeneOrGeneProduct denotes FXIIIB
T3 246-251 GeneOrGeneProduct denotes other
T4 487-494 GeneOrGeneProduct denotes spatial
T5 692-697 GeneOrGeneProduct denotes other
T6 963-970 GeneOrGeneProduct denotes reduced
T7 1272-1276 GeneOrGeneProduct denotes area
T8 1580-1587 GeneOrGeneProduct denotes spatial

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 94-97 GeneOrGeneProduct denotes ACE
T2 112-115 GeneOrGeneProduct denotes APO
T3 117-123 GeneOrGeneProduct denotes FXIIIB
T4 129-132 GeneOrGeneProduct denotes A25
T5 246-251 GeneOrGeneProduct denotes other
T6 410-414 GeneOrGeneProduct denotes in a
T7 487-494 GeneOrGeneProduct denotes spatial
T8 692-697 GeneOrGeneProduct denotes other
T9 825-832 GeneOrGeneProduct denotes linking
T10 963-970 GeneOrGeneProduct denotes reduced
T11 1049-1055 GeneOrGeneProduct denotes values
T12 1159-1163 GeneOrGeneProduct denotes STRs
T13 1168-1173 GeneOrGeneProduct denotes terms
T14 1272-1276 GeneOrGeneProduct denotes area
T15 1466-1472 GeneOrGeneProduct denotes values
T16 1580-1587 GeneOrGeneProduct denotes spatial
T17 1695-1703 GeneOrGeneProduct denotes probably
T18 1729-1736 GeneOrGeneProduct denotes process
T19 1856-1862 GeneOrGeneProduct denotes mating

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 112-115 GeneOrGeneProduct denotes APO
T2 117-123 GeneOrGeneProduct denotes FXIIIB

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 459-462 DiseaseOrPhenotypicFeature denotes MDS 0018881

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 112-115 ChemicalEntity denotes APO http://purl.obolibrary.org/obo/CHEBI_82546|http://purl.obolibrary.org/obo/CHEBI_53704
T3 1317-1332 ChemicalEntity denotes genetic markers D005819

LitCoin-training-merged

Id Subject Object Predicate Lexical cue ID:
T3 1317-1332 ChemicalEntity denotes genetic markers D005819
T1 112-115 ChemicalEntity denotes APO http://purl.obolibrary.org/obo/CHEBI_53704|http://purl.obolibrary.org/obo/CHEBI_82546
T2 117-123 GeneOrGeneProduct denotes FXIIIB
T80528 112-115 GeneOrGeneProduct denotes APO