PubMed:17221232
Annnotations
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 164-176 | xzyao:1553 | denotes | Oryza sativa |
| M_1 | 1071-1083 | funRiceGene:103 | denotes | reproductive |
| M_2 | 869-893 | xzyao:31534 | denotes | transcriptional activity |
| M_3 | 1153-1185 | xzyao:19875 | denotes | significantly higher grain yield |
| M_4 | 108-118 | funRiceGene:228 | denotes | resistance |
| M_5 | 1057-1067 | funRiceGene:228 | denotes | resistance |
| M_6 | 1813-1823 | funRiceGene:228 | denotes | resistance |
| M_7 | 829-837 | xzyao:40837 | denotes | GUS gene |
| M_8 | 716-728 | xzyao:3911 | denotes | GUS activity |
| M_9 | 1174-1185 | funRiceGene:312, xzyao:28456 | denotes | grain yield |
| M_10 | 1180-1185 | funRiceGene:377 | denotes | yield |
| M_11 | 1367-1372 | funRiceGene:377 | denotes | yield |
| M_12 | 357-370 | xzyao:45052 | denotes | plant species |
| M_13 | 1174-1179 | funRiceGene:91 | denotes | grain |
| M_14 | 1407-1424 | xzyao:5366 | denotes | growth conditions |
| M_15 | 689-707 | xzyao:878 | denotes | dehydration stress |
| M_16 | 1311-1332 | xzyao:34628 | denotes | severe drought stress |
| M_17 | 1167-1185 | xzyao:36065 | denotes | higher grain yield |
| M_18 | 1400-1413 | xzyao:22172 | denotes | normal growth |
| M_19 | 1190-1194 | PO:0009010, funRiceGene:180 | denotes | seed |
| M_20 | 1407-1413 | WTO:0000021, funRiceGene:221 | denotes | growth |
| M_21 | 652-656 | funRiceGene:528 | denotes | salt |
| M_22 | 1318-1332 | funRiceGene:22, xzyao:11796 | denotes | drought stress |
| M_23 | 1684-1698 | funRiceGene:22, xzyao:11796 | denotes | drought stress |
| M_24 | 480-493 | funRiceGene:339, xzyao:16388 | denotes | abscisic acid |
| M_25 | 22-28 | funRiceGene:361 | denotes | stress |
| M_26 | 701-707 | funRiceGene:361 | denotes | stress |
| M_27 | 1326-1332 | funRiceGene:361 | denotes | stress |
| M_28 | 1692-1698 | funRiceGene:361 | denotes | stress |
| M_29 | 495-498 | funRiceGene:140 | denotes | ABA |
| M_30 | 564-575 | xzyao:15868 | denotes | the control |
| M_31 | 1190-1207 | xzyao:36337 | denotes | seed setting rate |
| M_32 | 1782-1801 | xzyao:38537 | denotes | genetic improvement |
| M_33 | 1318-1343 | xzyao:8190 | denotes | drought stress conditions |
| M_34 | 100-107 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_35 | 640-647 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_36 | 1049-1056 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_37 | 1318-1325 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_38 | 1684-1691 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_39 | 1805-1812 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_40 | 100-118 | funRiceGene:238, xzyao:8774 | denotes | drought resistance |
| M_41 | 1049-1067 | funRiceGene:238, xzyao:8774 | denotes | drought resistance |
| M_42 | 1805-1823 | funRiceGene:238, xzyao:8774 | denotes | drought resistance |
| M_43 | 1311-1325 | xzyao:24212 | denotes | severe drought |
| M_44 | 1357-1372 | xzyao:23108 | denotes | potential yield |
| M_45 | 1318-1333 | funRiceGene:411 | denotes | drought stress |
| M_46 | 1326-1343 | xzyao:35373 | denotes | stress conditions |
| M_47 | 652-665 | xzyao:27611 | denotes | salt stresses |
| M_48 | 1071-1089 | xzyao:5448 | denotes | reproductive stage |
| M_49 | 539-542 | hunflair:NA:Gene | denotes | GUS |
| M_50 | 716-719 | hunflair:NA:Gene | denotes | GUS |
| M_51 | 829-832 | hunflair:NA:Gene | denotes | GUS |
| M_52 | 1443-1455 | hunflair:NA:Gene | denotes | Chymotrypsin |
| M_53 | 959-961 | hunflair:NA:Species | denotes | cv |
| M_54 | 177-189 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_55 | 320-332 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_56 | 963-974 | hunflair:NA:CellLine | denotes | Zhonghua 11 |
| M_57 | 495-498 | hunflair:NA:Chemical | denotes | ABA |
| M_58 | 164-176 | hunflair:NA:Species | denotes | Oryza sativa |
| M_59 | 519-537 | hunflair:NA:Gene | denotes | beta-glucuronidase |
| M_60 | 480-493 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_61 | 40-50 | hunflair:NA:Gene | denotes | proteinase |
| M_62 | 122-126 | hunflair:NA:Species | denotes | rice |
| M_63 | 237-241 | hunflair:NA:Species | denotes | rice |
| M_64 | 611-615 | hunflair:NA:Species | denotes | rice |
| M_65 | 765-769 | hunflair:NA:Species | denotes | rice |
| M_66 | 1827-1831 | hunflair:NA:Species | denotes | rice |
| M_67 | 208-213 | hunflair:NA:Gene | denotes | OCPI1 |
| M_68 | 268-273 | hunflair:NA:Gene | denotes | OCPI1 |
| M_69 | 425-430 | hunflair:NA:Gene | denotes | OCPI1 |
| M_70 | 579-584 | hunflair:NA:Gene | denotes | OCPI1 |
| M_71 | 805-810 | hunflair:NA:Gene | denotes | OCPI1 |
| M_72 | 901-906 | hunflair:NA:Gene | denotes | OCPI1 |
| M_73 | 917-922 | hunflair:NA:Gene | denotes | OCPI1 |
| M_74 | 1123-1128 | hunflair:NA:Gene | denotes | OCPI1 |
| M_75 | 1741-1746 | hunflair:NA:Gene | denotes | OCPI1 |
| M_76 | 177-206 | hunflair:NA:Gene | denotes | chymotrypsin inhibitor-like 1 |
| M_77 | 480-493 | pubtator:MESH:D000040:Chemical | denotes | abscisic acid |
| M_78 | 455-466 | pubtator:MESH:D003681:Disease | denotes | dehydration |
| M_79 | 689-700 | pubtator:MESH:D003681:Disease | denotes | dehydration |
| M_80 | 164-176 | pubtator:4530:Species | denotes | Oryza sativa |
| M_81 | 122-126 | pubtator:4530:Species | denotes | rice |
| M_82 | 237-241 | pubtator:4530:Species | denotes | rice |
| M_83 | 611-615 | pubtator:4530:Species | denotes | rice |
| M_84 | 765-769 | pubtator:4530:Species | denotes | rice |
| M_85 | 1827-1831 | pubtator:4530:Species | denotes | rice |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 1326-1332 | funRiceGene:361 | denotes | stress |
| M_1 | 480-493 | funRiceGene:339, xzyao:8823 | denotes | abscisic acid |
| M_2 | 1071-1083 | funRiceGene:103 | denotes | reproductive |
| M_3 | 652-656 | funRiceGene:528 | denotes | salt |
| M_4 | 1174-1185 | funRiceGene:312, xzyao:11323 | denotes | grain yield |
| M_5 | 1180-1185 | funRiceGene:377 | denotes | yield |
| M_6 | 1367-1372 | funRiceGene:377 | denotes | yield |
| M_7 | 1318-1332 | funRiceGene:22, xzyao:11632 | denotes | drought stress |
| M_8 | 1407-1413 | WTO:0000021, funRiceGene:221 | denotes | growth |
| M_9 | 1049-1067 | funRiceGene:238, xzyao:8750 | denotes | drought resistance |
| M_10 | 1805-1823 | funRiceGene:238, xzyao:8750 | denotes | drought resistance |
| M_11 | 1180-1202 | xzyao:15962 | denotes | yield and seed setting |
| M_12 | 1174-1179 | funRiceGene:91 | denotes | grain |
| M_13 | 1057-1067 | funRiceGene:228 | denotes | resistance |
| M_14 | 1813-1823 | funRiceGene:228 | denotes | resistance |
| M_15 | 1190-1194 | PO:0009010, funRiceGene:180 | denotes | seed |
| M_16 | 785-801 | xzyao:7536 | denotes | reverse sequence |
| M_17 | 640-647 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_18 | 1049-1056 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_19 | 1318-1325 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_20 | 1684-1691 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_21 | 1805-1812 | WTO:0000218, funRiceGene:356 | denotes | drought |
| M_22 | 495-498 | hunflair:NA:Chemical | denotes | ABA |
| M_23 | 177-189 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_24 | 320-332 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_25 | 164-176 | hunflair:NA:Species | denotes | Oryza sativa |
| M_26 | 480-493 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_27 | 539-542 | hunflair:NA:Gene | denotes | GUS |
| M_28 | 716-719 | hunflair:NA:Gene | denotes | GUS |
| M_29 | 829-832 | hunflair:NA:Gene | denotes | GUS |
| M_30 | 519-537 | hunflair:NA:Gene | denotes | beta-glucuronidase |
| M_31 | 122-126 | hunflair:NA:Species | denotes | rice |
| M_32 | 237-241 | hunflair:NA:Species | denotes | rice |
| M_33 | 611-615 | hunflair:NA:Species | denotes | rice |
| M_34 | 765-769 | hunflair:NA:Species | denotes | rice |
| M_35 | 1827-1831 | hunflair:NA:Species | denotes | rice |
| M_36 | 208-213 | hunflair:NA:Gene | denotes | OCPI1 |
| M_37 | 268-273 | hunflair:NA:Gene | denotes | OCPI1 |
| M_38 | 425-430 | hunflair:NA:Gene | denotes | OCPI1 |
| M_39 | 579-584 | hunflair:NA:Gene | denotes | OCPI1 |
| M_40 | 805-810 | hunflair:NA:Gene | denotes | OCPI1 |
| M_41 | 901-906 | hunflair:NA:Gene | denotes | OCPI1 |
| M_42 | 917-922 | hunflair:NA:Gene | denotes | OCPI1 |
| M_43 | 1123-1128 | hunflair:NA:Gene | denotes | OCPI1 |
| M_44 | 1741-1746 | hunflair:NA:Gene | denotes | OCPI1 |
| M_45 | 1443-1455 | hunflair:NA:Gene | denotes | Chymotrypsin |
| M_46 | 40-50 | hunflair:NA:Gene | denotes | proteinase |
| M_47 | 959-961 | hunflair:NA:Species | denotes | cv |
| M_48 | 177-206 | hunflair:NA:Gene | denotes | chymotrypsin inhibitor-like 1 |
| M_49 | 963-974 | hunflair:NA:CellLine | denotes | Zhonghua 11 |
| M_50 | 164-176 | pubtator:4530:Species | denotes | Oryza sativa |
| M_51 | 455-466 | pubtator:MESH:D003681:Disease | denotes | dehydration |
| M_52 | 689-700 | pubtator:MESH:D003681:Disease | denotes | dehydration |
| M_53 | 480-493 | pubtator:MESH:D000040:Chemical | denotes | abscisic acid |
| M_54 | 122-126 | pubtator:4530:Species | denotes | rice |
| M_55 | 237-241 | pubtator:4530:Species | denotes | rice |
| M_56 | 611-615 | pubtator:4530:Species | denotes | rice |
| M_57 | 765-769 | pubtator:4530:Species | denotes | rice |
| M_58 | 1827-1831 | pubtator:4530:Species | denotes | rice |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 495-498 | http://identifiers.org/oryzabase.gene/6003 | denotes | ABA |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-60 | http://identifiers.org/oryzabase.gene/6254 | denotes | proteinase inhibitor |
| T2 | 205-206 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 495-498 | hunflair:NA:Chemical | denotes | ABA |
| M_1 | 164-176 | hunflair:NA:Species | denotes | Oryza sativa |
| M_2 | 177-189 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_3 | 320-332 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_4 | 519-537 | hunflair:NA:Gene | denotes | beta-glucuronidase |
| M_5 | 963-974 | hunflair:NA:CellLine | denotes | Zhonghua 11 |
| M_6 | 480-493 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_7 | 208-213 | hunflair:NA:Gene | denotes | OCPI1 |
| M_8 | 268-273 | hunflair:NA:Gene | denotes | OCPI1 |
| M_9 | 425-430 | hunflair:NA:Gene | denotes | OCPI1 |
| M_10 | 579-584 | hunflair:NA:Gene | denotes | OCPI1 |
| M_11 | 805-810 | hunflair:NA:Gene | denotes | OCPI1 |
| M_12 | 901-906 | hunflair:NA:Gene | denotes | OCPI1 |
| M_13 | 917-922 | hunflair:NA:Gene | denotes | OCPI1 |
| M_14 | 1123-1128 | hunflair:NA:Gene | denotes | OCPI1 |
| M_15 | 1741-1746 | hunflair:NA:Gene | denotes | OCPI1 |
| M_16 | 122-126 | hunflair:NA:Species | denotes | rice |
| M_17 | 237-241 | hunflair:NA:Species | denotes | rice |
| M_18 | 611-615 | hunflair:NA:Species | denotes | rice |
| M_19 | 765-769 | hunflair:NA:Species | denotes | rice |
| M_20 | 1827-1831 | hunflair:NA:Species | denotes | rice |
| M_21 | 1443-1455 | hunflair:NA:Gene | denotes | Chymotrypsin |
| M_22 | 539-542 | hunflair:NA:Gene | denotes | GUS |
| M_23 | 716-719 | hunflair:NA:Gene | denotes | GUS |
| M_24 | 829-832 | hunflair:NA:Gene | denotes | GUS |
| M_25 | 959-961 | hunflair:NA:Species | denotes | cv |
| M_26 | 40-50 | hunflair:NA:Gene | denotes | proteinase |
| M_27 | 177-206 | hunflair:NA:Gene | denotes | chymotrypsin inhibitor-like 1 |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-60 | http://identifiers.org/oryzabase.gene/6254 | denotes | proteinase inhibitor |
| T2 | 480-493 | http://identifiers.org/oryzabase.gene/8408 | denotes | abscisic acid |
| T3 | 495-498 | http://identifiers.org/oryzabase.gene/6003 | denotes | ABA |
| T4 | 495-498 | http://identifiers.org/oryzabase.gene/8408 | denotes | ABA |
| T5 | 652-656 | http://identifiers.org/oryzabase.gene/451 | denotes | salt |
| T6 | 652-656 | http://identifiers.org/oryzabase.gene/21170 | denotes | salt |
| T7 | 959-961 | http://identifiers.org/oryzabase.gene/22146 | denotes | cv |
| T8 | 1174-1185 | http://identifiers.org/oryzabase.gene/2034 | denotes | grain yield |
| T77113 | 480-493 | http://identifiers.org/ricegap/LOC_Os11g06720 | denotes | abscisic acid |
| T61804 | 495-498 | http://identifiers.org/ricegap/LOC_Os11g06720 | denotes | ABA |
| T35956 | 495-498 | http://identifiers.org/ricegap/LOC_Os04g34600 | denotes | ABA |
| T48309 | 495-498 | http://identifiers.org/ricegap/LOC_Os02g33820 | denotes | ABA |
| T12928 | 495-498 | http://identifiers.org/ricegap/LOC_Os01g73250 | denotes | ABA |
| T96452 | 495-498 | http://identifiers.org/ricegap/LOC_Os01g72910 | denotes | ABA |
| T41517 | 495-498 | http://identifiers.org/ricegap/LOC_Os01g72900 | denotes | ABA |
| T83462 | 652-656 | http://identifiers.org/ricegap/LOC_Os11g07450 | denotes | salt |
| T9 | 652-656 | http://identifiers.org/ricegap/LOC_Os01g24710 | denotes | salt |
| T10 | 959-961 | http://identifiers.org/ricegap/LOC_Os05g49940 | denotes | cv |
| T11 | 1174-1185 | http://identifiers.org/ricegap/LOC_Os08g07740 | denotes | grain yield |
| T41767 | 480-493 | http://identifiers.org/rapdb.locus/Os11g0167800 | denotes | abscisic acid |
| T4663 | 495-498 | http://identifiers.org/rapdb.locus/Os11g0167800 | denotes | ABA |
| T73085 | 495-498 | http://identifiers.org/rapdb.locus/Os04g0423400 | denotes | ABA |
| T38115 | 495-498 | http://identifiers.org/rapdb.locus/Os02g0543000 | denotes | ABA |
| T18552 | 495-498 | http://identifiers.org/rapdb.locus/Os01g0963600 | denotes | ABA |
| T15099 | 495-498 | http://identifiers.org/rapdb.locus/Os01g0959200 | denotes | ABA |
| T31224 | 495-498 | http://identifiers.org/rapdb.locus/Os01g0959100 | denotes | ABA |
| T76873 | 652-656 | http://identifiers.org/rapdb.locus/Os11g0175500 | denotes | salt |
| T59378 | 652-656 | http://identifiers.org/rapdb.locus/Os01g0348900 | denotes | salt |
| T19576 | 959-961 | http://identifiers.org/rapdb.locus/Os05g0575000 | denotes | cv |
| T97078 | 1174-1185 | http://identifiers.org/rapdb.locus/Os08g0174500 | denotes | grain yield |
| T55965 | 480-493 | http://identifiers.org/uniprot/Q53JF7 | denotes | abscisic acid |
| T7433 | 495-498 | http://identifiers.org/uniprot/Q53JF7 | denotes | ABA |
| T27282 | 652-656 | http://identifiers.org/uniprot/Q53PH3 | denotes | salt |
| T54557 | 652-656 | http://identifiers.org/uniprot/B9G9N6 | denotes | salt |
| M_0 | 495-498 | hunflair:NA:Chemical | denotes | ABA |
| M_1 | 164-176 | hunflair:NA:Species | denotes | Oryza sativa |
| M_2 | 177-189 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_3 | 320-332 | hunflair:NA:Gene | denotes | chymotrypsin |
| M_4 | 519-537 | hunflair:NA:Gene | denotes | beta-glucuronidase |
| M_5 | 963-974 | hunflair:NA:CellLine | denotes | Zhonghua 11 |
| M_6 | 480-493 | hunflair:NA:Chemical | denotes | abscisic acid |
| M_7 | 208-213 | hunflair:NA:Gene | denotes | OCPI1 |
| M_8 | 268-273 | hunflair:NA:Gene | denotes | OCPI1 |
| M_9 | 425-430 | hunflair:NA:Gene | denotes | OCPI1 |
| M_10 | 579-584 | hunflair:NA:Gene | denotes | OCPI1 |
| M_11 | 805-810 | hunflair:NA:Gene | denotes | OCPI1 |
| M_12 | 901-906 | hunflair:NA:Gene | denotes | OCPI1 |
| M_13 | 917-922 | hunflair:NA:Gene | denotes | OCPI1 |
| M_14 | 1123-1128 | hunflair:NA:Gene | denotes | OCPI1 |
| M_15 | 1741-1746 | hunflair:NA:Gene | denotes | OCPI1 |
| M_16 | 122-126 | hunflair:NA:Species | denotes | rice |
| M_17 | 237-241 | hunflair:NA:Species | denotes | rice |
| M_18 | 611-615 | hunflair:NA:Species | denotes | rice |
| M_19 | 765-769 | hunflair:NA:Species | denotes | rice |
| M_20 | 1827-1831 | hunflair:NA:Species | denotes | rice |
| M_21 | 1443-1455 | hunflair:NA:Gene | denotes | Chymotrypsin |
| M_22 | 539-542 | hunflair:NA:Gene | denotes | GUS |
| M_23 | 716-719 | hunflair:NA:Gene | denotes | GUS |
| M_24 | 829-832 | hunflair:NA:Gene | denotes | GUS |
| M_25 | 959-961 | hunflair:NA:Species | denotes | cv |
| M_26 | 40-50 | hunflair:NA:Gene | denotes | proteinase |
| M_27 | 177-206 | hunflair:NA:Gene | denotes | chymotrypsin inhibitor-like 1 |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 455-466 | HP_0001944 | denotes | dehydration |
| T2 | 689-700 | HP_0001944 | denotes | dehydration |
funRiceGenes-all
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PTO-all_T1 | 100-118 | http://purl.obolibrary.org/obo/TO_0000276 | denotes | drought resistance |
| PTO-all_T2 | 1049-1067 | http://purl.obolibrary.org/obo/TO_0000276 | denotes | drought resistance |
| PTO-all_T3 | 1190-1202 | http://purl.obolibrary.org/obo/TO_0000180 | denotes | seed setting |
| PTO-all_T4 | 1805-1823 | http://purl.obolibrary.org/obo/TO_0000276 | denotes | drought resistance |
funRiceGenes-exact
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PTO-exact_T1 | 100-118 | http://purl.obolibrary.org/obo/TO_0000276 | denotes | drought resistance |
| PTO-exact_T2 | 1049-1067 | http://purl.obolibrary.org/obo/TO_0000276 | denotes | drought resistance |
| PTO-exact_T3 | 1805-1823 | http://purl.obolibrary.org/obo/TO_0000276 | denotes | drought resistance |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-60 | gene | denotes | proteinase inhibitor |