PubMed:17172261 / 1377-1834
Annnotations
Glycosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T5 | 214-224 | Cell | denotes | lymphocyte | http://purl.obolibrary.org/obo/CL:0000542 |
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 72-86 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis X |
| T12 | 146-160 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis X |
| T13 | 285-307 | https://glytoucan.org/Structures/Glycans/G80722US | denotes | 6-sulfo sialyl Lewis X |
| T14 | 309-332 | https://glytoucan.org/Structures/Glycans/G80722US | denotes | 6'-Sulfo sialyl Lewis X |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T11 | 72-86 | Glycan_Motif | denotes | sialyl Lewis X | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T12 | 146-160 | Glycan_Motif | denotes | sialyl Lewis X | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00054MO |
| T13 | 285-307 | Glycan_Motif | denotes | 6-sulfo sialyl Lewis X | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G80722US |
| T14 | 309-332 | Glycan_Motif | denotes | 6'-Sulfo sialyl Lewis X | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G80722US |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 72-86 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis X |
| T7 | 146-160 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis X |
| T8 | 285-307 | http://www.glycoepitope.jp/epitopes/EP0014 | denotes | 6-sulfo sialyl Lewis X |
| T9 | 293-307 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis X |
| T10 | 309-332 | http://www.glycoepitope.jp/epitopes/EP0014 | denotes | 6'-Sulfo sialyl Lewis X |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T9 | 0-161 | Sentence | denotes | We then showed that overexpression of KSST suppresses the expression of sialyl Lewis X on Chinese hamster ovary (CHO) cells engineered to express sialyl Lewis X. |
| TextSentencer_T10 | 162-308 | Sentence | denotes | Moreover, KSST expression in those cells suppressed lymphocyte rolling compared with mock-transfected CHO cells expressing 6-sulfo sialyl Lewis X. |
| TextSentencer_T11 | 309-457 | Sentence | denotes | 6'-Sulfo sialyl Lewis X can neither be found in GlyCAM-1 from CHO cells expressing both KSST and FucT-VII nor be found in GlyCAM-1 from HEV of mice. |
| T9 | 0-457 | Sentence | denotes | We then showed that overexpression of KSST suppresses the expression of sialyl Lewis X on Chinese hamster ovary (CHO) cells engineered to express sialyl Lewis X. Moreover, KSST expression in those cells suppressed lymphocyte rolling compared with mock-transfected CHO cells expressing 6-sulfo sialyl Lewis X. 6'-Sulfo sialyl Lewis X can neither be found in GlyCAM-1 from CHO cells expressing both KSST and FucT-VII nor be found in GlyCAM-1 from HEV of mice. |
| T9 | 0-161 | Sentence | denotes | We then showed that overexpression of KSST suppresses the expression of sialyl Lewis X on Chinese hamster ovary (CHO) cells engineered to express sialyl Lewis X. |
| T10 | 162-308 | Sentence | denotes | Moreover, KSST expression in those cells suppressed lymphocyte rolling compared with mock-transfected CHO cells expressing 6-sulfo sialyl Lewis X. |
| T11 | 309-457 | Sentence | denotes | 6'-Sulfo sialyl Lewis X can neither be found in GlyCAM-1 from CHO cells expressing both KSST and FucT-VII nor be found in GlyCAM-1 from HEV of mice. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 72-86 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis X |
| T12 | 79-86 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis X |
| T13 | 146-160 | https://glytoucan.org/Structures/Glycans/G00054MO | denotes | sialyl Lewis X |
| T14 | 153-160 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis X |
| T15 | 285-307 | https://glytoucan.org/Structures/Glycans/G80722US | denotes | 6-sulfo sialyl Lewis X |
| T16 | 300-307 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis X |
| T17 | 309-332 | https://glytoucan.org/Structures/Glycans/G80722US | denotes | 6'-Sulfo sialyl Lewis X |
| T18 | 325-332 | https://glytoucan.org/Structures/Glycans/G00051MO | denotes | Lewis X |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 406-414 | http://www.uniprot.org/uniprot/Q11130 | denotes | FucT-VII |
| T16 | 357-365 | http://www.uniprot.org/uniprot/Q8IVK1 | denotes | GlyCAM-1 |
| T17 | 431-439 | http://www.uniprot.org/uniprot/Q8IVK1 | denotes | GlyCAM-1 |
| T20 | 38-42 | http://www.uniprot.org/uniprot/O43916 | denotes | KSST |
| T21 | 172-176 | http://www.uniprot.org/uniprot/O43916 | denotes | KSST |
| T22 | 397-401 | http://www.uniprot.org/uniprot/O43916 | denotes | KSST |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 406-414 | http://www.uniprot.org/uniprot/Q11131 | denotes | FucT-VII |
| T13 | 357-365 | http://www.uniprot.org/uniprot/Q02596 | denotes | GlyCAM-1 |
| T14 | 431-439 | http://www.uniprot.org/uniprot/Q02596 | denotes | GlyCAM-1 |
| T16 | 38-42 | http://www.uniprot.org/uniprot/Q9EQC0 | denotes | KSST |
| T17 | 172-176 | http://www.uniprot.org/uniprot/Q9EQC0 | denotes | KSST |
| T18 | 397-401 | http://www.uniprot.org/uniprot/Q9EQC0 | denotes | KSST |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 118-123 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T3 | 197-202 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T4 | 268-273 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T5 | 375-380 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10 | 406-410 | http://purl.obolibrary.org/obo/GO_0008424 | denotes | FucT |
| T14 | 72-78 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialyl |
| T15 | 146-152 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialyl |
| T16 | 293-299 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialyl |
| T22 | 113-116 | http://purl.obolibrary.org/obo/GO_0043848 | denotes | CHO |
| T23 | 264-267 | http://purl.obolibrary.org/obo/GO_0043848 | denotes | CHO |
| T24 | 371-374 | http://purl.obolibrary.org/obo/GO_0043848 | denotes | CHO |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 118-123 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T2 | 197-202 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T3 | 268-273 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T4 | 375-380 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T5 | 415-418 | http://purl.obolibrary.org/obo/GO_0005731 | denotes | nor |
GlycoBiology-Motifs
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 72-84 | http://rdf.glycoinfo.org/glycan/G00053MO | denotes | sialyl Lewis |
| T4 | 146-158 | http://rdf.glycoinfo.org/glycan/G00053MO | denotes | sialyl Lewis |
| T5 | 293-305 | http://rdf.glycoinfo.org/glycan/G00053MO | denotes | sialyl Lewis |
| T6 | 318-330 | http://rdf.glycoinfo.org/glycan/G00053MO | denotes | sialyl Lewis |
| T9 | 72-86 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sialyl Lewis X |
| T10 | 146-160 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sialyl Lewis X |
| T11 | 293-307 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sialyl Lewis X |
| T12 | 318-332 | http://rdf.glycoinfo.org/glycan/G00054MO | denotes | sialyl Lewis X |
| T15 | 79-84 | http://rdf.glycoinfo.org/glycan/G00047MO | denotes | Lewis |
| T16 | 153-158 | http://rdf.glycoinfo.org/glycan/G00047MO | denotes | Lewis |
| T17 | 300-305 | http://rdf.glycoinfo.org/glycan/G00047MO | denotes | Lewis |
| T18 | 325-330 | http://rdf.glycoinfo.org/glycan/G00047MO | denotes | Lewis |
| T21 | 79-86 | http://rdf.glycoinfo.org/glycan/G00051MO | denotes | Lewis X |
| T22 | 153-160 | http://rdf.glycoinfo.org/glycan/G00051MO | denotes | Lewis X |
| T23 | 300-307 | http://rdf.glycoinfo.org/glycan/G00051MO | denotes | Lewis X |
| T24 | 325-332 | http://rdf.glycoinfo.org/glycan/G00051MO | denotes | Lewis X |
GlycoBiology-Epitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-GlycoEpitope-B_T3 | 79-86 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis X |
| PD-GlycoEpitope-B_T4 | 153-160 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis X |
| PD-GlycoEpitope-B_T5 | 300-307 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis X |
| PD-GlycoEpitope-B_T6 | 325-332 | http://www.glycoepitope.jp/epitopes/EP0011 | denotes | Lewis X |
| PD-GlycoEpitope-B_T9 | 72-84 | http://www.glycoepitope.jp/epitopes/EP0008 | denotes | sialyl Lewis |
| PD-GlycoEpitope-B_T10 | 146-158 | http://www.glycoepitope.jp/epitopes/EP0008 | denotes | sialyl Lewis |
| PD-GlycoEpitope-B_T11 | 293-305 | http://www.glycoepitope.jp/epitopes/EP0008 | denotes | sialyl Lewis |
| PD-GlycoEpitope-B_T12 | 318-330 | http://www.glycoepitope.jp/epitopes/EP0008 | denotes | sialyl Lewis |
| PD-GlycoEpitope-B_T15 | 72-86 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis X |
| PD-GlycoEpitope-B_T16 | 146-160 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis X |
| PD-GlycoEpitope-B_T17 | 293-307 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis X |
| PD-GlycoEpitope-B_T18 | 318-332 | http://www.glycoepitope.jp/epitopes/EP0012 | denotes | sialyl Lewis X |
| PD-GlycoEpitope-B_T21 | 285-307 | http://www.glycoepitope.jp/epitopes/EP0014 | denotes | 6-sulfo sialyl Lewis X |
| PD-GlycoEpitope-B_T22 | 309-332 | http://www.glycoepitope.jp/epitopes/EP0014 | denotes | 6'-Sulfo sialyl Lewis X |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T5 | 90-105 | OrganismTaxon | denotes | Chinese hamster | 10029 |
| T6 | 452-456 | OrganismTaxon | denotes | mice | 10088 |
Glycosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T4 | 72-86 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sialyl Lewis X | http://www.glycoepitope.jp/epitopes/EP0012 |
| T5 | 146-160 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | sialyl Lewis X | http://www.glycoepitope.jp/epitopes/EP0012 |
| T6 | 285-307 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | 6-sulfo sialyl Lewis X | http://www.glycoepitope.jp/epitopes/EP0014 |
| T7 | 309-332 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | 6'-Sulfo sialyl Lewis X | http://www.glycoepitope.jp/epitopes/EP0014 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T9 | 106-111 | Body_part | denotes | ovary | http://purl.obolibrary.org/obo/UBERON_0000992 |
| T10 | 214-224 | Body_part | denotes | lymphocyte | http://purl.obolibrary.org/obo/CL_0000542 |
| T11 | 445-448 | Body_part | denotes | HEV | http://purl.obolibrary.org/obo/UBERON_8410037 |