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PubMed:17095532 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 505-511 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 1175-1181 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 505-511 Glycan_Motif denotes fucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO
T2 1175-1181 Glycan_Motif denotes fucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 505-511 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 1175-1181 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 138-145 HP_0012393 denotes allergy

ICD10

Id Subject Object Predicate Lexical cue
T1 138-145 http://purl.bioontology.org/ontology/ICD10/T78.4 denotes allergy

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 81-84 http://www.uniprot.org/uniprot/P49025 denotes Cit
T2 231-234 http://www.uniprot.org/uniprot/P49025 denotes Cit
T3 581-584 http://www.uniprot.org/uniprot/P49025 denotes Cit
T4 770-773 http://www.uniprot.org/uniprot/P49025 denotes Cit
T5 879-882 http://www.uniprot.org/uniprot/P49025 denotes Cit
T6 1302-1305 http://www.uniprot.org/uniprot/P49025 denotes Cit
T7 1483-1486 http://www.uniprot.org/uniprot/P49025 denotes Cit

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 127-134 http://purl.bioontology.org/ontology/NCBITAXON/311090 denotes history
T2 158-173 http://purl.bioontology.org/ontology/NCBITAXON/2711 denotes Citrus sinensis
T3 373-377 http://purl.bioontology.org/ontology/NCBITAXON/9973 denotes many
T4 812-820 http://purl.bioontology.org/ontology/NCBITAXON/871272 denotes parallel

GO-BP

Id Subject Object Predicate Lexical cue
T1 52-64 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylated
T2 648-661 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T3 1099-1112 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T4 1335-1348 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 101-105 http://purl.obolibrary.org/obo/GO_0004617 denotes sera
T6 363-367 http://purl.obolibrary.org/obo/GO_0004617 denotes Sera
T7 1012-1023 http://purl.obolibrary.org/obo/GO_0006412 denotes translation

GO-MF

Id Subject Object Predicate Lexical cue
T1 175-180 http://purl.obolibrary.org/obo/GO_0070026 denotes binds
T2 175-180 http://purl.obolibrary.org/obo/GO_0003680 denotes binds
T3 175-180 http://purl.obolibrary.org/obo/GO_0017091 denotes binds
T4 175-180 http://purl.obolibrary.org/obo/GO_0005488 denotes binds

GO-CC

Id Subject Object Predicate Lexical cue
T1 491-495 http://purl.obolibrary.org/obo/GO_0019013 denotes core

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-89 Sentence denotes Molecular and immunological characterization of the glycosylated orange allergen Cit s 1.
TextSentencer_T2 90-262 Sentence denotes The IgE of sera from patients with a history of allergy to oranges (Citrus sinensis) binds a number of proteins in orange extract, including Cit s 1, a germin-like protein.
TextSentencer_T3 263-362 Sentence denotes In the present study, we have analyzed its immunological cross-reactivity and its molecular nature.
TextSentencer_T4 363-531 Sentence denotes Sera from many of the patients examined recognize a range of glycoproteins and neoglycoconjugates containing beta1,2-xylose and core alpha1,3-fucose on their N-glycans.
TextSentencer_T5 532-808 Sentence denotes These reagents also inhibited the interaction of Cit s 1 with patients' sera, thus underlining the critical role of glycosylation in the recognition of this protein by patients' IgE and extending previous data showing that deglycosylated Cit s 1 does not possess IgE epitopes.
TextSentencer_T6 809-924 Sentence denotes In parallel, we examined the peptide sequence and glycan structure of Cit s 1, using mass spectrometric techniques.
TextSentencer_T7 925-1191 Sentence denotes Indeed, we achieved complete sequence coverage of the mature protein compared with the translation of an expressed sequence tag cDNA clone and demonstrated that the single N-glycosylation site of this protein carries oligosaccharides with xylose and fucose residues.
TextSentencer_T8 1192-1557 Sentence denotes Owing to the presumed requirement for multivalency for in vivo allergenicity, our molecular data showing that Cit s 1 is monovalent as regards glycosylation and that the single N-glycan is the target of the IgE response to this protein explain the immunological cross-reactive properties of Cit s 1 as well as its equivocal nature as a clinically relevant allergen.
T1 0-89 Sentence denotes Molecular and immunological characterization of the glycosylated orange allergen Cit s 1.
T2 90-262 Sentence denotes The IgE of sera from patients with a history of allergy to oranges (Citrus sinensis) binds a number of proteins in orange extract, including Cit s 1, a germin-like protein.
T3 263-362 Sentence denotes In the present study, we have analyzed its immunological cross-reactivity and its molecular nature.
T4 363-531 Sentence denotes Sera from many of the patients examined recognize a range of glycoproteins and neoglycoconjugates containing beta1,2-xylose and core alpha1,3-fucose on their N-glycans.
T5 532-808 Sentence denotes These reagents also inhibited the interaction of Cit s 1 with patients' sera, thus underlining the critical role of glycosylation in the recognition of this protein by patients' IgE and extending previous data showing that deglycosylated Cit s 1 does not possess IgE epitopes.
T6 809-924 Sentence denotes In parallel, we examined the peptide sequence and glycan structure of Cit s 1, using mass spectrometric techniques.
T7 925-1191 Sentence denotes Indeed, we achieved complete sequence coverage of the mature protein compared with the translation of an expressed sequence tag cDNA clone and demonstrated that the single N-glycosylation site of this protein carries oligosaccharides with xylose and fucose residues.
T8 1192-1557 Sentence denotes Owing to the presumed requirement for multivalency for in vivo allergenicity, our molecular data showing that Cit s 1 is monovalent as regards glycosylation and that the single N-glycan is the target of the IgE response to this protein explain the immunological cross-reactive properties of Cit s 1 as well as its equivocal nature as a clinically relevant allergen.
T1 0-89 Sentence denotes Molecular and immunological characterization of the glycosylated orange allergen Cit s 1.
T2 90-262 Sentence denotes The IgE of sera from patients with a history of allergy to oranges (Citrus sinensis) binds a number of proteins in orange extract, including Cit s 1, a germin-like protein.
T3 263-362 Sentence denotes In the present study, we have analyzed its immunological cross-reactivity and its molecular nature.
T4 363-531 Sentence denotes Sera from many of the patients examined recognize a range of glycoproteins and neoglycoconjugates containing beta1,2-xylose and core alpha1,3-fucose on their N-glycans.
T5 532-808 Sentence denotes These reagents also inhibited the interaction of Cit s 1 with patients' sera, thus underlining the critical role of glycosylation in the recognition of this protein by patients' IgE and extending previous data showing that deglycosylated Cit s 1 does not possess IgE epitopes.
T6 809-924 Sentence denotes In parallel, we examined the peptide sequence and glycan structure of Cit s 1, using mass spectrometric techniques.
T7 925-1191 Sentence denotes Indeed, we achieved complete sequence coverage of the mature protein compared with the translation of an expressed sequence tag cDNA clone and demonstrated that the single N-glycosylation site of this protein carries oligosaccharides with xylose and fucose residues.
T8 1192-1557 Sentence denotes Owing to the presumed requirement for multivalency for in vivo allergenicity, our molecular data showing that Cit s 1 is monovalent as regards glycosylation and that the single N-glycan is the target of the IgE response to this protein explain the immunological cross-reactive properties of Cit s 1 as well as its equivocal nature as a clinically relevant allergen.

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 521-530 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T2 1369-1377 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycan

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 138-145 Disease denotes allergy http://purl.obolibrary.org/obo/MONDO_0005271

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 138-145 Phenotype denotes allergy HP:0012393

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 158-173 OrganismTaxon denotes Citrus sinensis 2711