PubMed:17081044 JSONTXT

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    sentences

    {"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":128},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":129,"end":265},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":266,"end":453},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":454,"end":616},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":617,"end":741},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":742,"end":908},"obj":"Sentence"},{"id":"TextSentencer_T7","span":{"begin":909,"end":1072},"obj":"Sentence"},{"id":"TextSentencer_T8","span":{"begin":1073,"end":1201},"obj":"Sentence"},{"id":"TextSentencer_T9","span":{"begin":1202,"end":1376},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":128},"obj":"Sentence"},{"id":"T2","span":{"begin":129,"end":265},"obj":"Sentence"},{"id":"T3","span":{"begin":266,"end":453},"obj":"Sentence"},{"id":"T4","span":{"begin":454,"end":616},"obj":"Sentence"},{"id":"T5","span":{"begin":617,"end":741},"obj":"Sentence"},{"id":"T6","span":{"begin":742,"end":908},"obj":"Sentence"},{"id":"T7","span":{"begin":909,"end":1072},"obj":"Sentence"},{"id":"T8","span":{"begin":1073,"end":1201},"obj":"Sentence"},{"id":"T9","span":{"begin":1202,"end":1376},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Multiplexed mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}

    PubmedHPO

    {"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":238,"end":259},"obj":"HP_0001658"},{"id":"T2","span":{"begin":536,"end":543},"obj":"HP_0011034"}],"text":"Multiplexed mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}

    GlyCosmos600-FMA

    {"project":"GlyCosmos600-FMA","denotations":[{"id":"T1","span":{"begin":530,"end":535},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma63083"}],"text":"Multiplexed mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}

    DisGeNET5_gene_disease

    {"project":"DisGeNET5_gene_disease","denotations":[{"id":"17081044-3#113#126#gene7276","span":{"begin":567,"end":580},"obj":"gene7276"},{"id":"17081044-3#82#89#diseaseC0002726","span":{"begin":536,"end":543},"obj":"diseaseC0002726"},{"id":"17081044-3#159#161#diseaseC0027051","span":{"begin":613,"end":615},"obj":"diseaseC0027051"}],"relations":[{"id":"113#126#gene727682#89#diseaseC0002726","pred":"associated_with","subj":"17081044-3#113#126#gene7276","obj":"17081044-3#82#89#diseaseC0002726"},{"id":"113#126#gene7276159#161#diseaseC0027051","pred":"associated_with","subj":"17081044-3#113#126#gene7276","obj":"17081044-3#159#161#diseaseC0027051"}],"text":"Multiplexed mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}

    GlyCosmos600-GlycoProteins

    {"project":"GlyCosmos600-GlycoProteins","denotations":[{"id":"PD-GlycoProteins-B_T1","span":{"begin":567,"end":580},"obj":"https://acgg.asia/db/gpdb/id/GPDB0003303"},{"id":"PD-GlycoProteins-B_T2","span":{"begin":567,"end":580},"obj":"https://acgg.asia/db/gpdb/id/GPDB0005322"},{"id":"PD-GlycoProteins-B_T3","span":{"begin":567,"end":580},"obj":"https://acgg.asia/db/gpdb/id/GPDB0007383"}],"text":"Multiplexed mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}

    pubmed-enju-pas

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mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}

    HP-phenotype

    {"project":"HP-phenotype","denotations":[{"id":"T1","span":{"begin":109,"end":127},"obj":"Phenotype"},{"id":"T2","span":{"begin":238,"end":259},"obj":"Phenotype"},{"id":"T3","span":{"begin":261,"end":263},"obj":"Phenotype"},{"id":"T4","span":{"begin":613,"end":615},"obj":"Phenotype"},{"id":"T5","span":{"begin":738,"end":740},"obj":"Phenotype"},{"id":"T6","span":{"begin":886,"end":888},"obj":"Phenotype"},{"id":"T7","span":{"begin":980,"end":982},"obj":"Phenotype"},{"id":"T8","span":{"begin":1001,"end":1003},"obj":"Phenotype"}],"attributes":[{"id":"A1","pred":"hp_id","subj":"T1","obj":"HP:0001658"},{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0001658"},{"id":"A3","pred":"hp_id","subj":"T3","obj":"HP:0001658"},{"id":"A4","pred":"hp_id","subj":"T4","obj":"HP:0001658"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"HP:0001658"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"HP:0001658"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"HP:0001658"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"HP:0001658"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}],"text":"Multiplexed mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}

    mondo_disease

    {"project":"mondo_disease","denotations":[{"id":"T1","span":{"begin":109,"end":127},"obj":"Disease"},{"id":"T2","span":{"begin":238,"end":259},"obj":"Disease"},{"id":"T3","span":{"begin":261,"end":263},"obj":"Disease"},{"id":"T4","span":{"begin":536,"end":543},"obj":"Disease"},{"id":"T5","span":{"begin":613,"end":615},"obj":"Disease"},{"id":"T6","span":{"begin":738,"end":740},"obj":"Disease"},{"id":"T7","span":{"begin":886,"end":888},"obj":"Disease"},{"id":"T8","span":{"begin":980,"end":982},"obj":"Disease"},{"id":"T9","span":{"begin":1001,"end":1003},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/MONDO_0019065"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"},{"id":"A6","pred":"mondo_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0005068"}],"text":"Multiplexed mass spectrometric immunoassay in biomarker research: a novel approach to the determination of a myocardial infarct.\nReported here is the development of a multiplexed mass spectrometric immunoassay (MSIA) for the detection of myocardial infarction (MI). The assay is the product of a study that systematically progresses from biomarker discovery--to identification and verification--to assay design, data analysis, and statistical challenge. During targeted population proteomics investigations, two novel biomarkers, serum amyloid A1alpha and S-sulfated transthyretin, were found to be responsive to MI. These putative markers were subsequently screened in larger cohorts of individuals to verify their responsiveness toward MI. Upon verification, a multiplexed assay was designed that was capable of simultaneously monitoring the new markers plus a previously established MI-marker (myoglobin). The multiplexed MSIA was applied to two 96-sample sets comprised of 48-MI/48-healthy and 19-MI/77-healthy, which served as training and case cohorts, respectively. Data evaluation using either preset reference levels or multivariate analysis exhibited sensitivities and specificities of \u003e97%. These findings illustrate the importance of using systematic approaches in clinical proteomics to discover biomarkers and produce high-performance assays relevant to disease."}