PubMed:17059407
Annnotations
pqqtest_sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 942-962 | xzyao:10729 | denotes | indole 3-acetic acid |
| M_1 | 198-219 | xzyao:43599 | denotes | polar auxin transport |
| M_2 | 98-109 | WTO:0000011, funRiceGene:359 | denotes | development |
| M_3 | 111-122 | WTO:0000011, funRiceGene:359 | denotes | Development |
| M_4 | 818-829 | WTO:0000011, funRiceGene:359 | denotes | development |
| M_5 | 1427-1454 | xzyao:25884 | denotes | auxin-dependent root growth |
| M_6 | 805-829 | xzyao:23619 | denotes | lateral root development |
| M_7 | 1167-1178 | xzyao:14309 | denotes | A. thaliana |
| M_8 | 93-97 | PO:0009005, funRiceGene:362 | denotes | root |
| M_9 | 813-817 | PO:0009005, funRiceGene:362 | denotes | root |
| M_10 | 843-847 | PO:0009005, funRiceGene:362 | denotes | root |
| M_11 | 1443-1447 | PO:0009005, funRiceGene:362 | denotes | root |
| M_12 | 964-967 | funRiceGene:5 | denotes | IAA |
| M_13 | 805-817 | PO:0020121, funRiceGene:24 | denotes | lateral root |
| M_14 | 835-847 | PO:0020121, funRiceGene:24 | denotes | lateral root |
| M_15 | 1448-1454 | WTO:0000021, funRiceGene:221 | denotes | growth |
| M_16 | 55-60 | funRiceGene:285 | denotes | auxin |
| M_17 | 204-209 | funRiceGene:285 | denotes | auxin |
| M_18 | 285-290 | funRiceGene:285 | denotes | auxin |
| M_19 | 402-407 | funRiceGene:285 | denotes | auxin |
| M_20 | 615-620 | funRiceGene:285 | denotes | auxin |
| M_21 | 901-906 | funRiceGene:285 | denotes | auxin |
| M_22 | 1179-1184 | funRiceGene:285 | denotes | auxin |
| M_23 | 1241-1246 | funRiceGene:285 | denotes | auxin |
| M_24 | 1382-1387 | funRiceGene:285 | denotes | auxin |
| M_25 | 1427-1432 | funRiceGene:285 | denotes | auxin |
| M_26 | 1443-1454 | funRiceGene:109, xzyao:44526 | denotes | root growth |
| M_27 | 848-857 | WTO:0000005 | denotes | phenotype |
| M_28 | 1341-1369 | xzyao:16849 | denotes | vesicle trafficking pathways |
| M_29 | 69-88 | xzyao:9779 | denotes | vesicle trafficking |
| M_30 | 1111-1130 | xzyao:9779 | denotes | vesicle trafficking |
| M_31 | 1341-1360 | xzyao:9779 | denotes | vesicle trafficking |
| M_32 | 204-219 | funRiceGene:46, xzyao:28029 | denotes | auxin transport |
| M_33 | 93-109 | funRiceGene:290, xzyao:16748 | denotes | root development |
| M_34 | 813-829 | funRiceGene:290, xzyao:16748 | denotes | root development |
| M_35 | 918-929 | xzyao:38475 | denotes | acetic acid |
| M_36 | 951-962 | xzyao:38475 | denotes | acetic acid |
| M_37 | 159-173 | xzyao:22006 | denotes | monocot plants |
| M_38 | 55-67 | xzyao:24261 | denotes | auxin influx |
| M_39 | 285-297 | xzyao:24261 | denotes | auxin influx |
| M_40 | 615-627 | xzyao:24261 | denotes | auxin influx |
| M_41 | 1382-1394 | xzyao:24261 | denotes | auxin influx |
| M_42 | 843-857 | xzyao:18715 | denotes | root phenotype |
| M_43 | 326-337 | xzyao:8888 | denotes | model dicot |
| M_44 | 326-343 | xzyao:40465 | denotes | model dicot plant |
| M_45 | 568-581 | xzyao:16100 | denotes | small GTPases |
| M_46 | 964-967 | funRiceGene:407 | denotes | IAA |
| M_47 | 964-967 | hunflair:NA:Chemical | denotes | IAA |
| M_48 | 975-1006 | hunflair:NA:Chemical | denotes | 2,4-dichloro-phenoxyacetic acid |
| M_49 | 344-364 | hunflair:NA:Species | denotes | Arabidopsis thaliana |
| M_50 | 706-735 | hunflair:NA:Gene | denotes | ARF-GTPase-activating protein |
| M_51 | 487-497 | hunflair:NA:Chemical | denotes | nucleotide |
| M_52 | 471-475 | hunflair:NA:Gene | denotes | GNOM |
| M_53 | 30-37 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_54 | 737-744 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_55 | 942-962 | hunflair:NA:Chemical | denotes | indole 3-acetic acid |
| M_56 | 515-518 | hunflair:NA:Gene | denotes | GEF |
| M_57 | 479-513 | hunflair:NA:Gene | denotes | guanine-nucleotide exchange factor |
| M_58 | 479-486 | hunflair:NA:Chemical | denotes | guanine |
| M_59 | 1167-1178 | hunflair:NA:Species | denotes | A. thaliana |
| M_60 | 568-581 | hunflair:NA:Gene | denotes | small GTPases |
| M_61 | 149-154 | hunflair:NA:Species | denotes | dicot |
| M_62 | 332-337 | hunflair:NA:Species | denotes | dicot |
| M_63 | 436-447 | hunflair:NA:Gene | denotes | PIN-FORMED1 |
| M_64 | 749-753 | hunflair:NA:Species | denotes | rice |
| M_65 | 19-25 | hunflair:NA:Gene | denotes | OsAGAP |
| M_66 | 695-701 | hunflair:NA:Gene | denotes | OsAGAP |
| M_67 | 1062-1068 | hunflair:NA:Gene | denotes | OsAGAP |
| M_68 | 1300-1306 | hunflair:NA:Gene | denotes | OsAGAP |
| M_69 | 159-166 | hunflair:NA:Species | denotes | monocot |
| M_70 | 1200-1204 | hunflair:NA:Gene | denotes | AUX1 |
| M_71 | 907-929 | hunflair:NA:Chemical | denotes | 1-naphthyl acetic acid |
| M_72 | 449-453 | hunflair:NA:Gene | denotes | PIN1 |
| M_73 | 55-60 | hunflair:NA:Chemical | denotes | auxin |
| M_74 | 204-209 | hunflair:NA:Chemical | denotes | auxin |
| M_75 | 285-290 | hunflair:NA:Chemical | denotes | auxin |
| M_76 | 402-407 | hunflair:NA:Chemical | denotes | auxin |
| M_77 | 615-620 | hunflair:NA:Chemical | denotes | auxin |
| M_78 | 901-906 | hunflair:NA:Chemical | denotes | auxin |
| M_79 | 1179-1184 | hunflair:NA:Chemical | denotes | auxin |
| M_80 | 1241-1246 | hunflair:NA:Chemical | denotes | auxin |
| M_81 | 1382-1387 | hunflair:NA:Chemical | denotes | auxin |
| M_82 | 1427-1432 | hunflair:NA:Chemical | denotes | auxin |
| M_83 | 221-224 | hunflair:NA:Gene | denotes | PAT |
| M_84 | 764-767 | hunflair:NA:Gene | denotes | PAT |
| M_85 | 528-531 | hunflair:NA:Chemical | denotes | ADP |
| M_86 | 344-364 | pubtator:3702:Species | denotes | Arabidopsis thaliana |
| M_87 | 471-475 | pubtator:837958:Gene | denotes | GNOM |
| M_88 | 942-962 | pubtator:MESH:C030737:Chemical | denotes | indole 3-acetic acid |
| M_89 | 528-531 | pubtator:MESH:D000244:Chemical | denotes | ADP |
| M_90 | 1167-1178 | pubtator:3702:Species | denotes | A. thaliana |
| M_91 | 975-1006 | pubtator:MESH:C415326:Chemical | denotes | 2,4-dichloro-phenoxyacetic acid |
| M_92 | 907-929 | pubtator:MESH:D019342:Chemical | denotes | 1-naphthyl acetic acid |
| M_93 | 436-447 | pubtator:843693:Gene | denotes | PIN-FORMED1 |
| M_94 | 449-453 | pubtator:843693:Gene | denotes | PIN1 |
| M_95 | 749-753 | pubtator:4530:Species | denotes | rice |
| M_96 | 1200-1204 | pubtator:818390:Gene | denotes | AUX1 |
| M_97 | 479-497 | pubtator:MESH:D006150:Chemical | denotes | guanine-nucleotide |
| M_98 | 964-967 | pubtator:MESH:C068520:Chemical | denotes | IAA |
21k_plant_trait_mention
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 848-857 | WTO:0000005 | denotes | phenotype |
| M_1 | 805-817 | PO:0020121, funRiceGene:24, xzyao:17174 | denotes | lateral root |
| M_2 | 835-847 | PO:0020121, funRiceGene:24, xzyao:17174 | denotes | lateral root |
| M_3 | 204-219 | funRiceGene:46, xzyao:3481 | denotes | auxin transport |
| M_4 | 1448-1454 | WTO:0000021, funRiceGene:221 | denotes | growth |
| M_5 | 1443-1454 | funRiceGene:109, xzyao:7040 | denotes | root growth |
| M_6 | 843-857 | xzyao:7915 | denotes | root phenotype |
| M_7 | 111-122 | WTO:0000011, funRiceGene:359 | denotes | Development |
| M_8 | 204-209 | funRiceGene:285 | denotes | auxin |
| M_9 | 285-290 | funRiceGene:285 | denotes | auxin |
| M_10 | 402-407 | funRiceGene:285 | denotes | auxin |
| M_11 | 615-620 | funRiceGene:285 | denotes | auxin |
| M_12 | 901-906 | funRiceGene:285 | denotes | auxin |
| M_13 | 1241-1246 | funRiceGene:285 | denotes | auxin |
| M_14 | 1382-1387 | funRiceGene:285 | denotes | auxin |
| M_15 | 813-817 | PO:0009005, funRiceGene:362 | denotes | root |
| M_16 | 843-847 | PO:0009005, funRiceGene:362 | denotes | root |
| M_17 | 1443-1447 | PO:0009005, funRiceGene:362 | denotes | root |
| M_18 | 332-355 | xzyao:3975 | denotes | dicot plant Arabidopsis |
| M_19 | 159-166 | hunflair:NA:Species | denotes | monocot |
| M_20 | 55-60 | hunflair:NA:Chemical | denotes | auxin |
| M_21 | 204-209 | hunflair:NA:Chemical | denotes | auxin |
| M_22 | 285-290 | hunflair:NA:Chemical | denotes | auxin |
| M_23 | 402-407 | hunflair:NA:Chemical | denotes | auxin |
| M_24 | 615-620 | hunflair:NA:Chemical | denotes | auxin |
| M_25 | 901-906 | hunflair:NA:Chemical | denotes | auxin |
| M_26 | 1179-1184 | hunflair:NA:Chemical | denotes | auxin |
| M_27 | 1241-1246 | hunflair:NA:Chemical | denotes | auxin |
| M_28 | 1382-1387 | hunflair:NA:Chemical | denotes | auxin |
| M_29 | 1427-1432 | hunflair:NA:Chemical | denotes | auxin |
| M_30 | 942-962 | hunflair:NA:Chemical | denotes | indole 3-acetic acid |
| M_31 | 221-224 | hunflair:NA:Gene | denotes | PAT |
| M_32 | 764-767 | hunflair:NA:Gene | denotes | PAT |
| M_33 | 568-581 | hunflair:NA:Gene | denotes | small GTPases |
| M_34 | 1167-1178 | hunflair:NA:Species | denotes | A. thaliana |
| M_35 | 479-513 | hunflair:NA:Gene | denotes | guanine-nucleotide exchange factor |
| M_36 | 149-154 | hunflair:NA:Species | denotes | dicot |
| M_37 | 332-337 | hunflair:NA:Species | denotes | dicot |
| M_38 | 706-735 | hunflair:NA:Gene | denotes | ARF-GTPase-activating protein |
| M_39 | 471-475 | hunflair:NA:Gene | denotes | GNOM |
| M_40 | 907-929 | hunflair:NA:Chemical | denotes | 1-naphthyl acetic acid |
| M_41 | 19-25 | hunflair:NA:Gene | denotes | OsAGAP |
| M_42 | 695-701 | hunflair:NA:Gene | denotes | OsAGAP |
| M_43 | 1062-1068 | hunflair:NA:Gene | denotes | OsAGAP |
| M_44 | 1300-1306 | hunflair:NA:Gene | denotes | OsAGAP |
| M_45 | 528-531 | hunflair:NA:Chemical | denotes | ADP |
| M_46 | 487-497 | hunflair:NA:Chemical | denotes | nucleotide |
| M_47 | 479-486 | hunflair:NA:Chemical | denotes | guanine |
| M_48 | 436-447 | hunflair:NA:Gene | denotes | PIN-FORMED1 |
| M_49 | 449-453 | hunflair:NA:Gene | denotes | PIN1 |
| M_50 | 964-967 | hunflair:NA:Chemical | denotes | IAA |
| M_51 | 344-364 | hunflair:NA:Species | denotes | Arabidopsis thaliana |
| M_52 | 749-753 | hunflair:NA:Species | denotes | rice |
| M_53 | 515-518 | hunflair:NA:Gene | denotes | GEF |
| M_54 | 30-37 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_55 | 737-744 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_56 | 1200-1204 | hunflair:NA:Gene | denotes | AUX1 |
| M_57 | 975-1006 | hunflair:NA:Chemical | denotes | 2,4-dichloro-phenoxyacetic acid |
| M_58 | 479-497 | pubtator:MESH:D006150:Chemical | denotes | guanine-nucleotide |
| M_59 | 1167-1178 | pubtator:3702:Species | denotes | A. thaliana |
| M_60 | 1200-1204 | pubtator:818390:Gene | denotes | AUX1 |
| M_61 | 449-453 | pubtator:843693:Gene | denotes | PIN1 |
| M_62 | 942-962 | pubtator:MESH:C030737:Chemical | denotes | indole 3-acetic acid |
| M_63 | 907-929 | pubtator:MESH:D019342:Chemical | denotes | 1-naphthyl acetic acid |
| M_64 | 344-364 | pubtator:3702:Species | denotes | Arabidopsis thaliana |
| M_65 | 964-967 | pubtator:MESH:C068520:Chemical | denotes | IAA |
| M_66 | 975-1006 | pubtator:MESH:C415326:Chemical | denotes | 2,4-dichloro-phenoxyacetic acid |
| M_67 | 528-531 | pubtator:MESH:D000244:Chemical | denotes | ADP |
| M_68 | 436-447 | pubtator:843693:Gene | denotes | PIN-FORMED1 |
| M_69 | 749-753 | pubtator:4530:Species | denotes | rice |
| M_70 | 471-475 | pubtator:837958:Gene | denotes | GNOM |
OryzaGP_2021_v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 19-25 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T2 | 30-33 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T3 | 34-37 | http://identifiers.org/oryzabase.gene/23334 | denotes | GAP |
| T4 | 221-224 | http://identifiers.org/oryzabase.gene/18360 | denotes | PAT |
| T5 | 436-439 | http://identifiers.org/oryzabase.gene/6254 | denotes | PIN |
| T6 | 449-453 | http://identifiers.org/oryzabase.gene/590 | denotes | PIN1 |
| T7 | 553-556 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T8 | 695-701 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T9 | 706-709 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T10 | 737-740 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T11 | 741-744 | http://identifiers.org/oryzabase.gene/23334 | denotes | GAP |
| T12 | 764-767 | http://identifiers.org/oryzabase.gene/18360 | denotes | PAT |
| T13 | 1062-1068 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T14 | 1200-1204 | http://identifiers.org/oryzabase.gene/11916 | denotes | AUX1 |
| T15 | 1300-1306 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T35962 | 30-33 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T53667 | 34-37 | http://identifiers.org/rapdb.locus/Os07g0500300 | denotes | GAP |
| T6035 | 221-224 | http://identifiers.org/rapdb.locus/Os01g0898500 | denotes | PAT |
| T57030 | 553-556 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T2353 | 706-709 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T73783 | 737-740 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T33098 | 741-744 | http://identifiers.org/rapdb.locus/Os07g0500300 | denotes | GAP |
| T40222 | 764-767 | http://identifiers.org/rapdb.locus/Os01g0898500 | denotes | PAT |
| T63971 | 1200-1204 | http://identifiers.org/rapdb.locus/Os01g0856500 | denotes | AUX1 |
OryzaGP_2022
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 528-551 | http://identifiers.org/oryzabase.gene/15753 | denotes | ADP-ribosylation factor |
| T2 | 706-735 | http://identifiers.org/oryzabase.gene/6084 | denotes | ARF-GTPase-activating protein |
| T3 | 907-908 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
OryzaGP_2021_FLAIR
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| M_0 | 149-154 | hunflair:NA:Species | denotes | dicot |
| M_1 | 332-337 | hunflair:NA:Species | denotes | dicot |
| M_2 | 30-37 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_3 | 737-744 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_4 | 975-1006 | hunflair:NA:Chemical | denotes | 2,4-dichloro-phenoxyacetic acid |
| M_5 | 344-364 | hunflair:NA:Species | denotes | Arabidopsis thaliana |
| M_6 | 1167-1178 | hunflair:NA:Species | denotes | A. thaliana |
| M_7 | 221-224 | hunflair:NA:Gene | denotes | PAT |
| M_8 | 764-767 | hunflair:NA:Gene | denotes | PAT |
| M_9 | 907-929 | hunflair:NA:Chemical | denotes | 1-naphthyl acetic acid |
| M_10 | 528-531 | hunflair:NA:Chemical | denotes | ADP |
| M_11 | 515-518 | hunflair:NA:Gene | denotes | GEF |
| M_12 | 749-753 | hunflair:NA:Species | denotes | rice |
| M_13 | 479-486 | hunflair:NA:Chemical | denotes | guanine |
| M_14 | 449-453 | hunflair:NA:Gene | denotes | PIN1 |
| M_15 | 19-25 | hunflair:NA:Gene | denotes | OsAGAP |
| M_16 | 695-701 | hunflair:NA:Gene | denotes | OsAGAP |
| M_17 | 1062-1068 | hunflair:NA:Gene | denotes | OsAGAP |
| M_18 | 1300-1306 | hunflair:NA:Gene | denotes | OsAGAP |
| M_19 | 487-497 | hunflair:NA:Chemical | denotes | nucleotide |
| M_20 | 436-447 | hunflair:NA:Gene | denotes | PIN-FORMED1 |
| M_21 | 55-60 | hunflair:NA:Chemical | denotes | auxin |
| M_22 | 204-209 | hunflair:NA:Chemical | denotes | auxin |
| M_23 | 285-290 | hunflair:NA:Chemical | denotes | auxin |
| M_24 | 402-407 | hunflair:NA:Chemical | denotes | auxin |
| M_25 | 615-620 | hunflair:NA:Chemical | denotes | auxin |
| M_26 | 901-906 | hunflair:NA:Chemical | denotes | auxin |
| M_27 | 1179-1184 | hunflair:NA:Chemical | denotes | auxin |
| M_28 | 1241-1246 | hunflair:NA:Chemical | denotes | auxin |
| M_29 | 1382-1387 | hunflair:NA:Chemical | denotes | auxin |
| M_30 | 1427-1432 | hunflair:NA:Chemical | denotes | auxin |
| M_31 | 479-513 | hunflair:NA:Gene | denotes | guanine-nucleotide exchange factor |
| M_32 | 471-475 | hunflair:NA:Gene | denotes | GNOM |
| M_33 | 964-967 | hunflair:NA:Chemical | denotes | IAA |
| M_34 | 568-581 | hunflair:NA:Gene | denotes | small GTPases |
| M_35 | 706-735 | hunflair:NA:Gene | denotes | ARF-GTPase-activating protein |
| M_36 | 159-166 | hunflair:NA:Species | denotes | monocot |
| M_37 | 1200-1204 | hunflair:NA:Gene | denotes | AUX1 |
| M_38 | 942-962 | hunflair:NA:Chemical | denotes | indole 3-acetic acid |
OryzaGP_2021
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 19-25 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T2 | 30-33 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T3 | 34-37 | http://identifiers.org/oryzabase.gene/23334 | denotes | GAP |
| T4 | 221-224 | http://identifiers.org/oryzabase.gene/18360 | denotes | PAT |
| T5 | 436-439 | http://identifiers.org/oryzabase.gene/6254 | denotes | PIN |
| T6 | 449-453 | http://identifiers.org/oryzabase.gene/590 | denotes | PIN1 |
| T7 | 528-551 | http://identifiers.org/oryzabase.gene/15753 | denotes | ADP-ribosylation factor |
| T8 | 553-556 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T9 | 568-573 | http://identifiers.org/oryzabase.gene/11165 | denotes | small |
| T10 | 695-701 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T11 | 706-735 | http://identifiers.org/oryzabase.gene/6084 | denotes | ARF-GTPase-activating protein |
| T12 | 706-709 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T13 | 737-740 | http://identifiers.org/oryzabase.gene/15753 | denotes | ARF |
| T14 | 741-744 | http://identifiers.org/oryzabase.gene/23334 | denotes | GAP |
| T15 | 764-767 | http://identifiers.org/oryzabase.gene/18360 | denotes | PAT |
| T16 | 1062-1068 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T17 | 1200-1204 | http://identifiers.org/oryzabase.gene/11916 | denotes | AUX1 |
| T18 | 1300-1306 | http://identifiers.org/oryzabase.gene/6084 | denotes | OsAGAP |
| T90270 | 30-33 | http://identifiers.org/ricegap/LOC_Os05g41060 | denotes | ARF |
| T57202 | 34-37 | http://identifiers.org/ricegap/LOC_Os07g31720 | denotes | GAP |
| T41966 | 221-224 | http://identifiers.org/ricegap/LOC_Os01g67310 | denotes | PAT |
| T52877 | 528-551 | http://identifiers.org/ricegap/LOC_Os05g41060 | denotes | ADP-ribosylation factor |
| T59754 | 553-556 | http://identifiers.org/ricegap/LOC_Os05g41060 | denotes | ARF |
| T71758 | 568-573 | http://identifiers.org/ricegap/LOC_Os02g34850 | denotes | small |
| T20256 | 706-709 | http://identifiers.org/ricegap/LOC_Os05g41060 | denotes | ARF |
| T62872 | 710-735 | http://identifiers.org/ricegap/LOC_Os03g63710 | denotes | GTPase-activating protein |
| T5125 | 737-740 | http://identifiers.org/ricegap/LOC_Os05g41060 | denotes | ARF |
| T14170 | 741-744 | http://identifiers.org/ricegap/LOC_Os07g31720 | denotes | GAP |
| T30363 | 764-767 | http://identifiers.org/ricegap/LOC_Os01g67310 | denotes | PAT |
| T98579 | 1200-1204 | http://identifiers.org/ricegap/LOC_Os01g63770 | denotes | AUX1 |
| T13035 | 30-33 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T79525 | 34-37 | http://identifiers.org/rapdb.locus/Os07g0500300 | denotes | GAP |
| T84556 | 221-224 | http://identifiers.org/rapdb.locus/Os01g0898500 | denotes | PAT |
| T60330 | 528-551 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ADP-ribosylation factor |
| T96470 | 553-556 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T86682 | 568-573 | http://identifiers.org/rapdb.locus/Os02g0554000 | denotes | small |
| T41236 | 706-709 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T92736 | 710-735 | http://identifiers.org/rapdb.locus/Os03g0854100 | denotes | GTPase-activating protein |
| T45687 | 737-740 | http://identifiers.org/rapdb.locus/Os05g0489600 | denotes | ARF |
| T58772 | 741-744 | http://identifiers.org/rapdb.locus/Os07g0500300 | denotes | GAP |
| T73464 | 764-767 | http://identifiers.org/rapdb.locus/Os01g0898500 | denotes | PAT |
| T32414 | 1200-1204 | http://identifiers.org/rapdb.locus/Os01g0856500 | denotes | AUX1 |
| T29517 | 30-33 | http://identifiers.org/uniprot/Q76ME3 | denotes | ARF |
| T2582 | 34-37 | http://identifiers.org/uniprot/Q69RN2 | denotes | GAP |
| T14884 | 221-224 | http://identifiers.org/uniprot/Q29VI1 | denotes | PAT |
| T93111 | 528-551 | http://identifiers.org/uniprot/Q76ME3 | denotes | ADP-ribosylation factor |
| T13934 | 553-556 | http://identifiers.org/uniprot/Q76ME3 | denotes | ARF |
| T24816 | 706-709 | http://identifiers.org/uniprot/Q76ME3 | denotes | ARF |
| T17588 | 710-735 | http://identifiers.org/refseq/NP_001149824.1 | denotes | GTPase-activating protein |
| T40487 | 737-740 | http://identifiers.org/uniprot/Q76ME3 | denotes | ARF |
| T9608 | 741-744 | http://identifiers.org/uniprot/Q69RN2 | denotes | GAP |
| T67565 | 764-767 | http://identifiers.org/uniprot/Q29VI1 | denotes | PAT |
| T6719 | 1200-1204 | http://identifiers.org/uniprot/Q5N892 | denotes | AUX1 |
| T8018 | 1200-1204 | http://identifiers.org/refseq/NP_001151566.1 | denotes | AUX1 |
| M_0 | 149-154 | hunflair:NA:Species | denotes | dicot |
| M_1 | 332-337 | hunflair:NA:Species | denotes | dicot |
| M_2 | 30-37 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_3 | 737-744 | hunflair:NA:Gene | denotes | ARF-GAP |
| M_4 | 975-1006 | hunflair:NA:Chemical | denotes | 2,4-dichloro-phenoxyacetic acid |
| M_5 | 344-364 | hunflair:NA:Species | denotes | Arabidopsis thaliana |
| M_6 | 1167-1178 | hunflair:NA:Species | denotes | A. thaliana |
| M_7 | 221-224 | hunflair:NA:Gene | denotes | PAT |
| M_8 | 764-767 | hunflair:NA:Gene | denotes | PAT |
| M_9 | 907-929 | hunflair:NA:Chemical | denotes | 1-naphthyl acetic acid |
| M_10 | 528-531 | hunflair:NA:Chemical | denotes | ADP |
| M_11 | 515-518 | hunflair:NA:Gene | denotes | GEF |
| M_12 | 749-753 | hunflair:NA:Species | denotes | rice |
| M_13 | 479-486 | hunflair:NA:Chemical | denotes | guanine |
| M_14 | 449-453 | hunflair:NA:Gene | denotes | PIN1 |
| M_15 | 19-25 | hunflair:NA:Gene | denotes | OsAGAP |
| M_16 | 695-701 | hunflair:NA:Gene | denotes | OsAGAP |
| M_17 | 1062-1068 | hunflair:NA:Gene | denotes | OsAGAP |
| M_18 | 1300-1306 | hunflair:NA:Gene | denotes | OsAGAP |
| M_19 | 487-497 | hunflair:NA:Chemical | denotes | nucleotide |
| M_20 | 436-447 | hunflair:NA:Gene | denotes | PIN-FORMED1 |
| M_21 | 55-60 | hunflair:NA:Chemical | denotes | auxin |
| M_22 | 204-209 | hunflair:NA:Chemical | denotes | auxin |
| M_23 | 285-290 | hunflair:NA:Chemical | denotes | auxin |
| M_24 | 402-407 | hunflair:NA:Chemical | denotes | auxin |
| M_25 | 615-620 | hunflair:NA:Chemical | denotes | auxin |
| M_26 | 901-906 | hunflair:NA:Chemical | denotes | auxin |
| M_27 | 1179-1184 | hunflair:NA:Chemical | denotes | auxin |
| M_28 | 1241-1246 | hunflair:NA:Chemical | denotes | auxin |
| M_29 | 1382-1387 | hunflair:NA:Chemical | denotes | auxin |
| M_30 | 1427-1432 | hunflair:NA:Chemical | denotes | auxin |
| M_31 | 479-513 | hunflair:NA:Gene | denotes | guanine-nucleotide exchange factor |
| M_32 | 471-475 | hunflair:NA:Gene | denotes | GNOM |
| M_33 | 964-967 | hunflair:NA:Chemical | denotes | IAA |
| M_34 | 568-581 | hunflair:NA:Gene | denotes | small GTPases |
| M_35 | 706-735 | hunflair:NA:Gene | denotes | ARF-GTPase-activating protein |
| M_36 | 159-166 | hunflair:NA:Species | denotes | monocot |
| M_37 | 1200-1204 | hunflair:NA:Gene | denotes | AUX1 |
| M_38 | 942-962 | hunflair:NA:Chemical | denotes | indole 3-acetic acid |
OryzaGP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 19-25 | gene | denotes | OsAGAP |
| T2 | 449-453 | gene | denotes | PIN1 |
| T3 | 528-551 | gene | denotes | ADP-ribosylation factor |
| T4 | 695-701 | gene | denotes | OsAGAP |
| T5 | 714-735 | gene | denotes | se-activating protein |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-110 | Sentence | denotes | Over-expression of OsAGAP, an ARF-GAP, interferes with auxin influx, vesicle trafficking and root development. |
| T2 | 111-318 | Sentence | denotes | Development and organogenesis in both dicot and monocot plants are highly dependent on polar auxin transport (PAT), which requires the proper asymmetric localization of both auxin influx and efflux carriers. |
| T3 | 319-656 | Sentence | denotes | In the model dicot plant Arabidopsis thaliana, the trafficking and localization of auxin efflux facilitators such as PIN-FORMED1 (PIN1) are mediated by GNOM, a guanine-nucleotide exchange factor (GEF) for the ADP-ribosylation factor (ARF) family of small GTPases, but molecular regulators of the auxin influx facilitators remain unknown. |
| T4 | 657-830 | Sentence | denotes | Here, we show that over-expression of OsAGAP, an ARF-GTPase-activating protein (ARF-GAP) in rice, impaired PAT and interfered with both primary and lateral root development. |
| T5 | 831-1061 | Sentence | denotes | The lateral root phenotype could be rescued by the membrane-permeable auxin 1-naphthyl acetic acid, but not by indole 3-acetic acid (IAA) or by 2,4-dichloro-phenoxyacetic acid, which require influx facilitators to enter the cells. |
| T6 | 1062-1267 | Sentence | denotes | OsAGAP-over-expressing plants had alterations in vesicle trafficking and localization of the presumptive A. thaliana auxin-influx carrier AUX1, but not in the localization of the auxin efflux facilitators. |
| T7 | 1268-1465 | Sentence | denotes | Together, our data suggest that OsAGAP has a specific role in regulating vesicle trafficking pathways such as the auxin influx pathway, which in turn controls auxin-dependent root growth in plants. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-110 | Sentence | denotes | Over-expression of OsAGAP, an ARF-GAP, interferes with auxin influx, vesicle trafficking and root development. |
| T2 | 111-318 | Sentence | denotes | Development and organogenesis in both dicot and monocot plants are highly dependent on polar auxin transport (PAT), which requires the proper asymmetric localization of both auxin influx and efflux carriers. |
| T3 | 319-656 | Sentence | denotes | In the model dicot plant Arabidopsis thaliana, the trafficking and localization of auxin efflux facilitators such as PIN-FORMED1 (PIN1) are mediated by GNOM, a guanine-nucleotide exchange factor (GEF) for the ADP-ribosylation factor (ARF) family of small GTPases, but molecular regulators of the auxin influx facilitators remain unknown. |
| T4 | 657-830 | Sentence | denotes | Here, we show that over-expression of OsAGAP, an ARF-GTPase-activating protein (ARF-GAP) in rice, impaired PAT and interfered with both primary and lateral root development. |
| T5 | 831-1061 | Sentence | denotes | The lateral root phenotype could be rescued by the membrane-permeable auxin 1-naphthyl acetic acid, but not by indole 3-acetic acid (IAA) or by 2,4-dichloro-phenoxyacetic acid, which require influx facilitators to enter the cells. |
| T6 | 1062-1267 | Sentence | denotes | OsAGAP-over-expressing plants had alterations in vesicle trafficking and localization of the presumptive A. thaliana auxin-influx carrier AUX1, but not in the localization of the auxin efflux facilitators. |
| T7 | 1268-1465 | Sentence | denotes | Together, our data suggest that OsAGAP has a specific role in regulating vesicle trafficking pathways such as the auxin influx pathway, which in turn controls auxin-dependent root growth in plants. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-110 | Sentence | denotes | Over-expression of OsAGAP, an ARF-GAP, interferes with auxin influx, vesicle trafficking and root development. |
| T2 | 111-318 | Sentence | denotes | Development and organogenesis in both dicot and monocot plants are highly dependent on polar auxin transport (PAT), which requires the proper asymmetric localization of both auxin influx and efflux carriers. |
| T3 | 319-656 | Sentence | denotes | In the model dicot plant Arabidopsis thaliana, the trafficking and localization of auxin efflux facilitators such as PIN-FORMED1 (PIN1) are mediated by GNOM, a guanine-nucleotide exchange factor (GEF) for the ADP-ribosylation factor (ARF) family of small GTPases, but molecular regulators of the auxin influx facilitators remain unknown. |
| T4 | 657-830 | Sentence | denotes | Here, we show that over-expression of OsAGAP, an ARF-GTPase-activating protein (ARF-GAP) in rice, impaired PAT and interfered with both primary and lateral root development. |
| T5 | 831-1061 | Sentence | denotes | The lateral root phenotype could be rescued by the membrane-permeable auxin 1-naphthyl acetic acid, but not by indole 3-acetic acid (IAA) or by 2,4-dichloro-phenoxyacetic acid, which require influx facilitators to enter the cells. |
| T6 | 1062-1267 | Sentence | denotes | OsAGAP-over-expressing plants had alterations in vesicle trafficking and localization of the presumptive A. thaliana auxin-influx carrier AUX1, but not in the localization of the auxin efflux facilitators. |
| T7 | 1268-1465 | Sentence | denotes | Together, our data suggest that OsAGAP has a specific role in regulating vesicle trafficking pathways such as the auxin influx pathway, which in turn controls auxin-dependent root growth in plants. |
Oryza_sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-110 | Sentence | denotes | Over-expression of OsAGAP, an ARF-GAP, interferes with auxin influx, vesicle trafficking and root development. |
| T2 | 111-318 | Sentence | denotes | Development and organogenesis in both dicot and monocot plants are highly dependent on polar auxin transport (PAT), which requires the proper asymmetric localization of both auxin influx and efflux carriers. |
| T3 | 319-656 | Sentence | denotes | In the model dicot plant Arabidopsis thaliana, the trafficking and localization of auxin efflux facilitators such as PIN-FORMED1 (PIN1) are mediated by GNOM, a guanine-nucleotide exchange factor (GEF) for the ADP-ribosylation factor (ARF) family of small GTPases, but molecular regulators of the auxin influx facilitators remain unknown. |
| T4 | 657-830 | Sentence | denotes | Here, we show that over-expression of OsAGAP, an ARF-GTPase-activating protein (ARF-GAP) in rice, impaired PAT and interfered with both primary and lateral root development. |
| T5 | 831-1061 | Sentence | denotes | The lateral root phenotype could be rescued by the membrane-permeable auxin 1-naphthyl acetic acid, but not by indole 3-acetic acid (IAA) or by 2,4-dichloro-phenoxyacetic acid, which require influx facilitators to enter the cells. |
| T6 | 1062-1267 | Sentence | denotes | OsAGAP-over-expressing plants had alterations in vesicle trafficking and localization of the presumptive A. thaliana auxin-influx carrier AUX1, but not in the localization of the auxin efflux facilitators. |
| T7 | 1268-1465 | Sentence | denotes | Together, our data suggest that OsAGAP has a specific role in regulating vesicle trafficking pathways such as the auxin influx pathway, which in turn controls auxin-dependent root growth in plants. |