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PubMed:17033686 / 0-192 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-115 Sentence denotes A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
3446 32-37 GeneOrGeneProduct denotes PQBP1 NCBIGene:10084
3447 62-76 DiseaseOrPhenotypicFeature denotes microphthalmia MESH:D008850
3448 78-90 DiseaseOrPhenotypicFeature denotes microcephaly MESH:D008831
3449 96-114 DiseaseOrPhenotypicFeature denotes mental retardation MESH:D008607
3450 116-143 DiseaseOrPhenotypicFeature denotes X-linked mental retardation MESH:D038901

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 62-76 DiseaseOrPhenotypicFeature denotes microphthalmia 0021129
T2 78-90 DiseaseOrPhenotypicFeature denotes microcephaly 0001149

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 6-10 GeneOrGeneProduct denotes base
T2 11-15 GeneOrGeneProduct denotes pair
T3 32-37 GeneOrGeneProduct denotes PQBP1
T4 62-76 GeneOrGeneProduct denotes microphthalmia
T5 116-124 GeneOrGeneProduct denotes X-linked
T6 180-189 GeneOrGeneProduct denotes syndromic

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 32-37 GeneOrGeneProduct denotes PQBP1
T2 62-76 GeneOrGeneProduct denotes microphthalmia
T3 116-124 GeneOrGeneProduct denotes X-linked

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 62-76 DiseaseOrPhenotypicFeature denotes microphthalmia D008850
T2 78-90 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T3 96-114 DiseaseOrPhenotypicFeature denotes mental retardation D008607
T4 116-143 DiseaseOrPhenotypicFeature denotes X-linked mental retardation D038901
T5 180-189 DiseaseOrPhenotypicFeature denotes syndromic D013577

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 32-37 GeneOrGeneProduct denotes PQBP1

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 62-76 DiseaseOrPhenotypicFeature denotes microphthalmia 0021129
T2 78-90 DiseaseOrPhenotypicFeature denotes microcephaly 0001149
T3 96-114 DiseaseOrPhenotypicFeature denotes mental retardation 0001071
T4 125-143 DiseaseOrPhenotypicFeature denotes mental retardation 0001071

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 62-76 DiseaseOrPhenotypicFeature denotes microphthalmia D008850
T2 78-90 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T3 96-114 DiseaseOrPhenotypicFeature denotes mental retardation D008607
T4 116-143 DiseaseOrPhenotypicFeature denotes X-linked mental retardation D038901

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 62-76 DiseaseOrPhenotypicFeature denotes microphthalmia D008850
T2 78-90 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T3 96-114 DiseaseOrPhenotypicFeature denotes mental retardation D008607
T4 116-143 DiseaseOrPhenotypicFeature denotes X-linked mental retardation D038901

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T1 32-37 GeneOrGeneProduct denotes PQBP1
T30956 116-143 DiseaseOrPhenotypicFeature denotes X-linked mental retardation D038901
T12538 96-114 DiseaseOrPhenotypicFeature denotes mental retardation D008607
T61537 78-90 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T21811 62-76 DiseaseOrPhenotypicFeature denotes microphthalmia D008850

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-115 Sentence denotes A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation.
T1 0-115 Sentence denotes A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation.

DisGeNET

Id Subject Object Predicate Lexical cue
T1 116-143 disease:C1136249 denotes X-linked mental retardation
T3 116-143 disease:C1136249 denotes X-linked mental retardation
T5 116-143 disease:C1136249 denotes X-linked mental retardation

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 116-124 HP_0001417 denotes X-linked
T2 125-143 HP_0001249 denotes mental retardation

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
17033686-0#32#37#gene10084 32-37 gene10084 denotes PQBP1
17033686-0#96#114#diseaseC0025362 96-114 diseaseC0025362 denotes mental retardation
17033686-0#96#114#diseaseC3714756 96-114 diseaseC3714756 denotes mental retardation
17033686-0#62#76#diseaseC0026010 62-76 diseaseC0026010 denotes microphthalmia
17033686-1#0#27#diseaseC1136249 116-143 diseaseC1136249 denotes X-linked mental retardation
32#37#gene1008496#114#diseaseC0025362 17033686-0#32#37#gene10084 17033686-0#96#114#diseaseC0025362 associated_with PQBP1,mental retardation
32#37#gene1008496#114#diseaseC3714756 17033686-0#32#37#gene10084 17033686-0#96#114#diseaseC3714756 associated_with PQBP1,mental retardation
32#37#gene1008462#76#diseaseC0026010 17033686-0#32#37#gene10084 17033686-0#62#76#diseaseC0026010 associated_with PQBP1,microphthalmia

PubCasesHPO

Id Subject Object Predicate Lexical cue
TI1 62-76 HP:0000568 denotes microphthalmia
TI2 78-90 HP:0000252 denotes microcephaly