PubMed:17033686 / 0-115
Annnotations
LitCoin-sentences
{"project":"LitCoin-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":115},"obj":"Sentence"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-entities
{"project":"LitCoin-entities","denotations":[{"id":"3446","span":{"begin":32,"end":37},"obj":"GeneOrGeneProduct"},{"id":"3447","span":{"begin":62,"end":76},"obj":"DiseaseOrPhenotypicFeature"},{"id":"3448","span":{"begin":78,"end":90},"obj":"DiseaseOrPhenotypicFeature"},{"id":"3449","span":{"begin":96,"end":114},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"db_id","subj":"3446","obj":"NCBIGene:10084"},{"id":"A2","pred":"db_id","subj":"3447","obj":"MESH:D008850"},{"id":"A3","pred":"db_id","subj":"3448","obj":"MESH:D008831"},{"id":"A4","pred":"db_id","subj":"3449","obj":"MESH:D008607"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin_Mondo
{"project":"LitCoin_Mondo","denotations":[{"id":"T1","span":{"begin":62,"end":76},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":78,"end":90},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0021129"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"0001149"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-GeneOrGeneProduct-v0
{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T1","span":{"begin":6,"end":10},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":11,"end":15},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":32,"end":37},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":62,"end":76},"obj":"GeneOrGeneProduct"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-GeneOrGeneProduct-v2
{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T1","span":{"begin":32,"end":37},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":62,"end":76},"obj":"GeneOrGeneProduct"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-Disease-MeSH
{"project":"LitCoin-Disease-MeSH","denotations":[{"id":"T1","span":{"begin":62,"end":76},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":78,"end":90},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":96,"end":114},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"originalLabel","subj":"T1","obj":"D008850"},{"id":"A2","pred":"originalLabel","subj":"T2","obj":"D008831"},{"id":"A3","pred":"originalLabel","subj":"T3","obj":"D008607"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-GeneOrGeneProduct-v3
{"project":"LitCoin-GeneOrGeneProduct-v3","denotations":[{"id":"T1","span":{"begin":32,"end":37},"obj":"GeneOrGeneProduct"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin_Mondo_095
{"project":"LitCoin_Mondo_095","denotations":[{"id":"T1","span":{"begin":62,"end":76},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":78,"end":90},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":96,"end":114},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0021129"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"0001149"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"0001071"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-MeSH-Disease-2
{"project":"LitCoin-MeSH-Disease-2","denotations":[{"id":"T1","span":{"begin":62,"end":76},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":78,"end":90},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":96,"end":114},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"ID:","subj":"T1","obj":"D008850"},{"id":"A2","pred":"ID:","subj":"T2","obj":"D008831"},{"id":"A3","pred":"ID:","subj":"T3","obj":"D008607"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-MONDO_bioort2019
{"project":"LitCoin-MONDO_bioort2019","denotations":[{"id":"T1","span":{"begin":62,"end":76},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":78,"end":90},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":96,"end":114},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"#label","subj":"T1","obj":"D008850"},{"id":"A2","pred":"#label","subj":"T2","obj":"D008831"},{"id":"A3","pred":"#label","subj":"T3","obj":"D008607"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
LitCoin-training-merged
{"project":"LitCoin-training-merged","denotations":[{"id":"T1","span":{"begin":32,"end":37},"obj":"GeneOrGeneProduct"},{"id":"T12538","span":{"begin":96,"end":114},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T61537","span":{"begin":78,"end":90},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T21811","span":{"begin":62,"end":76},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A3","pred":"#label","subj":"T12538","obj":"D008607"},{"id":"A2","pred":"#label","subj":"T61537","obj":"D008831"},{"id":"A1","pred":"#label","subj":"T21811","obj":"D008850"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
sentences
{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":115},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":115},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
DisGeNET5_gene_disease
{"project":"DisGeNET5_gene_disease","denotations":[{"id":"17033686-0#32#37#gene10084","span":{"begin":32,"end":37},"obj":"gene10084"},{"id":"17033686-0#96#114#diseaseC0025362","span":{"begin":96,"end":114},"obj":"diseaseC0025362"},{"id":"17033686-0#96#114#diseaseC3714756","span":{"begin":96,"end":114},"obj":"diseaseC3714756"},{"id":"17033686-0#62#76#diseaseC0026010","span":{"begin":62,"end":76},"obj":"diseaseC0026010"}],"relations":[{"id":"32#37#gene1008496#114#diseaseC0025362","pred":"associated_with","subj":"17033686-0#32#37#gene10084","obj":"17033686-0#96#114#diseaseC0025362"},{"id":"32#37#gene1008496#114#diseaseC3714756","pred":"associated_with","subj":"17033686-0#32#37#gene10084","obj":"17033686-0#96#114#diseaseC3714756"},{"id":"32#37#gene1008462#76#diseaseC0026010","pred":"associated_with","subj":"17033686-0#32#37#gene10084","obj":"17033686-0#62#76#diseaseC0026010"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}
PubCasesHPO
{"project":"PubCasesHPO","denotations":[{"id":"TI1","span":{"begin":62,"end":76},"obj":"HP:0000568"},{"id":"TI2","span":{"begin":78,"end":90},"obj":"HP:0000252"}],"text":"A two base pair deletion in the PQBP1 gene is associated with microphthalmia, microcephaly, and mental retardation."}