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GlyCosmos15-Species

Id Subject Object Predicate Lexical cue db_id
2 0-5 Species denotes Chick 9031
23 200-205 Species denotes chick 9031
25 240-243 Species denotes rat 10116
26 319-324 Species denotes chick 9031
33 1401-1404 Species denotes rat 10116

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 16-27 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T2 335-346 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T3 635-646 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT
T4 772-783 Glycan_Motif denotes chondroitin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G43702JT

sentences

Id Subject Object Predicate Lexical cue
T1 0-62 Sentence denotes Chick cartilage chondroitin sulfate proteoglycan core protein.
T2 63-66 Sentence denotes II.
T3 67-139 Sentence denotes Nucleotide sequence of cDNA clone and localization of the S103L epitope.
T4 140-368 Sentence denotes A lambda gt11 expression library containing cDNA from total chick embryo was screened with S103L, a rat monoclonal antibody which reacts specifically with the core protein of the chick cartilage chondroitin sulfate proteoglycan.
T5 369-467 Sentence denotes One clone was identified which produced a 220-kDa beta-galactosidase/S103L-binding fusion protein.
T6 468-662 Sentence denotes Sequencing the entire 1.5-kilobase cDNA insert showed that it contained a single open reading frame, which encoded a portion of the proteoglycan core protein from the chondroitin sulfate domain.
T7 663-830 Sentence denotes This was confirmed by comparison with amino acid sequence data from peptide CS-B, which was derived from the chondroitin sulfate domain (Krueger, R.C., Jr., Fields, T.
T8 831-881 Sentence denotes A., Hildreth, J., IV, and Schwartz, N.B. (1990) J.
T9 882-887 Sentence denotes Biol.
T10 888-893 Sentence denotes Chem.
T11 894-912 Sentence denotes 265, 12075-12087).
T12 913-1083 Sentence denotes Furthermore, the 3' end of the insert overlapped with 23 bases at the 5' end of the published sequence for the C-terminal globular domain (Sai, S., Tanaka, T., Kosher, R.
T13 1084-1102 Sentence denotes A., and Tanzer, M.
T14 1103-1118 Sentence denotes L. (1986) Proc.
T15 1119-1124 Sentence denotes Natl.
T16 1125-1130 Sentence denotes Acad.
T17 1131-1135 Sentence denotes Sci.
T18 1136-1138 Sentence denotes U.
T19 1139-1141 Sentence denotes S.
T20 1142-1144 Sentence denotes A.
T21 1145-1238 Sentence denotes 83, 5081-5085), which oriented this clone, as well as the CS peptide, along the protein core.
T22 1239-1465 Sentence denotes The cDNA insert hybridized with a 9-kilobase mRNA from sternal chondrocytes as well as a similar sized message in brain but did not hybridize to any message from rat chondrosarcoma or from undifferentiated limb bud mesenchyme.
T23 1466-1709 Sentence denotes In further studies, the fusion protein as well as a cyanogen bromide fragment (70 kDa) derived from it were isolated and shown to react with S103L, indicating that cleavage at methionine residues does not disrupt the antibody recognition site.
T24 1710-1940 Sentence denotes Purification and N-terminal sequencing of the antigenic CNBr fragment derived from the fusion protein revealed that its N terminus is preceded by a methionine in the fusion protein and overlaps with the N terminus of peptide CS-B.
T25 1941-2283 Sentence denotes As peptide CS-B is not recognized by S103L and the C terminus of peptide CS-B lies beyond the proteoglycan portion of the antigenic CNBr fragment, the S103L epitope is either contained within the 11 amino acids preceding the N terminus of peptide CS-B or it spans the clostripain cleavage site at the origin of the N terminus of peptide CS-B.
T1 0-62 Sentence denotes Chick cartilage chondroitin sulfate proteoglycan core protein.
T2 63-66 Sentence denotes II.
T3 67-139 Sentence denotes Nucleotide sequence of cDNA clone and localization of the S103L epitope.
T4 140-368 Sentence denotes A lambda gt11 expression library containing cDNA from total chick embryo was screened with S103L, a rat monoclonal antibody which reacts specifically with the core protein of the chick cartilage chondroitin sulfate proteoglycan.
T5 369-467 Sentence denotes One clone was identified which produced a 220-kDa beta-galactosidase/S103L-binding fusion protein.
T6 468-662 Sentence denotes Sequencing the entire 1.5-kilobase cDNA insert showed that it contained a single open reading frame, which encoded a portion of the proteoglycan core protein from the chondroitin sulfate domain.
T7 663-830 Sentence denotes This was confirmed by comparison with amino acid sequence data from peptide CS-B, which was derived from the chondroitin sulfate domain (Krueger, R.C., Jr., Fields, T.
T8 831-881 Sentence denotes A., Hildreth, J., IV, and Schwartz, N.B. (1990) J.
T9 882-887 Sentence denotes Biol.
T10 888-893 Sentence denotes Chem.
T11 894-912 Sentence denotes 265, 12075-12087).
T12 913-1083 Sentence denotes Furthermore, the 3' end of the insert overlapped with 23 bases at the 5' end of the published sequence for the C-terminal globular domain (Sai, S., Tanaka, T., Kosher, R.
T13 1084-1102 Sentence denotes A., and Tanzer, M.
T14 1103-1118 Sentence denotes L. (1986) Proc.
T15 1119-1124 Sentence denotes Natl.
T16 1125-1130 Sentence denotes Acad.
T17 1131-1135 Sentence denotes Sci.
T18 1136-1138 Sentence denotes U.
T19 1139-1141 Sentence denotes S.
T20 1142-1144 Sentence denotes A.
T21 1145-1238 Sentence denotes 83, 5081-5085), which oriented this clone, as well as the CS peptide, along the protein core.
T22 1239-1465 Sentence denotes The cDNA insert hybridized with a 9-kilobase mRNA from sternal chondrocytes as well as a similar sized message in brain but did not hybridize to any message from rat chondrosarcoma or from undifferentiated limb bud mesenchyme.
T23 1466-1709 Sentence denotes In further studies, the fusion protein as well as a cyanogen bromide fragment (70 kDa) derived from it were isolated and shown to react with S103L, indicating that cleavage at methionine residues does not disrupt the antibody recognition site.
T24 1710-1940 Sentence denotes Purification and N-terminal sequencing of the antigenic CNBr fragment derived from the fusion protein revealed that its N terminus is preceded by a methionine in the fusion protein and overlaps with the N terminus of peptide CS-B.
T25 1941-2283 Sentence denotes As peptide CS-B is not recognized by S103L and the C terminus of peptide CS-B lies beyond the proteoglycan portion of the antigenic CNBr fragment, the S103L epitope is either contained within the 11 amino acids preceding the N terminus of peptide CS-B or it spans the clostripain cleavage site at the origin of the N terminus of peptide CS-B.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 16-27 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T2 335-346 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T3 635-646 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin
T4 772-783 https://glytoucan.org/Structures/Glycans/G43702JT denotes chondroitin

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 16-27 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T2 335-346 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T3 635-646 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin
T4 772-783 http://www.glycoepitope.jp/epitopes/EP0081 denotes chondroitin

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 6-15 http://purl.obolibrary.org/obo/MAT_0000189 denotes cartilage
T2 206-212 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo
T3 325-334 http://purl.obolibrary.org/obo/MAT_0000189 denotes cartilage
T4 1353-1358 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T5 1445-1449 http://purl.obolibrary.org/obo/MAT_0000090 denotes limb

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 16-27 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 335-346 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 635-646 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 772-783 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 739-743 Disease denotes CS-B http://purl.obolibrary.org/obo/MONDO_0019570
T2 1405-1419 Disease denotes chondrosarcoma http://purl.obolibrary.org/obo/MONDO_0008977
T3 1935-1939 Disease denotes CS-B http://purl.obolibrary.org/obo/MONDO_0019570
T4 1952-1956 Disease denotes CS-B http://purl.obolibrary.org/obo/MONDO_0019570
T5 2014-2018 Disease denotes CS-B http://purl.obolibrary.org/obo/MONDO_0019570
T6 2188-2192 Disease denotes CS-B http://purl.obolibrary.org/obo/MONDO_0019570
T7 2278-2282 Disease denotes CS-B http://purl.obolibrary.org/obo/MONDO_0019570

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 1081-1085 Phenotype denotes R. A HP:0001370
T2 1405-1419 Phenotype denotes chondrosarcoma HP:0006765

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 16-27 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T2 335-346 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T3 635-646 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT
T4 772-783 Glycan denotes chondroitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G43702JT

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 16-27 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 335-346 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T3 635-646 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 772-783 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T1 1405-1419 Phenotype denotes chondrosarcoma HP:0006765

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 6-15 Body_part denotes cartilage http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844
T3 142-148 Body_part denotes lambda http://purl.obolibrary.org/obo/UBERON_0013424
T4 206-212 Body_part denotes embryo http://purl.obolibrary.org/obo/UBERON_0000922
T5 325-334 Body_part denotes cartilage http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844
T7 1302-1314 Body_part denotes chondrocytes http://purl.obolibrary.org/obo/CL_0000138
T8 1353-1358 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T10 1445-1464 Body_part denotes limb bud mesenchyme http://purl.obolibrary.org/obo/UBERON_0010328

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 1302-1314 Cell denotes chondrocytes http://purl.obolibrary.org/obo/CL:0000138

GlyCosmos15-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 1405-1419 Disease denotes chondrosarcoma MONDO:0008977

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-62 Sentence denotes Chick cartilage chondroitin sulfate proteoglycan core protein.
T2 63-66 Sentence denotes II.
T3 67-139 Sentence denotes Nucleotide sequence of cDNA clone and localization of the S103L epitope.
T4 140-368 Sentence denotes A lambda gt11 expression library containing cDNA from total chick embryo was screened with S103L, a rat monoclonal antibody which reacts specifically with the core protein of the chick cartilage chondroitin sulfate proteoglycan.
T5 369-467 Sentence denotes One clone was identified which produced a 220-kDa beta-galactosidase/S103L-binding fusion protein.
T6 468-662 Sentence denotes Sequencing the entire 1.5-kilobase cDNA insert showed that it contained a single open reading frame, which encoded a portion of the proteoglycan core protein from the chondroitin sulfate domain.
T7 663-912 Sentence denotes This was confirmed by comparison with amino acid sequence data from peptide CS-B, which was derived from the chondroitin sulfate domain (Krueger, R.C., Jr., Fields, T. A., Hildreth, J., IV, and Schwartz, N.B. (1990) J. Biol. Chem. 265, 12075-12087).
T8 913-1238 Sentence denotes Furthermore, the 3' end of the insert overlapped with 23 bases at the 5' end of the published sequence for the C-terminal globular domain (Sai, S., Tanaka, T., Kosher, R. A., and Tanzer, M. L. (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 5081-5085), which oriented this clone, as well as the CS peptide, along the protein core.
T9 1239-1465 Sentence denotes The cDNA insert hybridized with a 9-kilobase mRNA from sternal chondrocytes as well as a similar sized message in brain but did not hybridize to any message from rat chondrosarcoma or from undifferentiated limb bud mesenchyme.
T10 1466-1709 Sentence denotes In further studies, the fusion protein as well as a cyanogen bromide fragment (70 kDa) derived from it were isolated and shown to react with S103L, indicating that cleavage at methionine residues does not disrupt the antibody recognition site.
T11 1710-2283 Sentence denotes Purification and N-terminal sequencing of the antigenic CNBr fragment derived from the fusion protein revealed that its N terminus is preceded by a methionine in the fusion protein and overlaps with the N terminus of peptide CS-B. As peptide CS-B is not recognized by S103L and the C terminus of peptide CS-B lies beyond the proteoglycan portion of the antigenic CNBr fragment, the S103L epitope is either contained within the 11 amino acids preceding the N terminus of peptide CS-B or it spans the clostripain cleavage site at the origin of the N terminus of peptide CS-B.

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 16-27 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T2 335-346 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T3 635-646 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081
T4 772-783 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes chondroitin http://www.glycoepitope.jp/epitopes/EP0081

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-62 Sentence denotes Chick cartilage chondroitin sulfate proteoglycan core protein.
T2 63-66 Sentence denotes II.
T3 67-139 Sentence denotes Nucleotide sequence of cDNA clone and localization of the S103L epitope.
T4 140-368 Sentence denotes A lambda gt11 expression library containing cDNA from total chick embryo was screened with S103L, a rat monoclonal antibody which reacts specifically with the core protein of the chick cartilage chondroitin sulfate proteoglycan.
T5 369-467 Sentence denotes One clone was identified which produced a 220-kDa beta-galactosidase/S103L-binding fusion protein.
T6 468-662 Sentence denotes Sequencing the entire 1.5-kilobase cDNA insert showed that it contained a single open reading frame, which encoded a portion of the proteoglycan core protein from the chondroitin sulfate domain.
T7 663-912 Sentence denotes This was confirmed by comparison with amino acid sequence data from peptide CS-B, which was derived from the chondroitin sulfate domain (Krueger, R.C., Jr., Fields, T. A., Hildreth, J., IV, and Schwartz, N.B. (1990) J. Biol. Chem. 265, 12075-12087).
T8 913-1238 Sentence denotes Furthermore, the 3' end of the insert overlapped with 23 bases at the 5' end of the published sequence for the C-terminal globular domain (Sai, S., Tanaka, T., Kosher, R. A., and Tanzer, M. L. (1986) Proc. Natl. Acad. Sci. U. S. A. 83, 5081-5085), which oriented this clone, as well as the CS peptide, along the protein core.
T9 1239-1465 Sentence denotes The cDNA insert hybridized with a 9-kilobase mRNA from sternal chondrocytes as well as a similar sized message in brain but did not hybridize to any message from rat chondrosarcoma or from undifferentiated limb bud mesenchyme.
T10 1466-1709 Sentence denotes In further studies, the fusion protein as well as a cyanogen bromide fragment (70 kDa) derived from it were isolated and shown to react with S103L, indicating that cleavage at methionine residues does not disrupt the antibody recognition site.
T11 1710-2283 Sentence denotes Purification and N-terminal sequencing of the antigenic CNBr fragment derived from the fusion protein revealed that its N terminus is preceded by a methionine in the fusion protein and overlaps with the N terminus of peptide CS-B. As peptide CS-B is not recognized by S103L and the C terminus of peptide CS-B lies beyond the proteoglycan portion of the antigenic CNBr fragment, the S103L epitope is either contained within the 11 amino acids preceding the N terminus of peptide CS-B or it spans the clostripain cleavage site at the origin of the N terminus of peptide CS-B.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 6-15 Body_part denotes cartilage FMA:71500
T2 142-148 Body_part denotes lambda FMA:264773
T3 206-212 Body_part denotes embryo FMA:296970
T4 325-334 Body_part denotes cartilage FMA:71500
T5 1302-1314 Body_part denotes chondrocytes FMA:66782
T6 1353-1358 Body_part denotes brain FMA:50801
T7 1445-1453 Body_part denotes limb bud FMA:296780

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 6-15 Body_part denotes cartilage http://purl.obolibrary.org/obo/MAT_0000189
T2 206-212 Body_part denotes embryo http://purl.obolibrary.org/obo/MAT_0000226
T3 325-334 Body_part denotes cartilage http://purl.obolibrary.org/obo/MAT_0000189
T4 1353-1358 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T5 1445-1449 Body_part denotes limb http://purl.obolibrary.org/obo/MAT_0000090

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 240-243 OrganismTaxon denotes rat 10114|10116
T3 1401-1404 OrganismTaxon denotes rat 10114|10116

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 6-15 Body_part denotes cartilage http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844
T3 142-148 Body_part denotes lambda http://purl.obolibrary.org/obo/UBERON_0013424
T4 206-212 Body_part denotes embryo http://purl.obolibrary.org/obo/UBERON_0000922
T5 325-334 Body_part denotes cartilage http://purl.obolibrary.org/obo/UBERON_0002418|http://purl.obolibrary.org/obo/UBERON_0007844
T7 1302-1314 Body_part denotes chondrocytes http://purl.obolibrary.org/obo/CL_0000138
T8 1353-1358 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T10 1445-1464 Body_part denotes limb bud mesenchyme http://purl.obolibrary.org/obo/UBERON_0010328

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 6-15 Body_part denotes cartilage http://purl.obolibrary.org/obo/MAT_0000189
T2 206-212 Body_part denotes embryo http://purl.obolibrary.org/obo/MAT_0000226
T3 325-334 Body_part denotes cartilage http://purl.obolibrary.org/obo/MAT_0000189
T4 1353-1358 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T5 1445-1449 Body_part denotes limb http://purl.obolibrary.org/obo/MAT_0000090

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 1302-1314 Cell denotes chondrocytes http://purl.obolibrary.org/obo/CL:0000138