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PubMed:1676597 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 13-32 DNA denotes human homeobox gene
T2 50-83 DNA denotes diverged Drosophila homeobox gene
T3 114-125 cell_type denotes lymphocytes
T4 133-146 DNA denotes homeobox gene
T5 148-152 DNA denotes HB24
T6 238-256 RNA denotes polyadenylated RNA
T7 271-294 cell_type denotes activated human B cells
T8 306-328 RNA denotes single mRNA transcript
T9 358-369 DNA denotes cDNA clones
T10 424-436 DNA denotes DNA sequence
T11 468-513 DNA denotes methionine codon-initiated open reading frame
T12 542-550 DNA denotes homeobox
T13 557-567 DNA denotes CAX repeat
T14 577-595 DNA denotes open reading frame
T15 657-668 DNA denotes homeodomain
T16 674-678 DNA denotes HB24
T17 701-738 DNA denotes mammalian and Drosophila homeodomains
T18 831-853 DNA denotes Drosophila homeodomain
T19 899-908 RNA denotes HB24 mRNA
T20 961-974 cell_type denotes T lymphocytes
T21 1024-1033 RNA denotes HB24 mRNA
T22 1126-1130 DNA denotes HB24
T23 1329-1333 DNA denotes HB24
T24 1373-1384 cell_type denotes lymphocytes

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-126 Sentence denotes Cloning of a human homeobox gene that resembles a diverged Drosophila homeobox gene and is expressed in activated lymphocytes.
S2 127-211 Sentence denotes A new homeobox gene, HB24, has been isolated from a human B-lymphocyte cDNA library.
S3 212-353 Sentence denotes Northern blot analysis of polyadenylated RNA purified from activated human B cells revealed a single mRNA transcript of approximately 2.3 kb.
S4 354-449 Sentence denotes Two cDNA clones were sequenced and provided 2,250 nucleotides (nt) of DNA sequence information.
S5 450-647 Sentence denotes There is a single methionine codon-initiated open reading frame of 1,458 nt in frame with a homeobox and a CAX repeat, and the open reading frame is predicted to encode a protein of 51,659 daltons.
S6 648-894 Sentence denotes When the homeodomain from HB24 was compared to known mammalian and Drosophila homeodomains it was found to be only moderately conserved, but when it was compared to a highly diverged Drosophila homeodomain, H2.0, it was found to be 80% identical.
S7 895-1105 Sentence denotes The HB24 mRNA was absent or present at low levels in normal B and T lymphocytes; however, with the appropriate activation signal HB24 mRNA was induced within several hours even in the presence of cycloheximide.
S8 1106-1223 Sentence denotes Characterization of HB24 expression in lymphoid and select developing tissues was performed by in situ hybridization.
S9 1224-1328 Sentence denotes Positive hybridization was found in thymus, tonsil, bone marrow, developing vessels, and in fetal brain.
S10 1329-1426 Sentence denotes HB24 is likely to have an important role in lymphocytes as well as in certain developing tissues.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 11-32 NP denotes a human homeobox gene
C2 33-37 NP denotes that
C3 48-83 NP denotes a diverged Drosophila homeobox gene
C4 127-146 NP denotes A new homeobox gene
C5 148-152 NP denotes HB24
C7 674-678 NP denotes HB24
C6 653-678 NP denotes the homeodomain from HB24
C8 715-738 NP denotes Drosophila homeodomains
C9 813-853 NP denotes a highly diverged Drosophila homeodomain
C10 855-859 NP denotes H2.0
C12 899-903 NP denotes HB24
C11 895-908 NP denotes The HB24 mRNA
C14 1024-1028 NP denotes HB24
C13 1024-1033 NP denotes HB24 mRNA
C15 1126-1141 NP denotes HB24 expression
C16 1329-1333 NP denotes HB24
R1 C2 C1 coref-relat that,a human homeobox gene
R2 C3 C1 coref-other a diverged Drosophila homeobox gene,a human homeobox gene
R3 C4 C5 coref-appos A new homeobox gene,HB24
R4 C7 C5 coref-ident HB24,HB24
R5 C6 C4 coref-other the homeodomain from HB24,A new homeobox gene
R6 C8 C9 coref-ident Drosophila homeodomains,a highly diverged Drosophila homeodomain
R7 C9 C10 coref-appos a highly diverged Drosophila homeodomain,H2.0
R8 C12 C7 coref-ident HB24,HB24
R9 C14 C12 coref-ident HB24,HB24
R10 C13 C11 coref-ident HB24 mRNA,The HB24 mRNA
R11 C15 C14 coref-other HB24 expression,HB24
R12 C16 C14 coref-ident HB24,HB24

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 13-32 DNA_family_or_group denotes human homeobox gene
T2 50-83 DNA_family_or_group denotes diverged Drosophila homeobox gene
T3 114-125 cell_type denotes lymphocytes
T4 133-146 DNA_family_or_group denotes homeobox gene
T5 148-152 DNA_domain_or_region denotes HB24
T6 238-256 RNA_family_or_group denotes polyadenylated RNA
T7 271-294 cell_type denotes activated human B cells
T8 306-328 RNA_family_or_group denotes single mRNA transcript
T9 358-369 DNA_molecule denotes cDNA clones
T10 398-415 polynucleotide denotes 2,250 nucleotides
T11 424-436 DNA_domain_or_region denotes DNA sequence
T12 468-513 DNA_domain_or_region denotes methionine codon-initiated open reading frame
T13 517-525 polynucleotide denotes 1,458 nt
T14 542-550 DNA_domain_or_region denotes homeobox
T15 557-567 DNA_domain_or_region denotes CAX repeat
T16 577-595 DNA_domain_or_region denotes open reading frame
T17 657-668 DNA_domain_or_region denotes homeodomain
T18 674-678 DNA_domain_or_region denotes HB24
T19 831-841 DNA_domain_or_region denotes Drosophila
T20 842-853 DNA_domain_or_region denotes homeodomain
T21 899-908 RNA_molecule denotes HB24 mRNA
T22 961-974 cell_type denotes T lymphocytes
T23 1024-1033 RNA_molecule denotes HB24 mRNA
T24 1091-1104 other_organic_compound denotes cycloheximide
T25 1126-1130 DNA_domain_or_region denotes HB24
T26 1204-1222 other_name denotes situ hybridization
T27 1224-1246 other_name denotes Positive hybridization
T28 1260-1266 body_part denotes thymus
T29 1268-1274 body_part denotes tonsil
T30 1276-1287 tissue denotes bone marrow
T31 1289-1307 body_part denotes developing vessels
T32 1316-1327 body_part denotes fetal brain
T33 1329-1333 DNA_domain_or_region denotes HB24
T34 1373-1384 cell_type denotes lymphocytes
T35 1407-1425 tissue denotes developing tissues