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PubMed:16597938 JSONTXT

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OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 26-41 http://identifiers.org/oryzabase.gene/10082 denotes binding protein
T2 101-116 http://identifiers.org/oryzabase.gene/10082 denotes binding protein
T3484 26-41 http://identifiers.org/ricegap/LOC_Os02g02410 denotes binding protein
T65878 101-116 http://identifiers.org/ricegap/LOC_Os02g02410 denotes binding protein
T42373 26-41 http://identifiers.org/rapdb.locus/Os02g0115900 denotes binding protein
T50781 101-116 http://identifiers.org/rapdb.locus/Os02g0115900 denotes binding protein
T87082 26-41 http://identifiers.org/uniprot/Q6Z7B0 denotes binding protein
T80870 26-41 http://identifiers.org/uniprot/O24182 denotes binding protein
T3 101-116 http://identifiers.org/uniprot/Q6Z7B0 denotes binding protein
T4 101-116 http://identifiers.org/uniprot/O24182 denotes binding protein
M_0 81-118 hunflair:NA:Gene denotes Hydrophobic surface binding protein A
M_1 963-970 hunflair:NA:Chemical denotes CaCl(2)
M_2 502-511 hunflair:NA:Species denotes A. ozyzae
M_3 61-79 hunflair:NA:Species denotes Aspergillus oryzae
M_4 194-212 hunflair:NA:Species denotes Aspergillus oryzae
M_5 248-281 hunflair:NA:Chemical denotes polybutylene succinate-co-adipate
M_6 575-584 hunflair:NA:Species denotes A. oryzae
M_7 615-624 hunflair:NA:Species denotes A. oryzae
M_8 1388-1397 hunflair:NA:Species denotes A. oryzae
M_9 1511-1520 hunflair:NA:Species denotes A. oryzae
M_10 384-394 hunflair:NA:Chemical denotes amino acid
M_11 834-844 hunflair:NA:Chemical denotes amino acid
M_12 955-959 hunflair:NA:Chemical denotes NaCl
M_13 194-218 hunflair:NA:Species denotes Aspergillus oryzae RIB40
M_14 544-548 hunflair:NA:Gene denotes hsbA
M_15 650-654 hunflair:NA:Gene denotes hsbA
M_16 43-47 hunflair:NA:Gene denotes HsbA
M_17 120-124 hunflair:NA:Gene denotes HsbA
M_18 326-330 hunflair:NA:Gene denotes HsbA
M_19 490-494 hunflair:NA:Gene denotes HsbA
M_20 671-675 hunflair:NA:Gene denotes HsbA
M_21 765-769 hunflair:NA:Gene denotes HsbA
M_22 829-833 hunflair:NA:Gene denotes HsbA
M_23 868-872 hunflair:NA:Gene denotes HsbA
M_24 893-897 hunflair:NA:Gene denotes HsbA
M_25 977-981 hunflair:NA:Gene denotes HsbA
M_26 1116-1120 hunflair:NA:Gene denotes HsbA
M_27 1204-1208 hunflair:NA:Gene denotes HsbA
M_28 1484-1488 hunflair:NA:Gene denotes HsbA
M_29 1072-1084 hunflair:NA:Gene denotes polyesterase
M_30 1066-1071 hunflair:NA:Gene denotes CutL1
M_31 1086-1091 hunflair:NA:Gene denotes CutL1
M_32 1256-1261 hunflair:NA:Gene denotes CutL1
M_33 1277-1282 hunflair:NA:Gene denotes CutL1
M_34 1471-1476 hunflair:NA:Gene denotes CutL1
M_35 1410-1414 hunflair:NA:Gene denotes RolA
M_36 283-287 hunflair:NA:Chemical denotes PBSA
M_37 922-926 hunflair:NA:Chemical denotes PBSA
M_38 1014-1018 hunflair:NA:Chemical denotes PBSA
M_39 1041-1045 hunflair:NA:Chemical denotes PBSA
M_40 1230-1234 hunflair:NA:Chemical denotes PBSA
M_41 1305-1309 hunflair:NA:Chemical denotes PBSA
M_42 1333-1337 hunflair:NA:Chemical denotes PBSA
M_43 1427-1431 hunflair:NA:Chemical denotes PBSA
M_44 544-549 hunflair:NA:Gene denotes hsbA
M_45 299-305 hunflair:NA:Chemical denotes carbon

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 81-118 hunflair:NA:Gene denotes Hydrophobic surface binding protein A
M_1 963-970 hunflair:NA:Chemical denotes CaCl(2)
M_2 502-511 hunflair:NA:Species denotes A. ozyzae
M_3 61-79 hunflair:NA:Species denotes Aspergillus oryzae
M_4 194-212 hunflair:NA:Species denotes Aspergillus oryzae
M_5 248-281 hunflair:NA:Chemical denotes polybutylene succinate-co-adipate
M_6 575-584 hunflair:NA:Species denotes A. oryzae
M_7 615-624 hunflair:NA:Species denotes A. oryzae
M_8 1388-1397 hunflair:NA:Species denotes A. oryzae
M_9 1511-1520 hunflair:NA:Species denotes A. oryzae
M_10 384-394 hunflair:NA:Chemical denotes amino acid
M_11 834-844 hunflair:NA:Chemical denotes amino acid
M_12 955-959 hunflair:NA:Chemical denotes NaCl
M_13 194-218 hunflair:NA:Species denotes Aspergillus oryzae RIB40
M_14 544-548 hunflair:NA:Gene denotes hsbA
M_15 650-654 hunflair:NA:Gene denotes hsbA
M_16 43-47 hunflair:NA:Gene denotes HsbA
M_17 120-124 hunflair:NA:Gene denotes HsbA
M_18 326-330 hunflair:NA:Gene denotes HsbA
M_19 490-494 hunflair:NA:Gene denotes HsbA
M_20 671-675 hunflair:NA:Gene denotes HsbA
M_21 765-769 hunflair:NA:Gene denotes HsbA
M_22 829-833 hunflair:NA:Gene denotes HsbA
M_23 868-872 hunflair:NA:Gene denotes HsbA
M_24 893-897 hunflair:NA:Gene denotes HsbA
M_25 977-981 hunflair:NA:Gene denotes HsbA
M_26 1116-1120 hunflair:NA:Gene denotes HsbA
M_27 1204-1208 hunflair:NA:Gene denotes HsbA
M_28 1484-1488 hunflair:NA:Gene denotes HsbA
M_29 1072-1084 hunflair:NA:Gene denotes polyesterase
M_30 1066-1071 hunflair:NA:Gene denotes CutL1
M_31 1086-1091 hunflair:NA:Gene denotes CutL1
M_32 1256-1261 hunflair:NA:Gene denotes CutL1
M_33 1277-1282 hunflair:NA:Gene denotes CutL1
M_34 1471-1476 hunflair:NA:Gene denotes CutL1
M_35 1410-1414 hunflair:NA:Gene denotes RolA
M_36 283-287 hunflair:NA:Chemical denotes PBSA
M_37 922-926 hunflair:NA:Chemical denotes PBSA
M_38 1014-1018 hunflair:NA:Chemical denotes PBSA
M_39 1041-1045 hunflair:NA:Chemical denotes PBSA
M_40 1230-1234 hunflair:NA:Chemical denotes PBSA
M_41 1305-1309 hunflair:NA:Chemical denotes PBSA
M_42 1333-1337 hunflair:NA:Chemical denotes PBSA
M_43 1427-1431 hunflair:NA:Chemical denotes PBSA
M_44 544-549 hunflair:NA:Gene denotes hsbA
M_45 299-305 hunflair:NA:Chemical denotes carbon

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-80 Sentence denotes Novel hydrophobic surface binding protein, HsbA, produced by Aspergillus oryzae.
T2 81-313 Sentence denotes Hydrophobic surface binding protein A (HsbA) is a secreted protein (14.5 kDa) isolated from the culture broth of Aspergillus oryzae RIB40 grown in a medium containing polybutylene succinate-co-adipate (PBSA) as a sole carbon source.
T3 314-404 Sentence denotes We purified HsbA from the culture broth and determined its N-terminal amino acid sequence.
T4 405-529 Sentence denotes We found a DNA sequence encoding a protein whose N terminus matched that of purified HsbA in the A. ozyzae genomic sequence.
T5 530-655 Sentence denotes We cloned the hsbA genomic DNA and cDNA from A. oryzae and constructed a recombinant A. oryzae strain highly expressing hsbA.
T6 656-737 Sentence denotes Orthologues of HsbA were present in animal pathogenic and entomopathogenic fungi.
T7 738-815 Sentence denotes Heterologously synthesized HsbA was purified and biochemically characterized.
T8 816-971 Sentence denotes Although the HsbA amino acid sequence suggests that HsbA may be hydrophilic, HsbA adsorbed to hydrophobic PBSA surfaces in the presence of NaCl or CaCl(2).
T9 972-1085 Sentence denotes When HsbA was adsorbed on the hydrophobic PBSA surfaces, it promoted PBSA degradation via the CutL1 polyesterase.
T10 1086-1171 Sentence denotes CutL1 interacts directly with HsbA attached to the hydrophobic QCM electrode surface.
T11 1172-1350 Sentence denotes These results suggest that when HsbA is adsorbed onto the PBSA surface, it recruits CutL1, and that when CutL1 is accumulated on the PBSA surface, it stimulates PBSA degradation.
T12 1351-1477 Sentence denotes We previously reported that when the A. oryzae hydrophobin RolA is bound to PBSA surfaces, it too specifically recruits CutL1.
T13 1478-1656 Sentence denotes Since HsbA is not a hydrophobin, A. oryzae may use several types of proteins to recruit lytic enzymes to the surface of hydrophobic solid materials and promote their degradation.