PubMed:16575011
Annnotations
LitCoin-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-146 | Sentence | denotes | Tumor thymidylate synthase 1494del6 genotype as a prognostic factor in colorectal cancer patients receiving fluorouracil-based adjuvant treatment. |
T2 | 147-155 | Sentence | denotes | PURPOSE: |
T3 | 156-385 | Sentence | denotes | The purpose of this study was to analyze the value of germline and tumor thymidylate synthase (TS) genotyping as a prognostic marker in a series of colorectal cancer patients receiving adjuvant fluorouracil (FU) -based treatment. |
T4 | 386-407 | Sentence | denotes | PATIENTS AND METHODS: |
T5 | 408-557 | Sentence | denotes | One hundred twenty-nine colorectal cancer patients homogeneously treated with FU plus levamisole or leucovorin in the adjuvant setting were included. |
T6 | 558-714 | Sentence | denotes | TS enhancer region, 3R G > C single nucleotide polymorphism (SNP), and TS 1494del6 polymorphisms were assessed in both fresh-frozen normal mucosa and tumor. |
T7 | 715-843 | Sentence | denotes | Mutational analyses of TS and allelic imbalances were studied in all primary tumors and in 18 additional metachronic metastases. |
T8 | 844-919 | Sentence | denotes | TS protein immunostaining was assessed in an expanded series of 214 tumors. |
T9 | 920-999 | Sentence | denotes | Multivariate Cox models were adjusted for stage, differentiation, and location. |
T10 | 1000-1008 | Sentence | denotes | RESULTS: |
T11 | 1009-1210 | Sentence | denotes | Tumor genotyping (frequency of allelic loss, 26%) showed that the 3R/3R genotype was associated with a better outcome (hazard ratio [HR] = 0.38; 95% CI, 0.16 to 0.93; P = .020 for the recessive model). |
T12 | 1211-1270 | Sentence | denotes | 3R G > C SNP genotyping did not add prognostic information. |
T13 | 1271-1452 | Sentence | denotes | Tumor TS 1494del6 allele (frequency of allelic loss, 36%) was protective (for each allele with the deletion, based on an additive model, HR = 0.42; 95% CI, 0.22 to 0.82; P = .0034). |
T14 | 1453-1713 | Sentence | denotes | Both polymorphisms were in strong linkage disequilibrium (D' = 0.71, P < .001), and the 3R/-6 base pair (bp) haplotype showed a significant overall survival benefit compared with the most prevalent haplotype 2R/+6bp (HR = 0.42; 95% CI, 0.20 to 0.85; P = .017). |
T15 | 1714-1780 | Sentence | denotes | No TS point mutation was detected in primary tumors or metastases. |
T16 | 1781-1873 | Sentence | denotes | TS protein immunostaining was not associated with survival or any of the genotypes analyzed. |
T17 | 1874-1885 | Sentence | denotes | CONCLUSION: |
T18 | 1886-2001 | Sentence | denotes | Tumor TS 1494del6 genotype may be a prognostic factor in FU-based adjuvant treatment of colorectal cancer patients. |
LitCoin-entities
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
2883 | 0-5 | DiseaseOrPhenotypicFeature | denotes | Tumor | MESH:D009369 |
2884 | 6-26 | GeneOrGeneProduct | denotes | thymidylate synthase | NCBIGene:7298 |
2885 | 27-35 | SequenceVariant | denotes | 1494del6 | c|DEL|1494|6 |
2886 | 71-88 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | MESH:D015179 |
2887 | 89-97 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
2888 | 108-120 | ChemicalEntity | denotes | fluorouracil | MESH:D005472 |
2889 | 223-228 | DiseaseOrPhenotypicFeature | denotes | tumor | MESH:D009369 |
2890 | 229-249 | GeneOrGeneProduct | denotes | thymidylate synthase | NCBIGene:7298 |
2891 | 251-253 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2892 | 304-321 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | MESH:D015179 |
2893 | 322-330 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
2894 | 350-362 | ChemicalEntity | denotes | fluorouracil | MESH:D005472 |
2895 | 364-366 | ChemicalEntity | denotes | FU | MESH:D005472 |
2896 | 386-394 | OrganismTaxon | denotes | PATIENTS | NCBITaxon:9606 |
2897 | 432-449 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | MESH:D015179 |
2898 | 450-458 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
2899 | 486-488 | ChemicalEntity | denotes | FU | MESH:D005472 |
2900 | 494-504 | ChemicalEntity | denotes | levamisole | MESH:D007978 |
2901 | 508-518 | ChemicalEntity | denotes | leucovorin | MESH:D002955 |
2902 | 558-560 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2903 | 581-586 | SequenceVariant | denotes | G > C | c|SUB|G||C |
2904 | 629-631 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2905 | 632-640 | SequenceVariant | denotes | 1494del6 | c|DEL|1494|6 |
2906 | 708-713 | DiseaseOrPhenotypicFeature | denotes | tumor | MESH:D009369 |
2907 | 738-740 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2908 | 792-798 | DiseaseOrPhenotypicFeature | denotes | tumors | MESH:D009369 |
2909 | 832-842 | DiseaseOrPhenotypicFeature | denotes | metastases | MESH:D009362 |
2910 | 844-846 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2911 | 912-918 | DiseaseOrPhenotypicFeature | denotes | tumors | MESH:D009369 |
2912 | 1009-1014 | DiseaseOrPhenotypicFeature | denotes | Tumor | MESH:D009369 |
2913 | 1214-1219 | SequenceVariant | denotes | G > C | c|SUB|G||C |
2914 | 1271-1276 | DiseaseOrPhenotypicFeature | denotes | Tumor | MESH:D009369 |
2915 | 1277-1279 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2916 | 1280-1288 | SequenceVariant | denotes | 1494del6 | c|DEL|1494|6 |
2917 | 1717-1719 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2918 | 1759-1765 | DiseaseOrPhenotypicFeature | denotes | tumors | MESH:D009369 |
2919 | 1769-1779 | DiseaseOrPhenotypicFeature | denotes | metastases | MESH:D009362 |
2920 | 1781-1783 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2921 | 1886-1891 | DiseaseOrPhenotypicFeature | denotes | Tumor | MESH:D009369 |
2922 | 1892-1894 | GeneOrGeneProduct | denotes | TS | NCBIGene:7298 |
2923 | 1895-1903 | SequenceVariant | denotes | 1494del6 | c|DEL|1494|6 |
2924 | 1943-1945 | ChemicalEntity | denotes | FU | MESH:D005472 |
2925 | 1974-1991 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | MESH:D015179 |
2926 | 1992-2000 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
LitCoin_Mondo
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 71-88 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0005575 |
T2 | 82-88 | DiseaseOrPhenotypicFeature | denotes | cancer | 0004992 |
T3 | 304-321 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0005575 |
T4 | 315-321 | DiseaseOrPhenotypicFeature | denotes | cancer | 0004992 |
T5 | 432-449 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0005575 |
T6 | 443-449 | DiseaseOrPhenotypicFeature | denotes | cancer | 0004992 |
T7 | 1974-1991 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0005575 |
T8 | 1985-1991 | DiseaseOrPhenotypicFeature | denotes | cancer | 0004992 |
LitCoin-SeqVar
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 27-35 | SequenceVariant | denotes | 1494del6 |
T2 | 632-640 | SequenceVariant | denotes | 1494del6 |
T3 | 1280-1288 | SequenceVariant | denotes | 1494del6 |
T4 | 1895-1903 | SequenceVariant | denotes | 1494del6 |
LitCoin-GeneOrGeneProduct-v2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 6-26 | GeneOrGeneProduct | denotes | thymidylate synthase |
T2 | 61-67 | GeneOrGeneProduct | denotes | factor |
T3 | 229-249 | GeneOrGeneProduct | denotes | thymidylate synthase |
T4 | 251-253 | GeneOrGeneProduct | denotes | TS |
T5 | 558-560 | GeneOrGeneProduct | denotes | TS |
T6 | 629-631 | GeneOrGeneProduct | denotes | TS |
T7 | 738-740 | GeneOrGeneProduct | denotes | TS |
T8 | 844-846 | GeneOrGeneProduct | denotes | TS |
T9 | 847-854 | GeneOrGeneProduct | denotes | protein |
T10 | 889-897 | GeneOrGeneProduct | denotes | expanded |
T11 | 1027-1036 | GeneOrGeneProduct | denotes | frequency |
T12 | 1277-1279 | GeneOrGeneProduct | denotes | TS |
T13 | 1297-1306 | GeneOrGeneProduct | denotes | frequency |
T14 | 1717-1719 | GeneOrGeneProduct | denotes | TS |
T15 | 1781-1783 | GeneOrGeneProduct | denotes | TS |
T16 | 1784-1791 | GeneOrGeneProduct | denotes | protein |
T17 | 1892-1894 | GeneOrGeneProduct | denotes | TS |
T18 | 1933-1939 | GeneOrGeneProduct | denotes | factor |
LitCoin-GeneOrGeneProduct-v0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-5 | GeneOrGeneProduct | denotes | Tumor |
T2 | 6-26 | GeneOrGeneProduct | denotes | thymidylate synthase |
T3 | 61-67 | GeneOrGeneProduct | denotes | factor |
T4 | 121-126 | GeneOrGeneProduct | denotes | based |
T5 | 201-206 | GeneOrGeneProduct | denotes | value |
T6 | 223-228 | GeneOrGeneProduct | denotes | tumor |
T7 | 229-249 | GeneOrGeneProduct | denotes | thymidylate synthase |
T8 | 251-253 | GeneOrGeneProduct | denotes | TS |
T9 | 289-293 | GeneOrGeneProduct | denotes | in a |
T10 | 369-374 | GeneOrGeneProduct | denotes | based |
T11 | 395-406 | GeneOrGeneProduct | denotes | AND METHODS |
T12 | 427-431 | GeneOrGeneProduct | denotes | nine |
T13 | 558-560 | GeneOrGeneProduct | denotes | TS |
T14 | 581-586 | GeneOrGeneProduct | denotes | G > C |
T15 | 629-631 | GeneOrGeneProduct | denotes | TS |
T16 | 708-713 | GeneOrGeneProduct | denotes | tumor |
T17 | 715-725 | GeneOrGeneProduct | denotes | Mutational |
T18 | 738-740 | GeneOrGeneProduct | denotes | TS |
T19 | 780-783 | GeneOrGeneProduct | denotes | all |
T20 | 792-798 | GeneOrGeneProduct | denotes | tumors |
T21 | 803-808 | GeneOrGeneProduct | denotes | in 18 |
T22 | 844-846 | GeneOrGeneProduct | denotes | TS |
T23 | 847-854 | GeneOrGeneProduct | denotes | protein |
T24 | 889-897 | GeneOrGeneProduct | denotes | expanded |
T25 | 912-918 | GeneOrGeneProduct | denotes | tumors |
T26 | 1009-1014 | GeneOrGeneProduct | denotes | Tumor |
T27 | 1027-1036 | GeneOrGeneProduct | denotes | frequency |
T28 | 1176-1184 | GeneOrGeneProduct | denotes | P = .020 |
T29 | 1214-1219 | GeneOrGeneProduct | denotes | G > C |
T30 | 1271-1276 | GeneOrGeneProduct | denotes | Tumor |
T31 | 1277-1279 | GeneOrGeneProduct | denotes | TS |
T32 | 1297-1306 | GeneOrGeneProduct | denotes | frequency |
T33 | 1380-1385 | GeneOrGeneProduct | denotes | based |
T34 | 1547-1551 | GeneOrGeneProduct | denotes | base |
T35 | 1552-1556 | GeneOrGeneProduct | denotes | pair |
T36 | 1717-1719 | GeneOrGeneProduct | denotes | TS |
T37 | 1720-1725 | GeneOrGeneProduct | denotes | point |
T38 | 1726-1734 | GeneOrGeneProduct | denotes | mutation |
T39 | 1759-1765 | GeneOrGeneProduct | denotes | tumors |
T40 | 1781-1783 | GeneOrGeneProduct | denotes | TS |
T41 | 1784-1791 | GeneOrGeneProduct | denotes | protein |
T42 | 1886-1891 | GeneOrGeneProduct | denotes | Tumor |
T43 | 1892-1894 | GeneOrGeneProduct | denotes | TS |
T44 | 1913-1921 | GeneOrGeneProduct | denotes | may be a |
T45 | 1933-1939 | GeneOrGeneProduct | denotes | factor |
T46 | 1946-1951 | GeneOrGeneProduct | denotes | based |
LitCoin-Disease-MeSH
Id | Subject | Object | Predicate | Lexical cue | originalLabel |
---|---|---|---|---|---|
T1 | 0-5 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T2 | 71-88 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T3 | 223-228 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
T4 | 304-321 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T5 | 432-449 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T6 | 708-713 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
T7 | 792-798 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 |
T8 | 832-842 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 |
T9 | 912-918 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 |
T10 | 1009-1014 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T11 | 1271-1276 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T12 | 1759-1765 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 |
T13 | 1769-1779 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 |
T14 | 1886-1891 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T15 | 1974-1991 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
LitCoin-GeneOrGeneProduct-v3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 6-26 | GeneOrGeneProduct | denotes | thymidylate synthase |
T2 | 229-249 | GeneOrGeneProduct | denotes | thymidylate synthase |
T3 | 251-253 | GeneOrGeneProduct | denotes | TS |
T4 | 558-560 | GeneOrGeneProduct | denotes | TS |
T5 | 629-631 | GeneOrGeneProduct | denotes | TS |
T6 | 738-740 | GeneOrGeneProduct | denotes | TS |
T7 | 844-846 | GeneOrGeneProduct | denotes | TS |
T8 | 1277-1279 | GeneOrGeneProduct | denotes | TS |
T9 | 1717-1719 | GeneOrGeneProduct | denotes | TS |
T10 | 1781-1783 | GeneOrGeneProduct | denotes | TS |
T11 | 1892-1894 | GeneOrGeneProduct | denotes | TS |
LitCoin_Mondo_095
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 71-88 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0024331|0005575 |
T3 | 223-228 | DiseaseOrPhenotypicFeature | denotes | tumor | 0005070 |
T4 | 251-253 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T6 | 304-321 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0024331|0005575 |
T8 | 432-449 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0024331|0005575 |
T10 | 558-560 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T12 | 629-631 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T14 | 708-713 | DiseaseOrPhenotypicFeature | denotes | tumor | 0005070 |
T15 | 738-740 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T17 | 844-846 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T19 | 1277-1279 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T21 | 1717-1719 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T23 | 1781-1783 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T25 | 1892-1894 | DiseaseOrPhenotypicFeature | denotes | TS | 0016455|0010979 |
T27 | 1974-1991 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | 0024331|0005575 |
LitCoin-MeSH-Disease-2
Id | Subject | Object | Predicate | Lexical cue | ID: |
---|---|---|---|---|---|
T1 | 0-5 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T2 | 71-88 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T3 | 223-228 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
T4 | 304-321 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T5 | 432-449 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T6 | 708-713 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
T7 | 792-798 | DiseaseOrPhenotypicFeature | denotes | tumors | DISEASE|D009369 |
T9 | 832-842 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 |
T10 | 912-918 | DiseaseOrPhenotypicFeature | denotes | tumors | DISEASE|D009369 |
T12 | 1009-1014 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T13 | 1271-1276 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T14 | 1759-1765 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 |
T15 | 1769-1779 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 |
T16 | 1886-1891 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T17 | 1974-1991 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
LitCoin-MONDO_bioort2019
Id | Subject | Object | Predicate | Lexical cue | #label |
---|---|---|---|---|---|
T1 | 0-5 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T2 | 71-88 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T3 | 223-228 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
T4 | 304-321 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T5 | 432-449 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
T6 | 708-713 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 |
T7 | 792-798 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 |
T8 | 832-842 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 |
T9 | 912-918 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 |
T10 | 1009-1014 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T11 | 1271-1276 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T12 | 1759-1765 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 |
T13 | 1769-1779 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 |
T14 | 1886-1891 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 |
T15 | 1974-1991 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 |
LitCoin-Chemical-MeSH-CHEBI
Id | Subject | Object | Predicate | Lexical cue | ID: |
---|---|---|---|---|---|
T1 | 6-26 | ChemicalEntity | denotes | thymidylate synthase | D013940 |
T2 | 108-120 | ChemicalEntity | denotes | fluorouracil | D005472|http://purl.obolibrary.org/obo/CHEBI_46345 |
T4 | 229-249 | ChemicalEntity | denotes | thymidylate synthase | D013940 |
T5 | 251-253 | ChemicalEntity | denotes | TS | D013940 |
T6 | 350-362 | ChemicalEntity | denotes | fluorouracil | D005472|http://purl.obolibrary.org/obo/CHEBI_46345 |
T8 | 364-366 | ChemicalEntity | denotes | FU | D005472 |
T9 | 486-488 | ChemicalEntity | denotes | FU | D005472 |
T10 | 494-504 | ChemicalEntity | denotes | levamisole | D007978|http://purl.obolibrary.org/obo/CHEBI_6432 |
T12 | 508-518 | ChemicalEntity | denotes | leucovorin | D002955 |
T13 | 558-560 | ChemicalEntity | denotes | TS | D013940 |
T14 | 629-631 | ChemicalEntity | denotes | TS | D013940 |
T15 | 738-740 | ChemicalEntity | denotes | TS | D013940 |
T16 | 844-846 | ChemicalEntity | denotes | TS | D013940 |
T17 | 1277-1279 | ChemicalEntity | denotes | TS | D013940 |
T18 | 1717-1719 | ChemicalEntity | denotes | TS | D013940 |
T19 | 1781-1783 | ChemicalEntity | denotes | TS | D013940 |
T20 | 1892-1894 | ChemicalEntity | denotes | TS | D013940 |
T21 | 1943-1945 | ChemicalEntity | denotes | FU | D005472 |
LitCoin-NCBITaxon-2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 89-97 | OrganismTaxon | denotes | patients |
T2 | 322-330 | OrganismTaxon | denotes | patients |
T3 | 450-458 | OrganismTaxon | denotes | patients |
T4 | 1992-2000 | OrganismTaxon | denotes | patients |
LitCoin-training-merged
Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
---|---|---|---|---|---|---|
T21 | 1943-1945 | ChemicalEntity | denotes | FU | D005472 | |
T20 | 1892-1894 | ChemicalEntity | denotes | TS | D013940 | |
T19 | 1781-1783 | ChemicalEntity | denotes | TS | D013940 | |
T18 | 1717-1719 | ChemicalEntity | denotes | TS | D013940 | |
T17 | 1277-1279 | ChemicalEntity | denotes | TS | D013940 | |
T16 | 844-846 | ChemicalEntity | denotes | TS | D013940 | |
T15 | 738-740 | ChemicalEntity | denotes | TS | D013940 | |
T14 | 629-631 | ChemicalEntity | denotes | TS | D013940 | |
T13 | 558-560 | ChemicalEntity | denotes | TS | D013940 | |
T12 | 508-518 | ChemicalEntity | denotes | leucovorin | D002955 | |
T10 | 494-504 | ChemicalEntity | denotes | levamisole | http://purl.obolibrary.org/obo/CHEBI_6432|D007978 | |
T9 | 486-488 | ChemicalEntity | denotes | FU | D005472 | |
T8 | 364-366 | ChemicalEntity | denotes | FU | D005472 | |
T6 | 350-362 | ChemicalEntity | denotes | fluorouracil | http://purl.obolibrary.org/obo/CHEBI_46345|D005472 | |
T5 | 251-253 | ChemicalEntity | denotes | TS | D013940 | |
T4 | 229-249 | ChemicalEntity | denotes | thymidylate synthase | D013940 | |
T2 | 108-120 | ChemicalEntity | denotes | fluorouracil | http://purl.obolibrary.org/obo/CHEBI_46345|D005472 | |
T1 | 6-26 | ChemicalEntity | denotes | thymidylate synthase | D013940 | |
T11 | 1892-1894 | GeneOrGeneProduct | denotes | TS | ||
T75100 | 1781-1783 | GeneOrGeneProduct | denotes | TS | ||
T10468 | 1717-1719 | GeneOrGeneProduct | denotes | TS | ||
T61565 | 1277-1279 | GeneOrGeneProduct | denotes | TS | ||
T7 | 844-846 | GeneOrGeneProduct | denotes | TS | ||
T82298 | 738-740 | GeneOrGeneProduct | denotes | TS | ||
T97072 | 629-631 | GeneOrGeneProduct | denotes | TS | ||
T45520 | 558-560 | GeneOrGeneProduct | denotes | TS | ||
T3 | 251-253 | GeneOrGeneProduct | denotes | TS | ||
T89156 | 229-249 | GeneOrGeneProduct | denotes | thymidylate synthase | ||
T3816 | 6-26 | GeneOrGeneProduct | denotes | thymidylate synthase | ||
T52260 | 1974-1991 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 | |
T75272 | 1886-1891 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 | |
T25332 | 1769-1779 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 | |
T23696 | 1759-1765 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 | |
T61220 | 1271-1276 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 | |
T59 | 1009-1014 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 | |
T25142 | 912-918 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 | |
T82527 | 832-842 | DiseaseOrPhenotypicFeature | denotes | metastases | D009362 | |
T45078 | 792-798 | DiseaseOrPhenotypicFeature | denotes | tumors | D009369 | |
T6600 | 708-713 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 | |
T89114 | 432-449 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 | |
T11093 | 304-321 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 | |
T21034 | 223-228 | DiseaseOrPhenotypicFeature | denotes | tumor | D009369 | |
T72992 | 71-88 | DiseaseOrPhenotypicFeature | denotes | colorectal cancer | D015179 | |
T58484 | 0-5 | DiseaseOrPhenotypicFeature | denotes | Tumor | D009369 | |
T3402 | 1992-2000 | OrganismTaxon | denotes | patients | ||
T33755 | 450-458 | OrganismTaxon | denotes | patients | ||
T1525 | 322-330 | OrganismTaxon | denotes | patients | ||
T46258 | 89-97 | OrganismTaxon | denotes | patients | ||
T89547 | 1895-1903 | SequenceVariant | denotes | 1494del6 | ||
T86536 | 1280-1288 | SequenceVariant | denotes | 1494del6 | ||
T55846 | 632-640 | SequenceVariant | denotes | 1494del6 | ||
T8135 | 27-35 | SequenceVariant | denotes | 1494del6 |
PubmedHPO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 223-228 | HP_0002664 | denotes | tumor |
T2 | 315-321 | HP_0002664 | denotes | cancer |
DisGeNET5_gene_disease
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
16575011-0#6#26#gene7298 | 6-26 | gene7298 | denotes | thymidylate synthase |
16575011-0#71#88#diseaseC0009402 | 71-88 | diseaseC0009402 | denotes | colorectal cancer |
16575011-0#71#88#diseaseC1527249 | 71-88 | diseaseC1527249 | denotes | colorectal cancer |
16575011-11#3#5#gene7298 | 1717-1719 | gene7298 | denotes | TS |
16575011-11#55#65#diseaseC0027627 | 1769-1779 | diseaseC0027627 | denotes | metastases |
6#26#gene729871#88#diseaseC0009402 | 16575011-0#6#26#gene7298 | 16575011-0#71#88#diseaseC0009402 | associated_with | thymidylate synthase,colorectal cancer |
6#26#gene729871#88#diseaseC1527249 | 16575011-0#6#26#gene7298 | 16575011-0#71#88#diseaseC1527249 | associated_with | thymidylate synthase,colorectal cancer |
3#5#gene729855#65#diseaseC0027627 | 16575011-11#3#5#gene7298 | 16575011-11#55#65#diseaseC0027627 | associated_with | TS,metastases |
tmVarCorpus
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 27-35 | DNAMutation:|DEL|1494|6 | denotes | 1494del6 |
T2 | 581-586 | DNAMutation:|SUB|G||C | denotes | G > C |
T3 | 632-640 | DNAMutation:|DEL|1494|6 | denotes | 1494del6 |
T4 | 1214-1219 | DNAMutation:|SUB|G||C | denotes | G > C |
T5 | 1280-1288 | DNAMutation:|DEL|1494|6 | denotes | 1494del6 |
T6 | 1895-1903 | DNAMutation:|DEL|1494|6 | denotes | 1494del6 |
DisGeNET
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T0 | 1717-1719 | gene:7298 | denotes | TS |
T1 | 1769-1779 | disease:C0027627 | denotes | metastases |
T2 | 1717-1719 | gene:7298 | denotes | TS |
T3 | 1769-1779 | disease:C2939419 | denotes | metastases |
R1 | T0 | T1 | associated_with | TS,metastases |
R2 | T2 | T3 | associated_with | TS,metastases |