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PubMed:16541406 / 152-323 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T2 0-171 Sentence denotes A relatively high frequency of germ-line genomic rearrangements in MLH1 and MSH2 has been reported among Lynch Syndrome (HNPCC) patients from different ethnic populations.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
2823 67-71 GeneOrGeneProduct denotes MLH1 NCBIGene:4292
2824 76-80 GeneOrGeneProduct denotes MSH2 NCBIGene:4436
2825 105-119 DiseaseOrPhenotypicFeature denotes Lynch Syndrome MESH:D003123
2826 121-126 DiseaseOrPhenotypicFeature denotes HNPCC MESH:D003123
2827 128-136 OrganismTaxon denotes patients NCBITaxon:9606

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T2 105-119 DiseaseOrPhenotypicFeature denotes Lynch Syndrome 0005835

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T5 13-17 GeneOrGeneProduct denotes high
T6 18-27 GeneOrGeneProduct denotes frequency
T7 67-71 GeneOrGeneProduct denotes MLH1
T8 76-80 GeneOrGeneProduct denotes MSH2
T9 111-119 GeneOrGeneProduct denotes Syndrome
T10 121-126 GeneOrGeneProduct denotes HNPCC

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T7 13-17 GeneOrGeneProduct denotes high
T8 18-27 GeneOrGeneProduct denotes frequency
T9 31-35 GeneOrGeneProduct denotes germ
T10 36-40 GeneOrGeneProduct denotes line
T11 67-71 GeneOrGeneProduct denotes MLH1
T12 76-80 GeneOrGeneProduct denotes MSH2
T13 111-119 GeneOrGeneProduct denotes Syndrome
T14 121-126 GeneOrGeneProduct denotes HNPCC

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T3 105-119 DiseaseOrPhenotypicFeature denotes Lynch Syndrome D003123
T4 121-126 DiseaseOrPhenotypicFeature denotes HNPCC DISEASE

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T3 67-71 GeneOrGeneProduct denotes MLH1
T4 76-80 GeneOrGeneProduct denotes MSH2

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T3 105-119 DiseaseOrPhenotypicFeature denotes Lynch Syndrome 0005835
T4 121-126 DiseaseOrPhenotypicFeature denotes HNPCC 0018630

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T3 105-119 DiseaseOrPhenotypicFeature denotes Lynch Syndrome D003123
T4 121-126 DiseaseOrPhenotypicFeature denotes HNPCC DISEASE

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T3 105-119 DiseaseOrPhenotypicFeature denotes Lynch Syndrome D003123
T4 121-126 DiseaseOrPhenotypicFeature denotes HNPCC DISEASE

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 128-136 OrganismTaxon denotes patients

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T4 76-80 GeneOrGeneProduct denotes MSH2
T3 67-71 GeneOrGeneProduct denotes MLH1
T78466 121-126 DiseaseOrPhenotypicFeature denotes HNPCC DISEASE
T52266 105-119 DiseaseOrPhenotypicFeature denotes Lynch Syndrome D003123
T18884 128-136 OrganismTaxon denotes patients

DisGeNET

Id Subject Object Predicate Lexical cue
T0 67-71 gene:4292 denotes MLH1
T1 105-119 disease:C1333990 denotes Lynch Syndrome
T2 67-71 gene:4292 denotes MLH1
T3 121-126 disease:C1333990 denotes HNPCC
T4 76-80 gene:4436 denotes MSH2
T5 105-119 disease:C1333990 denotes Lynch Syndrome
T6 76-80 gene:4436 denotes MSH2
T7 121-126 disease:C1333990 denotes HNPCC
R1 T0 T1 associated_with MLH1,Lynch Syndrome
R2 T2 T3 associated_with MLH1,HNPCC
R3 T4 T5 associated_with MSH2,Lynch Syndrome
R4 T6 T7 associated_with MSH2,HNPCC