PubMed:1653056
Annnotations
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 277-293 | HP_0002721 | denotes | immunodeficiency |
| T2 | 408-413 | HP_0002664 | denotes | tumor |
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-10 | protein | denotes | NF-kappa B |
| T2 | 25-52 | protein | denotes | tumor necrosis factor alpha |
| T3 | 60-78 | cell_line | denotes | Jurkat T cell line |
| T4 | 97-113 | protein | denotes | protein kinase A |
| T5 | 115-131 | protein | denotes | protein kinase C |
| T6 | 137-161 | protein | denotes | Ca(2+)-regulated kinases |
| T7 | 163-173 | protein | denotes | NF-kappa B |
| T8 | 179-208 | protein | denotes | DNA-binding regulatory factor |
| T9 | 271-311 | DNA | denotes | human immunodeficiency virus (HIV) genes |
| T10 | 316-323 | cell_type | denotes | T cells |
| T11 | 325-335 | protein | denotes | NF-kappa B |
| T12 | 408-435 | protein | denotes | tumor necrosis factor alpha |
| T13 | 437-446 | protein | denotes | TNF alpha |
| T14 | 518-528 | protein | denotes | NF-kappa B |
| T15 | 543-552 | protein | denotes | TNF alpha |
| T16 | 558-575 | cell_line | denotes | human T cell line |
| T17 | 577-583 | cell_line | denotes | Jurkat |
| T18 | 602-606 | cell_line | denotes | JCT6 |
| T19 | 643-646 | protein | denotes | PKA |
| T20 | 726-735 | protein | denotes | TNF alpha |
| T21 | 758-768 | protein | denotes | NF-kappa B |
| T22 | 835-844 | protein | denotes | TNF alpha |
| T23 | 920-923 | protein | denotes | PKC |
| T24 | 952-961 | protein | denotes | TNF alpha |
| T25 | 984-993 | protein | denotes | TNF alpha |
| T26 | 1123-1133 | protein | denotes | NF-kappa B |
| T27 | 1137-1149 | cell_line | denotes | Jurkat cells |
| T28 | 1157-1166 | protein | denotes | TNF alpha |
| T29 | 1175-1185 | protein | denotes | NF-kappa B |
| T30 | 1243-1267 | protein | denotes | signal-mediating kinases |
| T31 | 1276-1292 | protein | denotes | protein kinase C |
| T32 | 1294-1297 | protein | denotes | PKC |
| T33 | 1300-1316 | protein | denotes | protein kinase A |
| T34 | 1321-1345 | protein | denotes | Ca(2+)-regulated kinases |
| T35 | 1412-1422 | protein | denotes | NF-kappa B |
| T36 | 1442-1451 | protein | denotes | TNF alpha |
| T37 | 1456-1459 | protein | denotes | PKC |
| T38 | 1491-1501 | protein | denotes | NF-kappa B |
| T39 | 1501-1511 | protein | denotes | /I kappa B |
| T40 | 1547-1557 | protein | denotes | NF-kappa B |
semrep-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| E1-ti-1 | 0-10 | cui:C0079904 | denotes | NF-kappa B |
| E2-ti-1 | 25-52 | cui:C1448177 | denotes | tumor necrosis factor alpha |
| E3-ti-1 | 69-78 | cui:C0007600 | denotes | cell line |
| E4-ti-1 | 97-113 | cui:C0010531 | denotes | protein kinase A |
| E5-ti-1 | 115-131 | cui:C0033634 | denotes | protein kinase C |
| E6-ti-1 | 154-161 | cui:C0031727 | denotes | kinases |
| T1 | 11-21 | STIMULATES | denotes | activation |
| T2 | 53-55 | LOCATION_OF | denotes | in |
| E1-ab-1 | 163-173 | cui:C0079904 | denotes | NF-kappa B |
| E2-ab-1 | 179-190 | cui:C1148673 | denotes | DNA-binding |
| E3-ab-1 | 191-201 | cui:C0220905 | denotes | regulatory |
| E4-ab-1 | 202-208 | cui:C1521761 | denotes | factor |
| E5-ab-1 | 209-213 | cui:C1299581 | denotes | able |
| E6-ab-1 | 225-238 | cui:C0040649 | denotes | transcription |
| E7-ab-1 | 244-250 | cui:C0237753 | denotes | number |
| E8-ab-1 | 254-259 | cui:C0017337 | denotes | genes |
| E9-ab-1 | 271-299 | cui:C0019682 | denotes | human immunodeficiency virus |
| E10-ab-1 | 306-311 | cui:C0017337 | denotes | genes |
| E1-ab-2 | 316-323 | cui:C0039194 | denotes | T cells |
| E2-ab-2 | 325-335 | cui:C0079904 | denotes | NF-kappa B |
| E3-ab-2 | 354-362 | cui:C0178539 | denotes | cellular |
| E4-ab-2 | 376-390 | cui:C0031586 | denotes | phorbol esters |
| E5-ab-2 | 399-407 | cui:C0079189 | denotes | cytokine |
| E6-ab-2 | 408-435 | cui:C1456820 | denotes | tumor necrosis factor alpha |
| T3 | 399-435 | ISA | denotes | cytokine tumor necrosis factor alpha |
| E1-ab-3 | 456-463 | cui:C0150312 | denotes | present |
| E2-ab-3 | 464-468 | cui:C0043227 | denotes | work |
| E3-ab-3 | 490-499 | cui:C1521991 | denotes | molecular |
| E4-ab-3 | 500-506 | cui:C0441471 | denotes | events |
| E5-ab-3 | 518-528 | cui:C0079904 | denotes | NF-kappa B |
| E6-ab-3 | 543-552 | cui:C1448177 | denotes | TNF alpha |
| E7-ab-3 | 558-575 | cui:C0682523 | denotes | human T cell line |
| E8-ab-3 | 625-635 | cui:C0011155 | denotes | deficiency |
| E9-ab-3 | 643-646 | cui:C0010531 | denotes | PKA |
| E10-ab-3 | 647-659 | cui:C1160185 | denotes | transduction |
| E11-ab-3 | 660-667 | cui:C0243123 | denotes | pathway |
| T4 | 529-539 | STIMULATES | denotes | activation |
| T5 | 553-555 | LOCATION_OF | denotes | in |
| E1-ab-4 | 691-701 | cui:C0007600 | denotes | cell lines |
| E2-ab-4 | 708-721 | cui:C0031586 | denotes | phorbol ester |
| E3-ab-4 | 726-735 | cui:C1448177 | denotes | TNF alpha |
| E4-ab-4 | 741-745 | cui:C1299581 | denotes | able |
| E5-ab-4 | 758-768 | cui:C0079904 | denotes | NF-kappa B |
| T6 | 749-757 | STIMULATES | denotes | activate |
| T7 | 749-757 | STIMULATES | denotes | activate |
| E1-ab-5 | 770-777 | cui:C0070750 | denotes | Phorbol |
| E2-ab-5 | 817-820 | entrez:760 | denotes | Ca2 |
| E3-ab-5 | 835-844 | cui:C0439095 | denotes | TNF alpha |
| E4-ab-5 | 835-855 | cui:C1519684 | denotes | TNF alpha activation |
| E5-ab-5 | 860-863 | cui:C1518422 | denotes | not |
| E1-ab-6 | 884-887 | cui:C0048451 | denotes | PMA |
| E2-ab-6 | 920-933 | cui:C1514555 | denotes | PKC inhibitor |
| E3-ab-6 | 952-961 | cui:C1448177 | denotes | TNF alpha |
| E4-ab-6 | 962-968 | cui:C1280500 | denotes | effect |
| E5-ab-6 | 973-982 | cui:C0442739 | denotes | unchanged |
| E1-ab-7 | 984-993 | cui:C1448177 | denotes | TNF alpha |
| E2-ab-7 | 998-1001 | cui:C1518422 | denotes | not |
| E3-ab-7 | 1011-1015 | entrez:820 | denotes | cAMP |
| E4-ab-7 | 1016-1026 | cui:C0033268 | denotes | production |
| E5-ab-7 | 1046-1049 | cui:C1518422 | denotes | not |
| E6-ab-7 | 1063-1067 | entrez:820 | denotes | cAMP |
| T8 | 1002-1010 | STIMULATES | denotes | activate |
| E1-ab-8 | 1090-1094 | entrez:820 | denotes | cAMP |
| E2-ab-8 | 1110-1113 | cui:C1518422 | denotes | not |
| E3-ab-8 | 1123-1133 | cui:C0079904 | denotes | NF-kappa B |
| E4-ab-8 | 1137-1149 | cui:C0376448 | denotes | Jurkat cells |
| T9 | 1134-1136 | LOCATION_OF | denotes | in |
| E1-ab-9 | 1157-1166 | cui:C0439095 | denotes | TNF alpha |
| E2-ab-9 | 1167-1174 | cui:C0205263 | denotes | induced |
| E3-ab-9 | 1175-1185 | cui:C0079904 | denotes | NF-kappa B |
| E4-ab-9 | 1157-1196 | cui:C1519684 | denotes | TNF alpha-induced NF-kappa B activation |
| E5-ab-9 | 1237-1242 | cui:C0205164 | denotes | major |
| E6-ab-9 | 1260-1267 | cui:C0031727 | denotes | kinases |
| E7-ab-9 | 1276-1292 | cui:C0033634 | denotes | protein kinase C |
| E8-ab-9 | 1300-1316 | cui:C0010531 | denotes | protein kinase A |
| E9-ab-9 | 1338-1345 | cui:C0031727 | denotes | kinases |
| T10 | 1260-1292 | ISA | denotes | kinases such as protein kinase C |
| E1-ab-10 | 1374-1385 | cui:C0521449 | denotes | cytoplasmic |
| E2-ab-10 | 1386-1399 | cui:C1522821 | denotes | acidification |
| E3-ab-10 | 1412-1422 | cui:C0079904 | denotes | NF-kappa B |
| E4-ab-10 | 1442-1451 | cui:C1448177 | denotes | TNF alpha |
| E5-ab-10 | 1456-1459 | cui:C0033634 | denotes | PKC |
| E6-ab-10 | 1466-1475 | cui:C0441712 | denotes | mechanism |
| E7-ab-10 | 1491-1502 | cui:C0079904 | denotes | NF-kappa B/ |
| E8-ab-10 | 1512-1524 | cui:C0086168 | denotes | dissociation |
| E9-ab-10 | 1533-1542 | cui:C0392760 | denotes | affecting |
| E10-ab-10 | 1547-1557 | cui:C0079904 | denotes | NF-kappa B |
| E11-ab-10 | 1572-1576 | cui:C1261552 | denotes | step |
| T11 | 1423-1433 | STIMULATES | denotes | activation |
| T12 | 1423-1433 | STIMULATES | denotes | activation |
| T13 | 1481-1490 | AUGMENTS | denotes | increases |
| T14 | 1481-1490 | AUGMENTS | denotes | increases |
| R1 | E2-ti-1 | T1 | subjectOf | tumor necrosis factor alpha,activation |
| R2 | E1-ti-1 | T1 | objectOf | NF-kappa B,activation |
| R3 | E3-ti-1 | T2 | subjectOf | cell line,in |
| R4 | E2-ti-1 | T2 | objectOf | tumor necrosis factor alpha,in |
| R5 | E6-ab-2 | T3 | subjectOf | tumor necrosis factor alpha,cytokine tumor necrosis factor alpha |
| R6 | E5-ab-2 | T3 | objectOf | cytokine,cytokine tumor necrosis factor alpha |
| R7 | E6-ab-3 | T4 | subjectOf | TNF alpha,activation |
| R8 | E5-ab-3 | T4 | objectOf | NF-kappa B,activation |
| R9 | E7-ab-3 | T5 | subjectOf | human T cell line,in |
| R10 | E6-ab-3 | T5 | objectOf | TNF alpha,in |
| R11 | E3-ab-4 | T6 | subjectOf | TNF alpha,activate |
| R12 | E5-ab-4 | T6 | objectOf | NF-kappa B,activate |
| R13 | E2-ab-4 | T7 | subjectOf | phorbol ester,activate |
| R14 | E5-ab-4 | T7 | objectOf | NF-kappa B,activate |
| R15 | E1-ab-7 | T8 | subjectOf | TNF alpha,activate |
| R16 | E3-ab-7 | T8 | objectOf | cAMP,activate |
| R17 | E4-ab-8 | T9 | subjectOf | Jurkat cells,in |
| R18 | E3-ab-8 | T9 | objectOf | NF-kappa B,in |
| R19 | E7-ab-9 | T10 | subjectOf | protein kinase C,kinases such as protein kinase C |
| R20 | E6-ab-9 | T10 | objectOf | kinases,kinases such as protein kinase C |
| R21 | E4-ab-10 | T11 | subjectOf | TNF alpha,activation |
| R22 | E3-ab-10 | T11 | objectOf | NF-kappa B,activation |
| R23 | E5-ab-10 | T12 | subjectOf | PKC,activation |
| R24 | E3-ab-10 | T12 | objectOf | NF-kappa B,activation |
| R25 | E5-ab-10 | T13 | subjectOf | PKC,increases |
| R26 | E8-ab-10 | T13 | objectOf | dissociation,increases |
| R27 | E4-ab-10 | T14 | subjectOf | TNF alpha,increases |
| R28 | E8-ab-10 | T14 | objectOf | dissociation,increases |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-162 | Sentence | denotes | NF-kappa B activation by tumor necrosis factor alpha in the Jurkat T cell line is independent of protein kinase A, protein kinase C, and Ca(2+)-regulated kinases. |
| S2 | 163-312 | Sentence | denotes | NF-kappa B is a DNA-binding regulatory factor able to control transcription of a number of genes, including human immunodeficiency virus (HIV) genes. |
| S3 | 313-448 | Sentence | denotes | In T cells, NF-kappa B is activated upon cellular treatment by phorbol esters and the cytokine tumor necrosis factor alpha (TNF alpha). |
| S4 | 449-668 | Sentence | denotes | In the present work, we investigated the molecular events leading to NF-kappa B activation by TNF alpha in a human T cell line (Jurkat) and its subclone JCT6, which presents a deficiency in the PKA transduction pathway. |
| S5 | 669-769 | Sentence | denotes | We found that in both cell lines, both phorbol ester and TNF alpha were able to activate NF-kappa B. |
| S6 | 770-864 | Sentence | denotes | Phorbol activation was positively modulated by Ca2+ influx while TNF alpha activation was not. |
| S7 | 865-983 | Sentence | denotes | Furthermore, while PMA activation was inhibited by the PKC inhibitor staurosporin, the TNF alpha effect was unchanged. |
| S8 | 984-1079 | Sentence | denotes | TNF alpha did not activate cAMP production and its signal was not modulated by cAMP activators. |
| S9 | 1080-1150 | Sentence | denotes | Moreover, cAMP activators did not activate NF-kappa B in Jurkat cells. |
| S10 | 1151-1346 | Sentence | denotes | Thus, TNF alpha-induced NF-kappa B activation was found to be mediated by none of the major signal-mediating kinases such as protein kinase C (PKC), protein kinase A, or Ca(2+)-regulated kinases. |
| S11 | 1347-1577 | Sentence | denotes | Furthermore, we found that cytoplasmic acidification facilitated NF-kappa B activation by both TNF alpha and PKC, by a mechanism that increases NF-kappa B/I kappa B dissociation without affecting the NF-kappa B translocation step. |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C2 | 0-10 | NP | denotes | NF-kappa B |
| C1 | 0-21 | NP | denotes | NF-kappa B activation |
| C3 | 25-52 | NP | denotes | tumor necrosis factor alpha |
| C5 | 56-73 | NP | denotes | the Jurkat T cell |
| C4 | 56-78 | NP | denotes | the Jurkat T cell line |
| C7 | 115-131 | NP | denotes | protein kinase C |
| C6 | 97-161 | NP | denotes | protein kinase A, protein kinase C, and Ca(2+)-regulated kinases |
| C8 | 163-173 | NP | denotes | NF-kappa B |
| C9 | 316-323 | NP | denotes | T cells |
| C10 | 325-335 | NP | denotes | NF-kappa B |
| C11 | 395-447 | NP | denotes | the cytokine tumor necrosis factor alpha (TNF alpha) |
| C13 | 518-528 | NP | denotes | NF-kappa B |
| C12 | 518-539 | NP | denotes | NF-kappa B activation |
| C14 | 543-552 | NP | denotes | TNF alpha |
| C17 | 556-570 | NP | denotes | a human T cell |
| C16 | 556-584 | NP | denotes | a human T cell line (Jurkat) |
| C19 | 589-592 | NP | denotes | its |
| C18 | 589-606 | NP | denotes | its subclone JCT6 |
| C15 | 556-606 | NP | denotes | a human T cell line (Jurkat) and its subclone JCT6 |
| C20 | 608-613 | NP | denotes | which |
| C21 | 686-701 | NP | denotes | both cell lines |
| C22 | 726-735 | NP | denotes | TNF alpha |
| C23 | 758-768 | NP | denotes | NF-kappa B |
| C24 | 984-993 | NP | denotes | TNF alpha |
| C25 | 1031-1034 | NP | denotes | its |
| C26 | 1063-1078 | NP | denotes | cAMP activators |
| C27 | 1090-1105 | NP | denotes | cAMP activators |
| C28 | 1123-1133 | NP | denotes | NF-kappa B |
| C29 | 1137-1149 | NP | denotes | Jurkat cells |
| C31 | 1175-1185 | NP | denotes | NF-kappa B |
| C30 | 1175-1196 | NP | denotes | NF-kappa B activation |
| C33 | 1276-1298 | NP | denotes | protein kinase C (PKC) |
| C32 | 1276-1345 | NP | denotes | protein kinase C (PKC), protein kinase A, or Ca(2+)-regulated kinases |
| C35 | 1412-1422 | NP | denotes | NF-kappa B |
| C34 | 1412-1433 | NP | denotes | NF-kappa B activation |
| C36 | 1442-1451 | NP | denotes | TNF alpha |
| C37 | 1456-1459 | NP | denotes | PKC |
| C38 | 1464-1475 | NP | denotes | a mechanism |
| C39 | 1476-1480 | NP | denotes | that |
| C40 | 1491-1501 | NP | denotes | NF-kappa B |
| R1 | C8 | C2 | coref-ident | NF-kappa B,NF-kappa B |
| R2 | C9 | C5 | coref-ident | T cells,the Jurkat T cell |
| R3 | C10 | C8 | coref-ident | NF-kappa B,NF-kappa B |
| R4 | C11 | C3 | coref-ident | the cytokine tumor necrosis factor alpha (TNF alpha),tumor necrosis factor alpha |
| R5 | C13 | C10 | coref-ident | NF-kappa B,NF-kappa B |
| R6 | C12 | C1 | coref-ident | NF-kappa B activation,NF-kappa B activation |
| R7 | C14 | C11 | coref-ident | TNF alpha,the cytokine tumor necrosis factor alpha (TNF alpha) |
| R8 | C17 | C9 | coref-ident | a human T cell,T cells |
| R9 | C16 | C4 | coref-ident | a human T cell line (Jurkat),the Jurkat T cell line |
| R10 | C19 | C17 | coref-pron | its,a human T cell |
| R11 | C20 | C18 | coref-relat | which,its subclone JCT6 |
| R12 | C21 | C15 | coref-ident | both cell lines,a human T cell line (Jurkat) and its subclone JCT6 |
| R13 | C22 | C14 | coref-ident | TNF alpha,TNF alpha |
| R14 | C23 | C13 | coref-ident | NF-kappa B,NF-kappa B |
| R15 | C24 | C22 | coref-ident | TNF alpha,TNF alpha |
| R16 | C25 | C24 | coref-pron | its,TNF alpha |
| R17 | C27 | C26 | coref-ident | cAMP activators,cAMP activators |
| R18 | C28 | C23 | coref-ident | NF-kappa B,NF-kappa B |
| R19 | C29 | C17 | coref-ident | Jurkat cells,a human T cell |
| R20 | C31 | C28 | coref-ident | NF-kappa B,NF-kappa B |
| R21 | C30 | C12 | coref-ident | NF-kappa B activation,NF-kappa B activation |
| R22 | C33 | C7 | coref-ident | protein kinase C (PKC),protein kinase C |
| R23 | C32 | C6 | coref-ident | "protein kinase C (PKC), protein kinase A, or Ca(2+)-regulated kinases","protein kinase A, protein kinase C, and Ca(2+)-regulated kinases" |
| R24 | C35 | C31 | coref-ident | NF-kappa B,NF-kappa B |
| R25 | C34 | C30 | coref-ident | NF-kappa B activation,NF-kappa B activation |
| R26 | C36 | C24 | coref-ident | TNF alpha,TNF alpha |
| R27 | C37 | C33 | coref-ident | PKC,protein kinase C (PKC) |
| R28 | C39 | C38 | coref-relat | that,a mechanism |
| R29 | C40 | C35 | coref-ident | NF-kappa B,NF-kappa B |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-10 | protein_molecule | denotes | NF-kappa B |
| T2 | 25-52 | protein_molecule | denotes | tumor necrosis factor alpha |
| T3 | 60-78 | cell_line | denotes | Jurkat T cell line |
| T4 | 97-113 | protein_molecule | denotes | protein kinase A |
| T5 | 115-131 | protein_molecule | denotes | protein kinase C |
| T6 | 137-143 | atom | denotes | Ca(2+) |
| T7 | 163-173 | protein_molecule | denotes | NF-kappa B |
| T8 | 179-208 | protein_molecule | denotes | DNA-binding regulatory factor |
| T9 | 225-238 | other_name | denotes | transcription |
| T10 | 271-299 | virus | denotes | human immunodeficiency virus |
| T11 | 301-304 | virus | denotes | HIV |
| T12 | 316-323 | cell_type | denotes | T cells |
| T13 | 325-335 | protein_molecule | denotes | NF-kappa B |
| T14 | 354-372 | other_name | denotes | cellular treatment |
| T15 | 376-390 | other_organic_compound | denotes | phorbol esters |
| T16 | 408-435 | protein_molecule | denotes | tumor necrosis factor alpha |
| T17 | 437-446 | protein_molecule | denotes | TNF alpha |
| T18 | 518-528 | protein_molecule | denotes | NF-kappa B |
| T19 | 543-552 | protein_molecule | denotes | TNF alpha |
| T20 | 558-575 | cell_line | denotes | human T cell line |
| T21 | 577-583 | cell_line | denotes | Jurkat |
| T22 | 602-606 | cell_line | denotes | JCT6 |
| T23 | 643-646 | protein_molecule | denotes | PKA |
| T24 | 708-721 | other_organic_compound | denotes | phorbol ester |
| T25 | 726-735 | protein_molecule | denotes | TNF alpha |
| T26 | 758-768 | protein_molecule | denotes | NF-kappa B |
| T27 | 817-821 | atom | denotes | Ca2+ |
| T28 | 835-844 | protein_molecule | denotes | TNF alpha |
| T29 | 884-887 | other_organic_compound | denotes | PMA |
| T30 | 920-923 | protein_molecule | denotes | PKC |
| T31 | 934-946 | other_organic_compound | denotes | staurosporin |
| T32 | 952-961 | protein_molecule | denotes | TNF alpha |
| T33 | 984-993 | protein_molecule | denotes | TNF alpha |
| T34 | 1011-1015 | nucleotide | denotes | cAMP |
| T35 | 1063-1067 | nucleotide | denotes | cAMP |
| T36 | 1090-1094 | nucleotide | denotes | cAMP |
| T37 | 1123-1133 | protein_molecule | denotes | NF-kappa B |
| T38 | 1137-1149 | cell_line | denotes | Jurkat cells |
| T39 | 1157-1166 | protein_molecule | denotes | TNF alpha |
| T40 | 1175-1185 | protein_molecule | denotes | NF-kappa B |
| T41 | 1243-1267 | protein_family_or_group | denotes | signal-mediating kinases |
| T42 | 1276-1292 | protein_molecule | denotes | protein kinase C |
| T43 | 1294-1297 | protein_molecule | denotes | PKC |
| T44 | 1300-1316 | protein_molecule | denotes | protein kinase A |
| T45 | 1321-1345 | protein_family_or_group | denotes | Ca(2+)-regulated kinases |
| T46 | 1374-1399 | other_name | denotes | cytoplasmic acidification |
| T47 | 1412-1422 | protein_molecule | denotes | NF-kappa B |
| T48 | 1442-1451 | protein_molecule | denotes | TNF alpha |
| T49 | 1456-1459 | protein_molecule | denotes | PKC |
| T50 | 1491-1501 | protein_molecule | denotes | NF-kappa B |
| T51 | 1501-1511 | protein_molecule | denotes | /I kappa B |
| T52 | 1547-1557 | protein_molecule | denotes | NF-kappa B |
metamap-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1301-1317 | C0010531 | denotes | rotein kinase A, |
| T2 | 98-114 | C0010531 | denotes | rotein kinase A, |
| T3 | 1457-1460 | C0033634 | denotes | KC, |
| T4 | 116-132 | C0033634 | denotes | rotein kinase C, |
| T5 | 1443-1452 | C1456820 | denotes | NF alpha |
| T6 | 1158-1167 | C1456820 | denotes | NF alpha- |
| T7 | 985-994 | C1456820 | denotes | NF alpha |
| T8 | 953-962 | C1456820 | denotes | NF alpha |
| T9 | 836-845 | C1456820 | denotes | NF alpha |
| T10 | 727-736 | C1456820 | denotes | NF alpha |
| T11 | 544-552 | C1456820 | denotes | NF alpha |
| T12 | 409-436 | C1456820 | denotes | umor necrosis factor alpha |
| T13 | 26-53 | C1456820 | denotes | umor necrosis factor alpha |
| T14 | 1339-1346 | C0031727 | denotes | inases. |
| T15 | 155-162 | C0031727 | denotes | inases. |
| T16 | 1176-1186 | C0079904 | denotes | F-kappa B |
| T17 | 1124-1134 | C0079904 | denotes | F-kappa B |
| T18 | 759-769 | C0079904 | denotes | F-kappa B. |
| T19 | 519-529 | C0079904 | denotes | F-kappa B |
| T20 | 326-336 | C0079904 | denotes | F-kappa B |
| T21 | 164-174 | C0079904 | denotes | F-kappa B |
| T22 | 1-11 | C0079904 | denotes | F-kappa B |
| T23 | 692-702 | C0007600 | denotes | ell lines, |
| T24 | 70-79 | C0007600 | denotes | ell line |
| T25 | 1329-1338 | C0851285 | denotes | egulated |
| T26 | 145-154 | C0851285 | denotes | egulated |
| T27 | 1322-1326 | C0596235 | denotes | a(2+ |
| T28 | 818-821 | C0596235 | denotes | a2+ |
| T29 | 138-142 | C0596235 | denotes | a(2+ |
| T30 | 836-856 | C1519684 | denotes | NF alpha activation |
| T31 | 1424-1434 | C1879547 | denotes | ctivation |
| T32 | 1187-1197 | C1879547 | denotes | ctivation |
| T33 | 889-899 | C1879547 | denotes | ctivation |
| T34 | 530-540 | C1879547 | denotes | ctivation |
| T35 | 340-349 | C1879547 | denotes | ctivated |
| T36 | 12-22 | C1879547 | denotes | ctivation |
| T37 | 83-97 | C0332291 | denotes | ndependent of |
| T38 | 1443-1452 | C2003941 | denotes | NF alpha |
| T39 | 1158-1167 | C2003941 | denotes | NF alpha- |
| T40 | 836-845 | C2003941 | denotes | NF alpha |
| T41 | 48-53 | C2003941 | denotes | lpha |
| T42 | 709-722 | C0031586 | denotes | horbol ester |
| T43 | 377-391 | C0031586 | denotes | horbol esters |
| T44 | 1091-1094 | C0050063 | denotes | AMP |
| T45 | 317-324 | C0039194 | denotes | cells, |
| T46 | 364-373 | C0039798 | denotes | reatment |
| T47 | 272-300 | C0019682 | denotes | uman immunodeficiency virus |
| T48 | 885-888 | C0039654 | denotes | MA |
| T49 | 1138-1150 | C0376448 | denotes | urkat cells. |
| T50 | 1111-1114 | C1518422 | denotes | ot |
| T51 | 861-864 | C1518422 | denotes | ot. |
| T52 | 178-183 | C0000702 | denotes | DNA- |
| T53 | 1364-1369 | C0150312 | denotes | ound |
| T54 | 1202-1207 | C0150312 | denotes | ound |
| T55 | 673-678 | C0150312 | denotes | ound |
| T56 | 457-464 | C0150312 | denotes | resent |
| T57 | 615-623 | C0150312 | denotes | resents |
| T58 | 307-312 | C0017337 | denotes | enes. |
| T59 | 771-777 | C0031588 | denotes | horbol |
| T60 | 1559-1572 | C0040715 | denotes | ranslocation |
| T61 | 1115-1123 | C1515877 | denotes | ctivate |
| T62 | 1003-1011 | C1515877 | denotes | ctivate |
| T63 | 750-758 | C1515877 | denotes | ctivate |
| T64 | 1375-1386 | C0010834 | denotes | ytoplasmic |
| T65 | 400-408 | C0079189 | denotes | ytokine |
| T66 | 626-636 | C1623416 | denotes | eficiency |
| T67 | 1244-1250 | C1710082 | denotes | ignal- |
| T68 | 1036-1042 | C1710082 | denotes | ignal |
| T69 | 1051-1060 | C0443264 | denotes | odulated |
| T70 | 805-814 | C0443264 | denotes | odulated |
| T71 | 742-746 | C1299581 | denotes | ble |
| T72 | 210-214 | C1299581 | denotes | ble |
| T73 | 465-469 | C0043227 | denotes | ork, |
| T74 | 1513-1525 | C0086168 | denotes | issociation |
| T75 | 974-983 | C2346711 | denotes | nchanged. |
| T76 | 184-191 | C1167622 | denotes | inding |
| T77 | 262-271 | C0332257 | denotes | ncluding |
| T78 | 1482-1491 | C0442805 | denotes | ncreases |
| T79 | 474-486 | C1292732 | denotes | nvestigated |
| T80 | 1467-1476 | C0441712 | denotes | echanism |
| T81 | 1251-1260 | C0086597 | denotes | ediating |
| T82 | 218-225 | C1882979 | denotes | ontrol |
| T83 | 1208-1210 | C1883351 | denotes | o |
| T84 | 1387-1399 | C1522821 | denotes | cidification |
| T85 | 501-507 | C0441471 | denotes | vents |
| T86 | 1017-1027 | C0033268 | denotes | roduction |
| T87 | 921-933 | C1514555 | denotes | KC inhibitor |
| T88 | 203-209 | C1521761 | denotes | actor |
| T89 | 963-969 | C1280500 | denotes | ffect |
| T90 | 1573-1577 | C1704379 | denotes | tep. |
| T91 | 355-363 | C0007634 | denotes | ellular |
| T92 | 508-515 | C1522538 | denotes | eading |
| T93 | 1238-1242 | C0205164 | denotes | ajor |
| T94 | 1214-1222 | C0127400 | denotes | ediated |
| T95 | 1226-1230 | C0549184 | denotes | one |
| T96 | 904-913 | C0311403 | denotes | nhibited |
| T97 | 491-500 | C1521991 | denotes | olecular |
| T98 | 594-602 | C1883178 | denotes | ubclone |
| T99 | 192-202 | C1704735 | denotes | egulatory |
| T100 | 1168-1174 | C0205263 | denotes | nduced |
| T101 | 245-251 | C0237753 | denotes | umber |
| T102 | 661-668 | C1704259 | denotes | athway. |
| T103 | 648-660 | C1160185 | denotes | ransduction |
| T104 | 1534-1543 | C0392760 | denotes | ffecting |
| T105 | 1503-1504 | C0221138 | denotes | |
| T106 | 1495-1500 | C0439099 | denotes | appa |