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PubMed:16461379 JSONTXT

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Oryza-OGER

Id Subject Object Predicate Lexical cue
T1 0-7 http://purl.obolibrary.org/obo/CHEBI_11122 denotes Protein
T2 0-7 http://purl.obolibrary.org/obo/SO_0000104 denotes Protein
T3 0-7 http://purl.obolibrary.org/obo/PR_000000001 denotes Protein
T4 0-7 http://purl.obolibrary.org/obo/CHEBI_16541 denotes Protein
T5 0-7 http://purl.obolibrary.org/obo/GO_0003675 denotes Protein
T6 0-7 http://purl.obolibrary.org/obo/CHEBI_36080 denotes Protein
T7 52-55 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T8 52-55 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T9 83-87 http://purl.obolibrary.org/obo/SO_0000409 denotes site
T10 83-87 http://purl.obolibrary.org/obo/SO_0000839 denotes site
T11 83-87 http://purl.obolibrary.org/obo/SO_0000408 denotes site
T12 88-91 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T13 88-91 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T14 131-138 http://id.nlm.nih.gov/mesh/D004798 denotes enzymes
T15 156-159 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T16 161-164 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T17 161-164 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T18 165-169 http://purl.obolibrary.org/obo/PR_P01012 denotes oval
T19 181-186 http://purl.obolibrary.org/obo/CHEBI_18059 denotes lipid
T20 187-191 http://purl.obolibrary.org/obo/PR_Q9V3C5 denotes rich
T21 214-217 http://purl.obolibrary.org/obo/UBERON_0014899 denotes all
T22 214-217 http://id.nlm.nih.gov/mesh/D054198 denotes all
T23 214-217 http://purl.obolibrary.org/obo/CHEBI_37690 denotes all
T24 218-225 http://purl.obolibrary.org/obo/GO_0009536 denotes plastid
T25 262-265 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T26 262-265 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T27 275-278 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T28 287-295 http://id.nlm.nih.gov/mesh/D011809 denotes quinones
T29 287-295 http://purl.obolibrary.org/obo/CHEBI_36141 denotes quinones
T30 287-295 http://id.nlm.nih.gov/mesh/D011809 denotes quinones
T31 297-302 http://purl.obolibrary.org/obo/PR_000001067 denotes alpha
T32 297-302 http://purl.obolibrary.org/obo/CHEBI_30216 denotes alpha
T33 297-313 http://purl.bioontology.org/ontology/RXNORM/237099 denotes alpha-tocopherol
T34 297-313 http://id.nlm.nih.gov/mesh/D024502 denotes alpha-tocopherol
T35 297-313 http://id.nlm.nih.gov/mesh/D024502 denotes alpha-tocopherol
T36 297-313 http://purl.obolibrary.org/obo/CHEBI_22470 denotes alpha-tocopherol
T37 297-313 http://purl.obolibrary.org/obo/CHEBI_18145 denotes alpha-tocopherol
T38 297-313 http://purl.obolibrary.org/obo/CHEBI_46430 denotes alpha-tocopherol
T39 303-313 http://purl.obolibrary.org/obo/CHEBI_27013 denotes tocopherol
T40 303-313 http://id.nlm.nih.gov/mesh/D024505 denotes tocopherol
T41 303-313 http://id.nlm.nih.gov/mesh/D024505 denotes tocopherol
T42 303-313 http://purl.bioontology.org/ontology/RXNORM/1236136 denotes tocopherol
T43 315-318 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T44 315-318 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T45 319-325 http://id.nlm.nih.gov/mesh/D008055 denotes lipids
T46 319-325 http://purl.obolibrary.org/obo/CHEBI_18059 denotes lipids
T47 319-325 http://id.nlm.nih.gov/mesh/D008055 denotes lipids
T48 326-329 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T49 326-329 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T50 348-359 http://id.nlm.nih.gov/mesh/D002338 denotes carotenoids
T51 348-359 http://purl.obolibrary.org/obo/CHEBI_23044 denotes carotenoids
T52 348-359 http://id.nlm.nih.gov/mesh/D002338 denotes carotenoids
T53 375-378 http://purl.obolibrary.org/obo/PR_Q9VVR1 denotes not
T54 375-378 http://purl.obolibrary.org/obo/PR_000011409 denotes not
T55 375-378 http://purl.obolibrary.org/obo/PR_P43354 denotes not
T56 375-378 http://purl.obolibrary.org/obo/PR_000003944 denotes not
T57 375-378 http://purl.obolibrary.org/obo/PR_Q5TIS6 denotes not
T58 375-378 http://purl.obolibrary.org/obo/PR_Q92685 denotes not
T59 375-378 http://purl.obolibrary.org/obo/PR_Q8K2A8 denotes not
T60 375-378 http://purl.obolibrary.org/obo/PR_000011336 denotes not
T61 393-396 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T62 409-416 http://id.nlm.nih.gov/mesh/D004798 denotes enzymes
T63 431-439 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T64 431-439 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T65 465-473 http://id.nlm.nih.gov/mesh/D020543 denotes proteome
T66 477-480 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T67 511-514 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T68 511-514 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T69 536-547 http://id.nlm.nih.gov/mesh/D017360 denotes Arabidopsis
T70 549-560 http://id.nlm.nih.gov/mesh/D017360 denotes Arabidopsis
T71 549-569 http://www.ncbi.nlm.nih.gov/taxonomy/3702 denotes Arabidopsis thaliana
T72 549-569 http://id.nlm.nih.gov/mesh/D017360 denotes Arabidopsis thaliana
T73 587-593 http://web.expasy.org/cellosaurus/CVCL_D957 denotes pepper
T74 595-603 http://id.nlm.nih.gov/mesh/D002212 denotes Capsicum
T75 595-603 http://purl.bioontology.org/ontology/RXNORM/319780 denotes Capsicum
T76 595-610 http://www.ncbi.nlm.nih.gov/taxonomy/4072 denotes Capsicum annuum
T77 595-610 http://id.nlm.nih.gov/mesh/D002212 denotes Capsicum annuum
T78 612-617 http://purl.bioontology.org/ontology/RXNORM/476718 denotes fruit
T79 666-670 http://purl.obolibrary.org/obo/PR_000024065 denotes this
T80 666-670 http://purl.obolibrary.org/obo/PR_O32583 denotes this
T81 687-695 http://id.nlm.nih.gov/mesh/D020543 denotes proteome
T82 699-710 http://purl.obolibrary.org/obo/GO_0009507 denotes chloroplast
T83 699-710 ALK denotes chloroplast
T84 699-710 CAB1R denotes chloroplast
T85 699-710 SBE1 denotes chloroplast
T86 699-710 GS2 denotes chloroplast
T87 711-714 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T88 733-743 http://id.nlm.nih.gov/mesh/D000071837 denotes fibrillins
T89 755-764 http://www.uniprot.org/uniprot/P98005 denotes a protein
T90 755-764 http://www.uniprot.org/uniprot/P09676 denotes a protein
T91 755-764 http://www.uniprot.org/uniprot/P07928 denotes a protein
T92 755-764 http://www.uniprot.org/uniprot/P15966 denotes a protein
T93 755-764 http://www.uniprot.org/uniprot/P03610 denotes a protein
T94 755-764 http://www.uniprot.org/uniprot/P25244 denotes a protein
T95 755-764 http://www.uniprot.org/uniprot/P07394 denotes a protein
T96 755-764 http://www.uniprot.org/uniprot/P03632 denotes a protein
T97 755-764 http://www.uniprot.org/uniprot/P25243 denotes a protein
T98 755-764 http://www.uniprot.org/uniprot/P35823 denotes a protein
T99 755-764 http://www.uniprot.org/uniprot/O64306 denotes a protein
T100 757-764 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T101 757-764 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T102 757-764 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T103 757-764 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T104 757-764 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T105 757-764 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T106 765-769 http://purl.obolibrary.org/obo/UBERON_0010166 denotes coat
T107 770-773 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T108 770-773 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T109 804-807 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T110 809-812 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T111 809-812 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T112 830-838 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T113 830-838 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T114 858-868 http://purl.obolibrary.org/obo/GO_0008152 denotes metabolism
T115 872-882 http://purl.obolibrary.org/obo/CHEBI_24913 denotes isoprenoid
T116 891-900 http://purl.obolibrary.org/obo/CHEBI_25367 denotes molecules
T117 911-914 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T118 911-914 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T119 932-938 http://id.nlm.nih.gov/mesh/D008055 denotes lipids
T120 932-938 http://purl.obolibrary.org/obo/CHEBI_18059 denotes lipids
T121 932-938 http://id.nlm.nih.gov/mesh/D008055 denotes lipids
T122 940-943 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T123 940-943 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T124 944-954 http://purl.obolibrary.org/obo/CHEBI_23044 denotes carotenoid
T125 970-977 http://www.ncbi.nlm.nih.gov/taxonomy/32644 denotes unknown
T126 978-981 http://purl.obolibrary.org/obo/PR_000023218 denotes ABC
T127 978-981 http://purl.obolibrary.org/obo/CHEBI_421707 denotes ABC
T128 978-981 http://purl.obolibrary.org/obo/PR_P30750 denotes ABC
T129 978-982 http://purl.obolibrary.org/obo/PR_Q6AI08 denotes ABC1
T130 978-982 http://purl.obolibrary.org/obo/PR_P27697 denotes ABC1
T131 978-982 http://purl.obolibrary.org/obo/PR_Q5A762 denotes ABC1
T132 978-982 http://purl.obolibrary.org/obo/PR_Q9SBB2 denotes ABC1
T133 978-982 http://www.uniprot.org/uniprot/P41233 denotes ABC1
T134 978-982 http://purl.obolibrary.org/obo/PR_000003537 denotes ABC1
T135 978-982 http://www.uniprot.org/uniprot/O95477 denotes ABC1
T136 978-982 http://purl.obolibrary.org/obo/PR_Q92338 denotes ABC1
T137 978-982 http://purl.obolibrary.org/obo/PR_Q92337 denotes ABC1
T138 978-982 http://purl.obolibrary.org/obo/PR_Q84M24 denotes ABC1
T139 978-982 http://purl.obolibrary.org/obo/PR_P41233 denotes ABC1
T140 978-982 http://purl.obolibrary.org/obo/PR_O22056 denotes ABC1
T141 978-982 http://purl.obolibrary.org/obo/PR_000008498 denotes ABC1
T142 978-982 http://web.expasy.org/cellosaurus/CVCL_1066 denotes ABC1
T143 978-982 http://purl.obolibrary.org/obo/PR_O95477 denotes ABC1
T144 983-990 http://id.nlm.nih.gov/mesh/D010770 denotes kinases
T145 1029-1039 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T146 1043-1050 http://purl.obolibrary.org/obo/CHEBI_16509 denotes quinone
T147 1043-1050 http://purl.obolibrary.org/obo/CHEBI_36141 denotes quinone
T148 1043-1050 http://id.nlm.nih.gov/mesh/C004532 denotes quinone
T149 1043-1050 http://id.nlm.nih.gov/mesh/C004532 denotes quinone
T150 1051-1065 http://id.nlm.nih.gov/mesh/D006899 denotes monooxygenases
T151 1072-1080 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T152 1072-1080 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T153 1086-1089 http://purl.obolibrary.org/obo/PR_Q9VVR1 denotes not
T154 1086-1089 http://purl.obolibrary.org/obo/PR_000011409 denotes not
T155 1086-1089 http://purl.obolibrary.org/obo/PR_P43354 denotes not
T156 1086-1089 http://purl.obolibrary.org/obo/PR_000003944 denotes not
T157 1086-1089 http://purl.obolibrary.org/obo/PR_Q5TIS6 denotes not
T158 1086-1089 http://purl.obolibrary.org/obo/PR_Q92685 denotes not
T159 1086-1089 http://purl.obolibrary.org/obo/PR_Q8K2A8 denotes not
T160 1086-1089 http://purl.obolibrary.org/obo/PR_000011336 denotes not
T161 1121-1130 http://purl.obolibrary.org/obo/SO_0000732 denotes predicted
T162 1142-1153 http://purl.obolibrary.org/obo/GO_0009507 denotes chloroplast
T163 1142-1153 ALK denotes chloroplast
T164 1142-1153 CAB1R denotes chloroplast
T165 1142-1153 SBE1 denotes chloroplast
T166 1142-1153 GS2 denotes chloroplast
T167 1142-1170 http://id.nlm.nih.gov/mesh/C078737 denotes chloroplast transit peptides
T168 1154-1161 http://purl.obolibrary.org/obo/SO_0000725 denotes transit
T169 1162-1170 http://id.nlm.nih.gov/mesh/D010455 denotes peptides
T170 1162-1170 http://id.nlm.nih.gov/mesh/D010455 denotes peptides
T171 1162-1170 http://purl.obolibrary.org/obo/CHEBI_16670 denotes peptides
T172 1171-1174 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T173 1171-1174 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T174 1175-1179 http://purl.obolibrary.org/obo/PR_Q9V853 denotes lack
T175 1180-1193 http://purl.obolibrary.org/obo/SO_0001077 denotes transmembrane
T176 1180-1193 http://purl.obolibrary.org/obo/GO_0044214 denotes transmembrane
T177 1180-1193 http://purl.obolibrary.org/obo/GO_0016021 denotes transmembrane
T178 1219-1231 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T179 1242-1247 http://purl.obolibrary.org/obo/CHEBI_18059 denotes lipid
T180 1332-1337 http://purl.obolibrary.org/obo/CHEBI_30212 denotes light
T181 1332-1337 http://purl.obolibrary.org/obo/PR_Q9QYH9 denotes light
T182 1332-1337 http://purl.obolibrary.org/obo/PR_000002222 denotes light
T183 1332-1337 http://purl.obolibrary.org/obo/PR_O43557 denotes light
T184 1345-1348 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T185 1345-1348 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T186 1422-1434 http://purl.bioontology.org/ontology/RXNORM/4530 denotes formaldehyde
T187 1422-1434 http://id.nlm.nih.gov/mesh/D005557 denotes formaldehyde
T188 1422-1434 http://id.nlm.nih.gov/mesh/D005557 denotes formaldehyde
T189 1422-1434 http://purl.obolibrary.org/obo/CHEBI_16842 denotes formaldehyde
T190 1449-1457 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T191 1449-1457 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T192 1484-1492 http://id.nlm.nih.gov/mesh/D020543 denotes proteome
T193 1496-1502 http://web.expasy.org/cellosaurus/CVCL_D957 denotes pepper
T194 1532-1539 http://id.nlm.nih.gov/mesh/D004798 denotes enzymes
T195 1543-1553 http://purl.obolibrary.org/obo/CHEBI_23044 denotes carotenoid
T196 1543-1566 http://purl.obolibrary.org/obo/GO_0016117 denotes carotenoid biosynthesis
T197 1554-1566 http://purl.obolibrary.org/obo/GO_0009058 denotes biosynthesis
T198 1567-1570 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T199 1567-1570 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T200 1591-1599 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T201 1591-1599 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T202 1616-1627 http://purl.obolibrary.org/obo/GO_0009507 denotes chloroplast
T203 1616-1627 ALK denotes chloroplast
T204 1616-1627 CAB1R denotes chloroplast
T205 1616-1627 SBE1 denotes chloroplast
T206 1616-1627 GS2 denotes chloroplast
T207 1628-1631 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T208 1664-1667 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T209 1729-1743 http://purl.obolibrary.org/obo/GO_0005637 denotes inner envelope
T210 1735-1743 http://purl.obolibrary.org/obo/GO_0031975 denotes envelope
T211 1735-1743 http://purl.obolibrary.org/obo/GO_0009274 denotes envelope
T212 1744-1747 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T213 1744-1747 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T214 1748-1757 http://purl.obolibrary.org/obo/GO_0009579 denotes thylakoid
T215 1768-1771 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T216 1768-1771 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T217 1779-1783 http://purl.obolibrary.org/obo/UBERON_2002175 denotes role
T218 1779-1783 http://purl.obolibrary.org/obo/CHEBI_50906 denotes role
T219 1787-1796 http://purl.obolibrary.org/obo/GO_0009056 denotes breakdown
T220 1800-1811 http://id.nlm.nih.gov/mesh/D002338 denotes carotenoids
T221 1800-1811 http://purl.obolibrary.org/obo/CHEBI_23044 denotes carotenoids
T222 1800-1811 http://id.nlm.nih.gov/mesh/D002338 denotes carotenoids
T223 1812-1815 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T224 1812-1815 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T225 1850-1853 http://id.nlm.nih.gov/mesh/C535773 denotes PGs
T226 1870-1873 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T227 1870-1873 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T228 1889-1893 http://purl.obolibrary.org/obo/SO_0000409 denotes site
T229 1889-1893 http://purl.obolibrary.org/obo/SO_0000839 denotes site
T230 1889-1893 http://purl.obolibrary.org/obo/SO_0000408 denotes site
T231 1894-1897 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T232 1894-1897 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T233 1898-1908 http://purl.obolibrary.org/obo/CHEBI_23044 denotes carotenoid

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 587-593 http://identifiers.org/oryzabase.gene/19093 denotes pepper
T2 699-710 http://identifiers.org/oryzabase.gene/757 denotes chloroplast
T3 699-710 http://identifiers.org/oryzabase.gene/7333 denotes chloroplast
T4 699-710 http://identifiers.org/oryzabase.gene/730 denotes chloroplast
T5 699-710 http://identifiers.org/oryzabase.gene/6056 denotes chloroplast
T6 978-982 http://identifiers.org/oryzabase.gene/9313 denotes ABC1
T7 1142-1153 http://identifiers.org/oryzabase.gene/757 denotes chloroplast
T8 1142-1153 http://identifiers.org/oryzabase.gene/7333 denotes chloroplast
T9 1142-1153 http://identifiers.org/oryzabase.gene/730 denotes chloroplast
T10 1142-1153 http://identifiers.org/oryzabase.gene/6056 denotes chloroplast
T11 1239-1241 http://identifiers.org/oryzabase.gene/19094 denotes PG
T12 1297-1299 http://identifiers.org/oryzabase.gene/19094 denotes PG
T13 1481-1483 http://identifiers.org/oryzabase.gene/19094 denotes PG
T14 1496-1502 http://identifiers.org/oryzabase.gene/19093 denotes pepper
T15 1616-1627 http://identifiers.org/oryzabase.gene/757 denotes chloroplast
T16 1616-1627 http://identifiers.org/oryzabase.gene/7333 denotes chloroplast
T17 1616-1627 http://identifiers.org/oryzabase.gene/730 denotes chloroplast
T18 1616-1627 http://identifiers.org/oryzabase.gene/6056 denotes chloroplast
T4026 39-51 http://identifiers.org/ricegap/LOC_Os09g17740 denotes chloroplasts
T65622 39-51 http://identifiers.org/ricegap/LOC_Os06g51084 denotes chloroplasts
T50880 39-51 http://identifiers.org/ricegap/LOC_Os06g12450 denotes chloroplasts
T79035 39-51 http://identifiers.org/ricegap/LOC_Os04g56400 denotes chloroplasts
T50817 56-68 http://identifiers.org/ricegap/LOC_Os02g47510 denotes chromoplasts
T12276 334-346 http://identifiers.org/ricegap/LOC_Os02g47510 denotes chromoplasts
T78255 486-498 http://identifiers.org/ricegap/LOC_Os09g17740 denotes chloroplasts
T36900 486-498 http://identifiers.org/ricegap/LOC_Os06g51084 denotes chloroplasts
T97505 486-498 http://identifiers.org/ricegap/LOC_Os06g12450 denotes chloroplasts
T33515 486-498 http://identifiers.org/ricegap/LOC_Os04g56400 denotes chloroplasts
T33201 587-593 http://identifiers.org/ricegap/LOC_Os10g27470 denotes pepper
T53863 618-630 http://identifiers.org/ricegap/LOC_Os02g47510 denotes chromoplasts
T57243 699-710 http://identifiers.org/ricegap/LOC_Os09g17740 denotes chloroplast
T22540 699-710 http://identifiers.org/ricegap/LOC_Os06g51084 denotes chloroplast
T60454 699-710 http://identifiers.org/ricegap/LOC_Os06g12450 denotes chloroplast
T19191 699-710 http://identifiers.org/ricegap/LOC_Os04g56400 denotes chloroplast
T41370 978-982 http://identifiers.org/ricegap/LOC_Os07g46460 denotes ABC1
T42047 1142-1153 http://identifiers.org/ricegap/LOC_Os09g17740 denotes chloroplast
T19 1142-1153 http://identifiers.org/ricegap/LOC_Os06g51084 denotes chloroplast
T20 1142-1153 http://identifiers.org/ricegap/LOC_Os06g12450 denotes chloroplast
T21 1142-1153 http://identifiers.org/ricegap/LOC_Os04g56400 denotes chloroplast
T22 1239-1241 http://identifiers.org/ricegap/LOC_Os01g07790 denotes PG
T23 1297-1299 http://identifiers.org/ricegap/LOC_Os01g07790 denotes PG
T24 1481-1483 http://identifiers.org/ricegap/LOC_Os01g07790 denotes PG
T25 1496-1502 http://identifiers.org/ricegap/LOC_Os10g27470 denotes pepper
T26 1503-1515 http://identifiers.org/ricegap/LOC_Os02g47510 denotes chromoplasts
T27 1616-1627 http://identifiers.org/ricegap/LOC_Os09g17740 denotes chloroplast
T28 1616-1627 http://identifiers.org/ricegap/LOC_Os06g51084 denotes chloroplast
T29 1616-1627 http://identifiers.org/ricegap/LOC_Os06g12450 denotes chloroplast
T30 1616-1627 http://identifiers.org/ricegap/LOC_Os04g56400 denotes chloroplast
T31 1671-1683 http://identifiers.org/ricegap/LOC_Os09g17740 denotes chloroplasts
T32 1671-1683 http://identifiers.org/ricegap/LOC_Os06g51084 denotes chloroplasts
T33 1671-1683 http://identifiers.org/ricegap/LOC_Os06g12450 denotes chloroplasts
T34 1671-1683 http://identifiers.org/ricegap/LOC_Os04g56400 denotes chloroplasts
T35 1857-1869 http://identifiers.org/ricegap/LOC_Os02g47510 denotes chromoplasts
T74715 39-51 http://identifiers.org/rapdb.locus/Os09g0346500 denotes chloroplasts
T30056 39-51 http://identifiers.org/rapdb.locus/Os06g0726400 denotes chloroplasts
T8000 39-51 http://identifiers.org/rapdb.locus/Os06g0229800 denotes chloroplasts
T26197 39-51 http://identifiers.org/rapdb.locus/Os04g0659100 denotes chloroplasts
T77662 56-68 http://identifiers.org/rapdb.locus/Os02g0704000 denotes chromoplasts
T59220 334-346 http://identifiers.org/rapdb.locus/Os02g0704000 denotes chromoplasts
T59484 486-498 http://identifiers.org/rapdb.locus/Os09g0346500 denotes chloroplasts
T10438 486-498 http://identifiers.org/rapdb.locus/Os06g0726400 denotes chloroplasts
T15767 486-498 http://identifiers.org/rapdb.locus/Os06g0229800 denotes chloroplasts
T22373 486-498 http://identifiers.org/rapdb.locus/Os04g0659100 denotes chloroplasts
T4541 587-593 http://identifiers.org/rapdb.locus/Os10g0414700 denotes pepper
T21455 618-630 http://identifiers.org/rapdb.locus/Os02g0704000 denotes chromoplasts
T32561 699-710 http://identifiers.org/rapdb.locus/Os09g0346500 denotes chloroplast
T93802 699-710 http://identifiers.org/rapdb.locus/Os06g0726400 denotes chloroplast
T49443 699-710 http://identifiers.org/rapdb.locus/Os06g0229800 denotes chloroplast
T71113 699-710 http://identifiers.org/rapdb.locus/Os04g0659100 denotes chloroplast
T73893 978-982 http://identifiers.org/rapdb.locus/Os07g0658400 denotes ABC1
T39163 1142-1153 http://identifiers.org/rapdb.locus/Os09g0346500 denotes chloroplast
T15084 1142-1153 http://identifiers.org/rapdb.locus/Os06g0726400 denotes chloroplast
T38543 1142-1153 http://identifiers.org/rapdb.locus/Os06g0229800 denotes chloroplast
T64083 1142-1153 http://identifiers.org/rapdb.locus/Os04g0659100 denotes chloroplast
T31579 1239-1241 http://identifiers.org/rapdb.locus/Os01g0172900 denotes PG
T34743 1297-1299 http://identifiers.org/rapdb.locus/Os01g0172900 denotes PG
T37652 1481-1483 http://identifiers.org/rapdb.locus/Os01g0172900 denotes PG
T16918 1496-1502 http://identifiers.org/rapdb.locus/Os10g0414700 denotes pepper
T28237 1503-1515 http://identifiers.org/rapdb.locus/Os02g0704000 denotes chromoplasts
T33802 1616-1627 http://identifiers.org/rapdb.locus/Os09g0346500 denotes chloroplast
T42671 1616-1627 http://identifiers.org/rapdb.locus/Os06g0726400 denotes chloroplast
T57910 1616-1627 http://identifiers.org/rapdb.locus/Os06g0229800 denotes chloroplast
T64279 1616-1627 http://identifiers.org/rapdb.locus/Os04g0659100 denotes chloroplast
T68999 1671-1683 http://identifiers.org/rapdb.locus/Os09g0346500 denotes chloroplasts
T88692 1671-1683 http://identifiers.org/rapdb.locus/Os06g0726400 denotes chloroplasts
T98872 1671-1683 http://identifiers.org/rapdb.locus/Os06g0229800 denotes chloroplasts
T69434 1671-1683 http://identifiers.org/rapdb.locus/Os04g0659100 denotes chloroplasts
T26282 1857-1869 http://identifiers.org/rapdb.locus/Os02g0704000 denotes chromoplasts
T60844 699-710 http://identifiers.org/uniprot/Q0DDE3 denotes chloroplast
T33753 699-710 http://identifiers.org/uniprot/Q01HZ7 denotes chloroplast
T48319 699-710 http://identifiers.org/uniprot/Q01401 denotes chloroplast
T24249 699-710 http://identifiers.org/uniprot/P14655-2 denotes chloroplast
T26326 699-710 http://identifiers.org/uniprot/P14655 denotes chloroplast
T104 699-710 http://identifiers.org/uniprot/P12330 denotes chloroplast
T31967 699-710 http://identifiers.org/uniprot/D0TZI4 denotes chloroplast
T16196 699-710 http://identifiers.org/uniprot/A3BFK2 denotes chloroplast
T39830 978-982 http://identifiers.org/uniprot/Q69RJ0 denotes ABC1
T49694 1142-1153 http://identifiers.org/uniprot/Q0DDE3 denotes chloroplast
T10037 1142-1153 http://identifiers.org/uniprot/Q01HZ7 denotes chloroplast
T31839 1142-1153 http://identifiers.org/uniprot/Q01401 denotes chloroplast
T1787 1142-1153 http://identifiers.org/uniprot/P14655-2 denotes chloroplast
T71941 1142-1153 http://identifiers.org/uniprot/P14655 denotes chloroplast
T81493 1142-1153 http://identifiers.org/uniprot/P12330 denotes chloroplast
T82628 1142-1153 http://identifiers.org/uniprot/D0TZI4 denotes chloroplast
T5877 1142-1153 http://identifiers.org/uniprot/A3BFK2 denotes chloroplast
T7955 1239-1241 http://identifiers.org/uniprot/B9ETD9 denotes PG
T81681 1297-1299 http://identifiers.org/uniprot/B9ETD9 denotes PG
T4619 1481-1483 http://identifiers.org/uniprot/B9ETD9 denotes PG
T5801 1616-1627 http://identifiers.org/uniprot/Q0DDE3 denotes chloroplast
T45742 1616-1627 http://identifiers.org/uniprot/Q01HZ7 denotes chloroplast
T76744 1616-1627 http://identifiers.org/uniprot/Q01401 denotes chloroplast
T61019 1616-1627 http://identifiers.org/uniprot/P14655-2 denotes chloroplast
T71692 1616-1627 http://identifiers.org/uniprot/P14655 denotes chloroplast
T22221 1616-1627 http://identifiers.org/uniprot/P12330 denotes chloroplast
T38964 1616-1627 http://identifiers.org/uniprot/D0TZI4 denotes chloroplast
T4030 1616-1627 http://identifiers.org/uniprot/A3BFK2 denotes chloroplast
M_0 699-714 hunflair:NA:Gene denotes chloroplast PGs
M_1 1616-1631 hunflair:NA:Gene denotes chloroplast PGs
M_2 297-313 hunflair:NA:Chemical denotes alpha-tocopherol
M_3 156-159 hunflair:NA:Chemical denotes PGs
M_4 275-278 hunflair:NA:Chemical denotes PGs
M_5 393-396 hunflair:NA:Chemical denotes PGs
M_6 477-480 hunflair:NA:Chemical denotes PGs
M_7 711-714 hunflair:NA:Chemical denotes PGs
M_8 804-807 hunflair:NA:Chemical denotes PGs
M_9 1628-1631 hunflair:NA:Chemical denotes PGs
M_10 1664-1667 hunflair:NA:Chemical denotes PGs
M_11 1850-1853 hunflair:NA:Chemical denotes PGs
M_12 1043-1050 hunflair:NA:Chemical denotes quinone
M_13 549-569 hunflair:NA:Species denotes Arabidopsis thaliana
M_14 39-51 hunflair:NA:Gene denotes chloroplasts
M_15 486-498 hunflair:NA:Gene denotes chloroplasts
M_16 1671-1683 hunflair:NA:Gene denotes chloroplasts
M_17 733-743 hunflair:NA:Gene denotes fibrillins
M_18 1043-1065 hunflair:NA:Gene denotes quinone monooxygenases
M_19 1422-1434 hunflair:NA:Chemical denotes formaldehyde
M_20 978-990 hunflair:NA:Gene denotes ABC1 kinases
M_21 902-910 hunflair:NA:Chemical denotes quinines
M_22 536-547 hunflair:NA:Species denotes Arabidopsis
M_23 549-560 hunflair:NA:Species denotes Arabidopsis
M_24 699-710 hunflair:NA:Gene denotes chloroplast
M_25 1142-1153 hunflair:NA:Gene denotes chloroplast
M_26 1616-1627 hunflair:NA:Gene denotes chloroplast
M_27 595-610 hunflair:NA:Species denotes Capsicum annuum
M_28 872-882 hunflair:NA:Chemical denotes isoprenoid
M_29 287-295 hunflair:NA:Chemical denotes quinones
M_30 21-35 hunflair:NA:Gene denotes plastoglobules
M_31 56-68 hunflair:NA:Gene denotes chromoplasts
M_32 334-346 hunflair:NA:Gene denotes chromoplasts
M_33 618-630 hunflair:NA:Gene denotes chromoplasts
M_34 1503-1515 hunflair:NA:Gene denotes chromoplasts
M_35 1857-1869 hunflair:NA:Gene denotes chromoplasts
M_36 587-593 hunflair:NA:Species denotes pepper
M_37 1496-1502 hunflair:NA:Species denotes pepper
M_38 915-929 hunflair:NA:Chemical denotes tocochromanols

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 587-593 http://identifiers.org/oryzabase.gene/19093 denotes pepper
T2 1496-1502 http://identifiers.org/oryzabase.gene/19093 denotes pepper

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 978-982 http://identifiers.org/oryzabase.gene/9313 denotes ABC1
T2 1239-1241 http://identifiers.org/oryzabase.gene/19094 denotes PG
T3 1297-1299 http://identifiers.org/oryzabase.gene/19094 denotes PG
T4 1481-1483 http://identifiers.org/oryzabase.gene/19094 denotes PG
T82832 978-982 http://identifiers.org/rapdb.locus/Os07g0658400 denotes ABC1
T50976 1239-1241 http://identifiers.org/rapdb.locus/Os01g0172900 denotes PG
T99964 1297-1299 http://identifiers.org/rapdb.locus/Os01g0172900 denotes PG
T74683 1481-1483 http://identifiers.org/rapdb.locus/Os01g0172900 denotes PG

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 699-714 hunflair:NA:Gene denotes chloroplast PGs
M_1 1616-1631 hunflair:NA:Gene denotes chloroplast PGs
M_2 297-313 hunflair:NA:Chemical denotes alpha-tocopherol
M_3 156-159 hunflair:NA:Chemical denotes PGs
M_4 275-278 hunflair:NA:Chemical denotes PGs
M_5 393-396 hunflair:NA:Chemical denotes PGs
M_6 477-480 hunflair:NA:Chemical denotes PGs
M_7 711-714 hunflair:NA:Chemical denotes PGs
M_8 804-807 hunflair:NA:Chemical denotes PGs
M_9 1628-1631 hunflair:NA:Chemical denotes PGs
M_10 1664-1667 hunflair:NA:Chemical denotes PGs
M_11 1850-1853 hunflair:NA:Chemical denotes PGs
M_12 1043-1050 hunflair:NA:Chemical denotes quinone
M_13 549-569 hunflair:NA:Species denotes Arabidopsis thaliana
M_14 39-51 hunflair:NA:Gene denotes chloroplasts
M_15 486-498 hunflair:NA:Gene denotes chloroplasts
M_16 1671-1683 hunflair:NA:Gene denotes chloroplasts
M_17 733-743 hunflair:NA:Gene denotes fibrillins
M_18 1043-1065 hunflair:NA:Gene denotes quinone monooxygenases
M_19 1422-1434 hunflair:NA:Chemical denotes formaldehyde
M_20 978-990 hunflair:NA:Gene denotes ABC1 kinases
M_21 902-910 hunflair:NA:Chemical denotes quinines
M_22 536-547 hunflair:NA:Species denotes Arabidopsis
M_23 549-560 hunflair:NA:Species denotes Arabidopsis
M_24 699-710 hunflair:NA:Gene denotes chloroplast
M_25 1142-1153 hunflair:NA:Gene denotes chloroplast
M_26 1616-1627 hunflair:NA:Gene denotes chloroplast
M_27 595-610 hunflair:NA:Species denotes Capsicum annuum
M_28 872-882 hunflair:NA:Chemical denotes isoprenoid
M_29 287-295 hunflair:NA:Chemical denotes quinones
M_30 21-35 hunflair:NA:Gene denotes plastoglobules
M_31 56-68 hunflair:NA:Gene denotes chromoplasts
M_32 334-346 hunflair:NA:Gene denotes chromoplasts
M_33 618-630 hunflair:NA:Gene denotes chromoplasts
M_34 1503-1515 hunflair:NA:Gene denotes chromoplasts
M_35 1857-1869 hunflair:NA:Gene denotes chromoplasts
M_36 587-593 hunflair:NA:Species denotes pepper
M_37 1496-1502 hunflair:NA:Species denotes pepper
M_38 915-929 hunflair:NA:Chemical denotes tocochromanols

LocText

Id Subject Object Predicate Lexical cue
T1 39-51 go:GO:0009507 denotes chloroplasts
T2 56-68 go:GO:0009509 denotes chromoplasts
T3 218-225 go:GO:0009536 denotes plastid
T4 334-346 go:GO:0009509 denotes chromoplasts
T5 486-498 go:GO:0009507 denotes chloroplasts
T6 536-547 taxonomy:3702 denotes Arabidopsis
T7 549-569 taxonomy:3702 denotes Arabidopsis thaliana
T8 587-593 taxonomy:4072 denotes pepper
T9 595-610 taxonomy:4072 denotes Capsicum annuum
T10 618-630 go:GO:0009509 denotes chromoplasts
T11 699-710 go:GO:0009507 denotes chloroplast
T12 1142-1153 go:GO:0009507 denotes chloroplast
T13 1496-1502 taxonomy:4072 denotes pepper
T14 1503-1515 go:GO:0009509 denotes chromoplasts
T15 1616-1627 go:GO:0009507 denotes chloroplast
T16 1671-1683 go:GO:0009507 denotes chloroplasts
T17 1748-1767 go:GO:0042651 denotes thylakoid membranes
T18 1857-1869 go:GO:0009509 denotes chromoplasts

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-69 Sentence denotes Protein profiling of plastoglobules in chloroplasts and chromoplasts.
T2 70-139 Sentence denotes A surprising site for differential accumulation of metabolic enzymes.
T3 140-274 Sentence denotes Plastoglobules (PGs) are oval or tubular lipid-rich structures present in all plastid types, but their specific functions are unclear.
T4 275-368 Sentence denotes PGs contain quinones, alpha-tocopherol, and lipids and, in chromoplasts, carotenoids as well.
T5 369-440 Sentence denotes It is not known whether PGs contain any enzymes or regulatory proteins.
T6 441-655 Sentence denotes Here, we determined the proteome of PGs from chloroplasts of stressed and unstressed leaves of Arabidopsis (Arabidopsis thaliana) as well as from pepper (Capsicum annuum) fruit chromoplasts using mass spectrometry.
T7 656-964 Sentence denotes Together, this showed that the proteome of chloroplast PGs consists of seven fibrillins, providing a protein coat and preventing coalescence of the PGs, and an additional 25 proteins likely involved in metabolism of isoprenoid-derived molecules (quinines and tocochromanols), lipids, and carotenoid cleavage.
T8 965-1066 Sentence denotes Four unknown ABC1 kinases were identified, possibly involved in regulation of quinone monooxygenases.
T9 1067-1268 Sentence denotes Most proteins have not been observed earlier but have predicted N-terminal chloroplast transit peptides and lack transmembrane domains, consistent with localization in the PG lipid monolayer particles.
T10 1269-1435 Sentence denotes Quantitative differences in PG composition in response to high light stress and degreening were determined by differential stable-isotope labeling using formaldehyde.
T11 1436-1632 Sentence denotes More than 20 proteins were identified in the PG proteome of pepper chromoplasts, including four enzymes of carotenoid biosynthesis and several homologs of proteins observed in the chloroplast PGs.
T12 1633-1921 Sentence denotes Our data strongly suggest that PGs in chloroplasts form a functional metabolic link between the inner envelope and thylakoid membranes and play a role in breakdown of carotenoids and oxidative stress defense, whereas PGs in chromoplasts are also an active site for carotenoid conversions.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-69 Sentence denotes Protein profiling of plastoglobules in chloroplasts and chromoplasts.
T2 70-139 Sentence denotes A surprising site for differential accumulation of metabolic enzymes.
T3 140-274 Sentence denotes Plastoglobules (PGs) are oval or tubular lipid-rich structures present in all plastid types, but their specific functions are unclear.
T4 275-368 Sentence denotes PGs contain quinones, alpha-tocopherol, and lipids and, in chromoplasts, carotenoids as well.
T5 369-440 Sentence denotes It is not known whether PGs contain any enzymes or regulatory proteins.
T6 441-655 Sentence denotes Here, we determined the proteome of PGs from chloroplasts of stressed and unstressed leaves of Arabidopsis (Arabidopsis thaliana) as well as from pepper (Capsicum annuum) fruit chromoplasts using mass spectrometry.
T7 656-964 Sentence denotes Together, this showed that the proteome of chloroplast PGs consists of seven fibrillins, providing a protein coat and preventing coalescence of the PGs, and an additional 25 proteins likely involved in metabolism of isoprenoid-derived molecules (quinines and tocochromanols), lipids, and carotenoid cleavage.
T8 965-1066 Sentence denotes Four unknown ABC1 kinases were identified, possibly involved in regulation of quinone monooxygenases.
T9 1067-1268 Sentence denotes Most proteins have not been observed earlier but have predicted N-terminal chloroplast transit peptides and lack transmembrane domains, consistent with localization in the PG lipid monolayer particles.
T10 1269-1435 Sentence denotes Quantitative differences in PG composition in response to high light stress and degreening were determined by differential stable-isotope labeling using formaldehyde.
T11 1436-1632 Sentence denotes More than 20 proteins were identified in the PG proteome of pepper chromoplasts, including four enzymes of carotenoid biosynthesis and several homologs of proteins observed in the chloroplast PGs.
T12 1633-1921 Sentence denotes Our data strongly suggest that PGs in chloroplasts form a functional metabolic link between the inner envelope and thylakoid membranes and play a role in breakdown of carotenoids and oxidative stress defense, whereas PGs in chromoplasts are also an active site for carotenoid conversions.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-69 Sentence denotes Protein profiling of plastoglobules in chloroplasts and chromoplasts.
T2 70-139 Sentence denotes A surprising site for differential accumulation of metabolic enzymes.
T3 140-274 Sentence denotes Plastoglobules (PGs) are oval or tubular lipid-rich structures present in all plastid types, but their specific functions are unclear.
T4 275-368 Sentence denotes PGs contain quinones, alpha-tocopherol, and lipids and, in chromoplasts, carotenoids as well.
T5 369-440 Sentence denotes It is not known whether PGs contain any enzymes or regulatory proteins.
T6 441-655 Sentence denotes Here, we determined the proteome of PGs from chloroplasts of stressed and unstressed leaves of Arabidopsis (Arabidopsis thaliana) as well as from pepper (Capsicum annuum) fruit chromoplasts using mass spectrometry.
T7 656-964 Sentence denotes Together, this showed that the proteome of chloroplast PGs consists of seven fibrillins, providing a protein coat and preventing coalescence of the PGs, and an additional 25 proteins likely involved in metabolism of isoprenoid-derived molecules (quinines and tocochromanols), lipids, and carotenoid cleavage.
T8 965-1066 Sentence denotes Four unknown ABC1 kinases were identified, possibly involved in regulation of quinone monooxygenases.
T9 1067-1268 Sentence denotes Most proteins have not been observed earlier but have predicted N-terminal chloroplast transit peptides and lack transmembrane domains, consistent with localization in the PG lipid monolayer particles.
T10 1269-1435 Sentence denotes Quantitative differences in PG composition in response to high light stress and degreening were determined by differential stable-isotope labeling using formaldehyde.
T11 1436-1632 Sentence denotes More than 20 proteins were identified in the PG proteome of pepper chromoplasts, including four enzymes of carotenoid biosynthesis and several homologs of proteins observed in the chloroplast PGs.
T12 1633-1921 Sentence denotes Our data strongly suggest that PGs in chloroplasts form a functional metabolic link between the inner envelope and thylakoid membranes and play a role in breakdown of carotenoids and oxidative stress defense, whereas PGs in chromoplasts are also an active site for carotenoid conversions.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-69 Sentence denotes Protein profiling of plastoglobules in chloroplasts and chromoplasts.
T2 70-139 Sentence denotes A surprising site for differential accumulation of metabolic enzymes.
T3 140-274 Sentence denotes Plastoglobules (PGs) are oval or tubular lipid-rich structures present in all plastid types, but their specific functions are unclear.
T4 275-368 Sentence denotes PGs contain quinones, alpha-tocopherol, and lipids and, in chromoplasts, carotenoids as well.
T5 369-440 Sentence denotes It is not known whether PGs contain any enzymes or regulatory proteins.
T6 441-655 Sentence denotes Here, we determined the proteome of PGs from chloroplasts of stressed and unstressed leaves of Arabidopsis (Arabidopsis thaliana) as well as from pepper (Capsicum annuum) fruit chromoplasts using mass spectrometry.
T7 656-964 Sentence denotes Together, this showed that the proteome of chloroplast PGs consists of seven fibrillins, providing a protein coat and preventing coalescence of the PGs, and an additional 25 proteins likely involved in metabolism of isoprenoid-derived molecules (quinines and tocochromanols), lipids, and carotenoid cleavage.
T8 965-1066 Sentence denotes Four unknown ABC1 kinases were identified, possibly involved in regulation of quinone monooxygenases.
T9 1067-1268 Sentence denotes Most proteins have not been observed earlier but have predicted N-terminal chloroplast transit peptides and lack transmembrane domains, consistent with localization in the PG lipid monolayer particles.
T10 1269-1435 Sentence denotes Quantitative differences in PG composition in response to high light stress and degreening were determined by differential stable-isotope labeling using formaldehyde.
T11 1436-1632 Sentence denotes More than 20 proteins were identified in the PG proteome of pepper chromoplasts, including four enzymes of carotenoid biosynthesis and several homologs of proteins observed in the chloroplast PGs.
T12 1633-1921 Sentence denotes Our data strongly suggest that PGs in chloroplasts form a functional metabolic link between the inner envelope and thylakoid membranes and play a role in breakdown of carotenoids and oxidative stress defense, whereas PGs in chromoplasts are also an active site for carotenoid conversions.