PubMed:16410744 / 1456-1797 JSONTXT

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PubTator4TogoVar

Id Subject Object Predicate Lexical cue proteinmutation
16410744_0 43-60 ProteinMutation denotes codon 787 CAG/CAA rs1050171

LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 43-48 OrganismTaxon denotes codon NCBItxid:79338

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T11 0-341 Sentence denotes The allele frequencies of polymorphisms at codon 787 CAG/CAA (Gln/Gln) in glioblastomas in Japan were G/G (82.4%), G/A (10.8%), A/A (6.8%), corresponding to G 0.878 versus A 0.122, significantly different from those in glioblastomas in Switzerland: G/G (27.2%), G/A (28.4%), A/A (44.4%), corresponding to G 0.414 versus A 0.586 (p < 0.0001).

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
2729 43-60 SequenceVariant denotes codon 787 CAG/CAA p|SUB|Q|787|Q
2730 62-69 SequenceVariant denotes Gln/Gln p|SUB|Q||Q
2731 74-87 DiseaseOrPhenotypicFeature denotes glioblastomas MESH:D005909
2732 219-232 DiseaseOrPhenotypicFeature denotes glioblastomas MESH:D005909

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T12 74-87 DiseaseOrPhenotypicFeature denotes glioblastomas 0018177
T13 219-232 DiseaseOrPhenotypicFeature denotes glioblastomas 0018177

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T11 62-65 GeneOrGeneProduct denotes Gln
T12 66-69 GeneOrGeneProduct denotes Gln

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T29 11-22 GeneOrGeneProduct denotes frequencies
T30 53-56 GeneOrGeneProduct denotes CAG
T31 62-65 GeneOrGeneProduct denotes Gln
T32 66-69 GeneOrGeneProduct denotes Gln

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T13 74-87 DiseaseOrPhenotypicFeature denotes glioblastomas D005909
T14 219-232 DiseaseOrPhenotypicFeature denotes glioblastomas D005909

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T7 62-65 GeneOrGeneProduct denotes Gln
T8 66-69 GeneOrGeneProduct denotes Gln

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T3 57-60 DiseaseOrPhenotypicFeature denotes CAA 0011921

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T14 74-87 DiseaseOrPhenotypicFeature denotes glioblastomas D005909
T15 219-232 DiseaseOrPhenotypicFeature denotes glioblastomas D005909

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T13 74-87 DiseaseOrPhenotypicFeature denotes glioblastomas D005909
T14 219-232 DiseaseOrPhenotypicFeature denotes glioblastomas D005909

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 57-60 ChemicalEntity denotes CAA http://purl.obolibrary.org/obo/CHEBI_27869
T2 62-65 ChemicalEntity denotes Gln http://purl.obolibrary.org/obo/CHEBI_30011
T3 66-69 ChemicalEntity denotes Gln http://purl.obolibrary.org/obo/CHEBI_30011

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T3 66-69 ChemicalEntity denotes Gln http://purl.obolibrary.org/obo/CHEBI_30011
T2 62-65 ChemicalEntity denotes Gln http://purl.obolibrary.org/obo/CHEBI_30011
T1 57-60 ChemicalEntity denotes CAA http://purl.obolibrary.org/obo/CHEBI_27869
T8 66-69 GeneOrGeneProduct denotes Gln
T7 62-65 GeneOrGeneProduct denotes Gln
T14 219-232 DiseaseOrPhenotypicFeature denotes glioblastomas D005909
T13 74-87 DiseaseOrPhenotypicFeature denotes glioblastomas D005909

PubmedHPO

Id Subject Object Predicate Lexical cue
T12 74-87 HP_0100843 denotes glioblastomas
T13 219-232 HP_0100843 denotes glioblastomas

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
16410744-10#57#60#gene10194 57-60 gene10194 denotes CAA
16410744-10#219#232#diseaseC0017636 219-232 diseaseC0017636 denotes glioblastomas
57#60#gene10194219#232#diseaseC0017636 16410744-10#57#60#gene10194 16410744-10#219#232#diseaseC0017636 associated_with CAA,glioblastomas

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 43-60 DNAMutation:|SUB|CAG|CODON787|CAA denotes codon 787 CAG/CAA