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PubMed:16371368 / 0-318 JSONTXT

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sonoma2

Id Subject Object Predicate Lexical cue
T-0 108-117 VAR denotes Mutations
T-1 121-126 GENE denotes SHP-2
T-2 144-149 REG denotes cause
T-3 150-165 POSREG denotes hyperactivation
T-4 173-191 MPA denotes catalytic activity
T-5 202-212 REG denotes identified
T-6 222-231 DISEASE denotes leukemias
T-7 246-278 DISEASE denotes juvenile myelomonocytic leukemia
T-8 289-302 REG denotes characterized
R-0 T-0 T-2 CauseOf Mutations,cause
R-1 T-0 T-3 CauseOf Mutations,hyperactivation
R-3 T-1 T-0 ThemeOf SHP-2,Mutations
R-4 T-4 T-3 ThemeOf catalytic activity,hyperactivation
R-5 T-4 T-5 ThemeOf catalytic activity,identified
R-6 T-6 T-3 ThemeOf leukemias,hyperactivation
R-7 T-6 T-5 ThemeOf leukemias,identified
R-8 T-6 T-8 ThemeOf leukemias,characterized
R-10 T-7 T-2 ThemeOf juvenile myelomonocytic leukemia,cause
R-11 T-7 T-3 ThemeOf juvenile myelomonocytic leukemia,hyperactivation
R-12 T-7 T-5 ThemeOf juvenile myelomonocytic leukemia,identified
R-13 T-7 T-8 ThemeOf juvenile myelomonocytic leukemia,characterized

sonoma

Id Subject Object Predicate Lexical cue
T-0 0-7 REG denotes Effects
T-1 33-49 POSREG denotes gain-of-function
T-2 50-58 VAR denotes mutation
T-3 62-79 GENE denotes SHP-2 phosphatase
T-4 108-117 VAR denotes Mutations
T-5 121-138 GENE denotes SHP-2 phosphatase
T-6 144-149 REG denotes cause
T-7 150-165 POSREG denotes hyperactivation
T-8 173-191 MPA denotes catalytic activity
T-9 202-212 REG denotes identified
T-10 222-231 DISEASE denotes leukemias
T-11 246-278 DISEASE denotes juvenile myelomonocytic leukemia
T-12 289-302 REG denotes characterized
R-0 T-0 T-2 CauseOf Effects,mutation
R-1 T-0 T-3 ThemeOf Effects,SHP-2 phosphatase
R-2 T-1 T-2 CauseOf gain-of-function,mutation
R-3 T-1 T-3 ThemeOf gain-of-function,SHP-2 phosphatase
R-4 T-2 T-3 ThemeOf mutation,SHP-2 phosphatase
R-5 T-4 T-5 ThemeOf Mutations,SHP-2 phosphatase
R-6 T-4 T-6 CauseOf Mutations,cause
R-7 T-4 T-7 CauseOf Mutations,hyperactivation
R-8 T-4 T-9 CauseOf Mutations,identified
R-9 T-4 T-12 CauseOf Mutations,characterized
R-11 T-5 T-10 A SHP-2 phosphatase,leukemias
R-12 T-5 T-11 A SHP-2 phosphatase,juvenile myelomonocytic leukemia
R-13 T-6 T-8 ThemeOf cause,catalytic activity
R-14 T-6 T-10 ThemeOf cause,leukemias
R-15 T-6 T-11 ThemeOf cause,juvenile myelomonocytic leukemia
R-16 T-7 T-8 ThemeOf hyperactivation,catalytic activity
R-17 T-7 T-9 ThemeOf hyperactivation,identified
R-18 T-7 T-10 ThemeOf hyperactivation,leukemias
R-19 T-7 T-11 ThemeOf hyperactivation,juvenile myelomonocytic leukemia
R-20 T-8 T-9 ThemeOf catalytic activity,identified
R-21 T-8 T-12 ThemeOf catalytic activity,characterized
R-23 T-9 T-10 ThemeOf identified,leukemias
R-24 T-9 T-11 ThemeOf identified,juvenile myelomonocytic leukemia
R-25 T-9 T-12 ThemeOf identified,characterized
R-26 T-10 T-12 ThemeOf leukemias,characterized
R-28 T-11 T-12 ThemeOf juvenile myelomonocytic leukemia,characterized

sentences

Id Subject Object Predicate Lexical cue
T1 0-107 Sentence denotes Effects of a leukemia-associated gain-of-function mutation of SHP-2 phosphatase on interleukin-3 signaling.

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 150-165 HP_0000752 denotes hyperactivation
T2 222-231 HP_0001909 denotes leukemias
T3 246-278 HP_0012209 denotes juvenile myelomonocytic leukemia
T4 270-278 HP_0001909 denotes leukemia

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
16371368-0#62#67#gene5781 62-67 gene5781 denotes SHP-2
16371368-0#13#21#diseaseC0023418 13-21 diseaseC0023418 denotes leukemia
16371368-1#138#170#diseaseC0349639 246-278 diseaseC0349639 denotes juvenile myelomonocytic leukemia
62#67#gene578113#21#diseaseC0023418 16371368-0#62#67#gene5781 16371368-0#13#21#diseaseC0023418 associated_with SHP-2,leukemia

kaiyin_test

Id Subject Object Predicate Lexical cue
T1 108-117 Var denotes Mutations
T2 121-126 Gene denotes SHP-2
T3 127-138 Enzyme denotes phosphatase
T4 150-165 PosReg denotes hyperactivation
T5 173-191 MPA denotes catalytic activity
T33 216-231 Disease denotes human leukemias
T34 246-278 Disease denotes juvenile myelomonocytic leukemia
R1 T3 T2 ThemeOf phosphatase,SHP-2
R2 T2 T1 ThemeOf SHP-2,Mutations
R3 T1 T4 CauseOf Mutations,hyperactivation
R4 T5 T4 ThemeOf catalytic activity,hyperactivation

name_no

Id Subject Object Predicate Lexical cue
T1 108-117 Var denotes Mutations
T2 121-126 Gene denotes SHP-2
T3 127-138 Enzyme denotes phosphatase
T4 150-165 PosReg denotes hyperactivation
T5 173-191 MPA denotes catalytic activity
T33 216-231 Disease denotes human leukemias
T34 246-278 Disease denotes juvenile myelomonocytic leukemia
R1 T3 T2 ThemeOf phosphatase,SHP-2
R2 T2 T1 ThemeOf SHP-2,Mutations
R3 T1 T4 CauseOf Mutations,hyperactivation
R4 T5 T4 ThemeOf catalytic activity,hyperactivation

DisGeNET

Id Subject Object Predicate Lexical cue
T0 62-67 gene:5781 denotes SHP-2
T1 13-21 disease:C0023418 denotes leukemia
R1 T0 T1 associated_with SHP-2,leukemia

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 13-21 Disease denotes leukemia http://purl.obolibrary.org/obo/MONDO_0005059
T2 222-231 Disease denotes leukemias http://purl.obolibrary.org/obo/MONDO_0005059
T3 246-278 Disease denotes juvenile myelomonocytic leukemia http://purl.obolibrary.org/obo/MONDO_0011908

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 13-21 Phenotype denotes leukemia HP:0001909
T2 246-278 Phenotype denotes juvenile myelomonocytic leukemia HP:0012209

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 216-221 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 246-254 Body_part denotes juvenile http://purl.obolibrary.org/obo/UBERON_0007021