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PubMed:16301764 JSON TXT

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LitCoin-PubTator-for-Tuning

Id	Subject	Object	Predicate	Lexical cue	tao:has_database_id
12	95-103	OrganismTaxon	denotes	patients	Tax:9606
13	258-266	OrganismTaxon	denotes	patients	Tax:9606
14	351-368	DiseaseOrPhenotypicFeature	denotes	diabetes mellitus	MESH:D003920
15	370-402	DiseaseOrPhenotypicFeature	denotes	prostate carcinoma and haematoma	MESH:D011472
16	428-435	OrganismTaxon	denotes	patient	Tax:9606
17	441-454	DiseaseOrPhenotypicFeature	denotes	haemophilia A	MESH:D006467
18	472-480	OrganismTaxon	denotes	patients	Tax:9606
19	535-558	DiseaseOrPhenotypicFeature	denotes	vertebral osteomyelitis	MESH:D010019
20	582-594	DiseaseOrPhenotypicFeature	denotes	tuberculosis	MESH:D014376
21	633-668	DiseaseOrPhenotypicFeature	denotes	colitis and urinary tract infection	MESH:D014552
22	725-732	OrganismTaxon	denotes	patient	Tax:9606
23	909-921	DiseaseOrPhenotypicFeature	denotes	tuberculosis	MESH:D014376

LitCoin-Disease-Tuning-1

Id	Subject	Object	Predicate	Lexical cue	ID:
T1	0-13	DiseaseOrPhenotypicFeature	denotes	Psoas abscess	D016659
T2	111-124	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T3	281-294	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T4	351-368	DiseaseOrPhenotypicFeature	denotes	diabetes mellitus	D003920
T5	379-388	DiseaseOrPhenotypicFeature	denotes	carcinoma	D002277
T6	441-452	DiseaseOrPhenotypicFeature	denotes	haemophilia	D006467
T7	497-510	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T8	545-558	DiseaseOrPhenotypicFeature	denotes	osteomyelitis	D010019
T9	582-594	DiseaseOrPhenotypicFeature	denotes	tuberculosis	D014376
T10	633-640	DiseaseOrPhenotypicFeature	denotes	colitis	D003092
T11	645-668	DiseaseOrPhenotypicFeature	denotes	urinary tract infection	D014552
T12	740-753	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T13	769-776	DiseaseOrPhenotypicFeature	denotes	disease	D004194
T14	852-865	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T15	909-921	DiseaseOrPhenotypicFeature	denotes	tuberculosis	D014376
T16	943-950	DiseaseOrPhenotypicFeature	denotes	disease	D004194

LitEisuke

Id	Subject	Object	Predicate	Lexical cue	#label
T1	0-13	DiseaseOrPhenotypicFeature	denotes	Psoas abscess	D016659
T2	111-124	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T3	281-294	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T4	351-368	DiseaseOrPhenotypicFeature	denotes	diabetes mellitus	D003920
T5	379-388	DiseaseOrPhenotypicFeature	denotes	carcinoma	D002277
T6	441-452	DiseaseOrPhenotypicFeature	denotes	haemophilia	D006467
T7	497-510	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T8	545-558	DiseaseOrPhenotypicFeature	denotes	osteomyelitis	D010019
T9	582-594	DiseaseOrPhenotypicFeature	denotes	tuberculosis	D014376
T10	633-640	DiseaseOrPhenotypicFeature	denotes	colitis	D003092
T11	645-668	DiseaseOrPhenotypicFeature	denotes	urinary tract infection	D014552
T12	740-753	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T13	852-865	DiseaseOrPhenotypicFeature	denotes	psoas abscess	D016659
T14	909-921	DiseaseOrPhenotypicFeature	denotes	tuberculosis	D014376

sentences

Id	Subject	Object	Predicate	Lexical cue
TextSentencer_T1	0-63	Sentence	denotes	Psoas abscess: report of a series and review of the literature.
TextSentencer_T2	64-227	Sentence	denotes	We describe a series of twelve patients with a psoas abscess seen in a three-year period in a university hospital and a large teaching hospital in the Netherlands.
TextSentencer_T3	228-295	Sentence	denotes	In our series, five of the 12 patients had a primary psoas abscess.
TextSentencer_T4	296-455	Sentence	denotes	The predisposing conditions were intravenous drug use, diabetes mellitus, prostate carcinoma and haematoma in the psoas muscle in a patient with haemophilia A.
TextSentencer_T5	456-511	Sentence	denotes	Seven of the 12 patients had a secondary psoas abscess.
TextSentencer_T6	512-595	Sentence	denotes	Five cases were due to vertebral osteomyelitis including two cases of tuberculosis.
TextSentencer_T7	596-669	Sentence	denotes	In the other two cases it was due to colitis and urinary tract infection.
TextSentencer_T8	670-884	Sentence	denotes	It is remarkable that in our series there was only one patient with a psoas abscess secondary to a disease of the digestive tract, while this is the most common cause of a secondary psoas abscess in the literature.
TextSentencer_T9	885-957	Sentence	denotes	There were two cases of tuberculosis which is an emerging disease again.
T1	0-63	Sentence	denotes	Psoas abscess: report of a series and review of the literature.
T2	64-227	Sentence	denotes	We describe a series of twelve patients with a psoas abscess seen in a three-year period in a university hospital and a large teaching hospital in the Netherlands.
T3	228-295	Sentence	denotes	In our series, five of the 12 patients had a primary psoas abscess.
T4	296-455	Sentence	denotes	The predisposing conditions were intravenous drug use, diabetes mellitus, prostate carcinoma and haematoma in the psoas muscle in a patient with haemophilia A.
T5	456-511	Sentence	denotes	Seven of the 12 patients had a secondary psoas abscess.
T6	512-595	Sentence	denotes	Five cases were due to vertebral osteomyelitis including two cases of tuberculosis.
T7	596-669	Sentence	denotes	In the other two cases it was due to colitis and urinary tract infection.
T8	670-884	Sentence	denotes	It is remarkable that in our series there was only one patient with a psoas abscess secondary to a disease of the digestive tract, while this is the most common cause of a secondary psoas abscess in the literature.
T9	885-957	Sentence	denotes	There were two cases of tuberculosis which is an emerging disease again.

PubmedHPO

Id	Subject	Object	Predicate	Lexical cue
T1	351-368	HP_0000819	denotes	diabetes mellitus
T2	645-668	HP_0000010	denotes	urinary tract infection

PubCasesHPO

Id	Subject	Object	Predicate	Lexical cue
AB1	351-368	HP:0000819	denotes	diabetes mellitus
AB2	379-388	HP:0030731	denotes	carcinoma
AB3	545-558	HP:0002754	denotes	osteomyelitis
AB4	633-640	HP:0002583	denotes	colitis

PubCasesORDO

Id	Subject	Object	Predicate	Lexical cue
AB1	582-594	ORDO:3389	denotes	tuberculosis
AB2	909-921	ORDO:3389	denotes	tuberculosis

performance-test

Id	Subject	Object	Predicate	Lexical cue
PD-UBERON-AE-B_T1	535-544	http://purl.obolibrary.org/obo/UBERON_3010224	denotes	vertebral
PD-UBERON-AE-B_T2	535-544	http://purl.obolibrary.org/obo/UBERON_0002412	denotes	vertebral
PD-UBERON-AE-B_T3	410-422	http://purl.obolibrary.org/obo/UBERON_0008450	denotes	psoas muscle
PD-UBERON-AE-B_T4	784-799	http://purl.obolibrary.org/obo/UBERON_0001555	denotes	digestive tract