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PubMed:16288197
Annnotations
PubTator4TogoVar
Id | Subject | Object | Predicate | Lexical cue | proteinmutation |
---|---|---|---|---|---|
16288197_0 | 1457-1461 | ProteinMutation | denotes | Q48H | rs74315339 |
16288197_1 | 2294-2298 | ProteinMutation | denotes | Q48H | rs74315339 |
16288197_2 | 2611-2615 | ProteinMutation | denotes | Q48H | rs74315339 |
LitCoin-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-89 | Sentence | denotes | Genetic homogeneity for inherited congenital microcoria loci in an Asian Indian pedigree. |
T2 | 90-98 | Sentence | denotes | PURPOSE: |
T3 | 99-241 | Sentence | denotes | Congenital microcoria is a rare autosomal dominant developmental disorder of the iris associated with myopia and juvenile open angle glaucoma. |
T4 | 242-339 | Sentence | denotes | Linkage to the chromosomal locus 13q31-q32 has previously been reported in a large French family. |
T5 | 340-562 | Sentence | denotes | In the current study, a three generation Asian Indian family with 15 congenital microcoria (pupils with a diameter <2 mm) affected members was studied for linkage to candidate microsatellite markers at the 13q31-q32 locus. |
T6 | 563-571 | Sentence | denotes | METHODS: |
T7 | 572-661 | Sentence | denotes | Twenty-four members of the family were clinically examined and genomic DNA was extracted. |
T8 | 662-803 | Sentence | denotes | Microsatellite markers at 13q31-q32 were PCR amplified and run on an ABI Prism 310 genetic analyzer and genotyped with the GeneScan analysis. |
T9 | 804-900 | Sentence | denotes | Two point and multipoint linkage analyses were performed using the MLINK and SUPERLINK programs. |
T10 | 901-909 | Sentence | denotes | RESULTS: |
T11 | 910-1032 | Sentence | denotes | Peak two point LOD scores of 3.5, 4.7, and 5.3 were found co-incident with consecutive markers D13S154, DCT, and D13S1280. |
T12 | 1033-1241 | Sentence | denotes | Multipoint analysis revealed a 4 cM region encompassing D13S1300 to D13S1280 where the LOD remains just over 6.0 Thus we confirm localization of the congenital microcoria locus to chromosomal locus 13q31-q32. |
T13 | 1242-1390 | Sentence | denotes | In addition, eight individuals who had both microcoria and glaucoma were screened for glaucoma genes: myocilin (MYOC), optineurin (OPTN) and CYP1B1. |
T14 | 1391-1619 | Sentence | denotes | Using direct sequencing a point mutation (144 G>A) resulting in a Q48H substitution in exon 1 of the MYOC gene was observed in five of the eight glaucoma patients, but not in unaffected family members and 100 unrelated controls. |
T15 | 1620-1632 | Sentence | denotes | CONCLUSIONS: |
T16 | 1633-1861 | Sentence | denotes | We have confirmed the localization of the congenital microcoria locus (MCOR) to 13q31-q32 in a large Asian Indian family and conclude that current information suggests this is a single locus disorder and genetically homogeneous. |
T17 | 1862-2005 | Sentence | denotes | When combined with the initial linkage paper our haplotype and linkage data map the MCOR locus to a 6-7 cM region between D13S265 and D13S1280. |
T18 | 2006-2105 | Sentence | denotes | The DCT locus, a member of the tyrosinase family involved in pigmentation, maps within this region. |
T19 | 2106-2372 | Sentence | denotes | Data presented here supports the hypothesis that congenital microcoria is a potential risk factor for glaucoma, although this observation is complicated by the partial segregation of MYOC Q48H (1q24.3-q25.2), a mutation known to be associated with glaucoma in India. |
T20 | 2373-2550 | Sentence | denotes | Fine mapping and candidate gene analysis continues with the hope that characterizing the micocoria gene will lead to a better understanding of microcoria and glaucoma causation. |
T21 | 2551-2653 | Sentence | denotes | The relationship between microcoria, glaucoma, and the MYOC Q48H mutation in this family is discussed. |
LitCoin-entities-OrganismTaxon-PD
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 180-184 | OrganismTaxon | denotes | iris | NCBItxid:444649|NCBItxid:26378 |
T3 | 232-240 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
T4 | 1301-1309 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
T5 | 1328-1336 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
T6 | 1536-1544 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
T7 | 2208-2216 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
T8 | 2354-2362 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
T9 | 2531-2539 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
T10 | 2588-2596 | OrganismTaxon | denotes | glaucoma | NCBItxid:5882 |
LitCoin-entities
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
2504 | 34-55 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | MESH:C537550 |
2505 | 99-120 | DiseaseOrPhenotypicFeature | denotes | Congenital microcoria | MESH:C537550 |
2506 | 131-184 | DiseaseOrPhenotypicFeature | denotes | autosomal dominant developmental disorder of the iris | MESH:D007499 |
2507 | 201-207 | DiseaseOrPhenotypicFeature | denotes | myopia | MESH:D009216 |
2508 | 212-240 | DiseaseOrPhenotypicFeature | denotes | juvenile open angle glaucoma | MESH:D005902 |
2509 | 409-430 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | MESH:C537550 |
2510 | 1014-1017 | GeneOrGeneProduct | denotes | DCT | NCBIGene:1638 |
2511 | 1182-1203 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | MESH:C537550 |
2512 | 1286-1296 | DiseaseOrPhenotypicFeature | denotes | microcoria | MESH:C537550 |
2513 | 1301-1309 | DiseaseOrPhenotypicFeature | denotes | glaucoma | MESH:D005901 |
2514 | 1328-1336 | DiseaseOrPhenotypicFeature | denotes | glaucoma | MESH:D005901 |
2515 | 1344-1352 | GeneOrGeneProduct | denotes | myocilin | NCBIGene:4653 |
2516 | 1354-1358 | GeneOrGeneProduct | denotes | MYOC | NCBIGene:4653 |
2517 | 1361-1371 | GeneOrGeneProduct | denotes | optineurin | NCBIGene:10133 |
2518 | 1373-1377 | GeneOrGeneProduct | denotes | OPTN | NCBIGene:10133 |
2519 | 1383-1389 | GeneOrGeneProduct | denotes | CYP1B1 | NCBIGene:1545 |
2520 | 1433-1440 | SequenceVariant | denotes | 144 G>A | DBSNP:rs74315339 |
2521 | 1457-1461 | SequenceVariant | denotes | Q48H | DBSNP:rs74315339 |
2522 | 1492-1496 | GeneOrGeneProduct | denotes | MYOC | NCBIGene:4653 |
2523 | 1536-1544 | DiseaseOrPhenotypicFeature | denotes | glaucoma | MESH:D005901 |
2524 | 1545-1553 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
2525 | 1675-1696 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | MESH:C537550 |
2526 | 1704-1708 | GeneOrGeneProduct | denotes | MCOR | NCBIGene:8104 |
2527 | 1946-1950 | GeneOrGeneProduct | denotes | MCOR | NCBIGene:8104 |
2528 | 2010-2013 | GeneOrGeneProduct | denotes | DCT | NCBIGene:1638 |
2529 | 2037-2047 | GeneOrGeneProduct | denotes | tyrosinase | NCBIGene:7299 |
2530 | 2067-2079 | DiseaseOrPhenotypicFeature | denotes | pigmentation | MESH:D010859 |
2531 | 2155-2176 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | MESH:C537550 |
2532 | 2208-2216 | DiseaseOrPhenotypicFeature | denotes | glaucoma | MESH:D005901 |
2533 | 2289-2293 | GeneOrGeneProduct | denotes | MYOC | NCBIGene:4653 |
2534 | 2294-2298 | SequenceVariant | denotes | Q48H | DBSNP:rs74315339 |
2535 | 2354-2362 | DiseaseOrPhenotypicFeature | denotes | glaucoma | MESH:D005901 |
2536 | 2462-2471 | GeneOrGeneProduct | denotes | micocoria | NCBIGene:8104 |
2537 | 2516-2526 | DiseaseOrPhenotypicFeature | denotes | microcoria | MESH:C537550 |
2538 | 2531-2539 | DiseaseOrPhenotypicFeature | denotes | glaucoma | MESH:D005901 |
2539 | 2576-2586 | DiseaseOrPhenotypicFeature | denotes | microcoria | MESH:C537550 |
2540 | 2588-2596 | DiseaseOrPhenotypicFeature | denotes | glaucoma | MESH:D005901 |
2541 | 2606-2610 | GeneOrGeneProduct | denotes | MYOC | NCBIGene:4653 |
2542 | 2611-2615 | SequenceVariant | denotes | Q48H | DBSNP:rs74315339 |
LitCoin_Mondo
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 24-33 | DiseaseOrPhenotypicFeature | denotes | inherited | 0021152 |
T2 | 34-55 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T3 | 34-44 | DiseaseOrPhenotypicFeature | denotes | congenital | 0021140 |
T4 | 99-120 | DiseaseOrPhenotypicFeature | denotes | Congenital microcoria | 0007989 |
T5 | 126-130 | DiseaseOrPhenotypicFeature | denotes | rare | 0021136 |
T6 | 201-207 | DiseaseOrPhenotypicFeature | denotes | myopia | 0001384 |
T7 | 212-240 | DiseaseOrPhenotypicFeature | denotes | juvenile open angle glaucoma | 0020367 |
T8 | 232-240 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T9 | 409-430 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T10 | 409-419 | DiseaseOrPhenotypicFeature | denotes | congenital | 0021140 |
T11 | 1182-1203 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T12 | 1182-1192 | DiseaseOrPhenotypicFeature | denotes | congenital | 0021140 |
T13 | 1301-1309 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T14 | 1328-1336 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T15 | 1536-1544 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T16 | 1675-1696 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T17 | 1675-1685 | DiseaseOrPhenotypicFeature | denotes | congenital | 0021140 |
T18 | 2155-2176 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T19 | 2155-2165 | DiseaseOrPhenotypicFeature | denotes | congenital | 0021140 |
T20 | 2208-2216 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T21 | 2354-2362 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T22 | 2531-2539 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T23 | 2588-2596 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
LitCoin-SeqVar
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1457-1461 | SequenceVariant | denotes | Q48H |
T2 | 2294-2298 | SequenceVariant | denotes | Q48H |
T3 | 2611-2615 | SequenceVariant | denotes | Q48H |
LitCoin-GeneOrGeneProduct-v0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 126-130 | GeneOrGeneProduct | denotes | rare |
T2 | 180-184 | GeneOrGeneProduct | denotes | iris |
T3 | 212-220 | GeneOrGeneProduct | denotes | juvenile |
T4 | 221-225 | GeneOrGeneProduct | denotes | open |
T5 | 226-231 | GeneOrGeneProduct | denotes | angle |
T6 | 314-318 | GeneOrGeneProduct | denotes | in a |
T7 | 319-324 | GeneOrGeneProduct | denotes | large |
T8 | 563-570 | GeneOrGeneProduct | denotes | METHODS |
T9 | 572-583 | GeneOrGeneProduct | denotes | Twenty-four |
T10 | 735-740 | GeneOrGeneProduct | denotes | Prism |
T11 | 808-813 | GeneOrGeneProduct | denotes | point |
T12 | 919-924 | GeneOrGeneProduct | denotes | point |
T13 | 1344-1352 | GeneOrGeneProduct | denotes | myocilin |
T14 | 1354-1358 | GeneOrGeneProduct | denotes | MYOC |
T15 | 1361-1371 | GeneOrGeneProduct | denotes | optineurin |
T16 | 1373-1377 | GeneOrGeneProduct | denotes | OPTN |
T17 | 1383-1389 | GeneOrGeneProduct | denotes | CYP1B1 |
T18 | 1417-1422 | GeneOrGeneProduct | denotes | point |
T19 | 1423-1431 | GeneOrGeneProduct | denotes | mutation |
T20 | 1452-1456 | GeneOrGeneProduct | denotes | in a |
T21 | 1492-1496 | GeneOrGeneProduct | denotes | MYOC |
T22 | 1704-1708 | GeneOrGeneProduct | denotes | MCOR |
T23 | 1723-1727 | GeneOrGeneProduct | denotes | in a |
T24 | 1728-1733 | GeneOrGeneProduct | denotes | large |
T25 | 1885-1892 | GeneOrGeneProduct | denotes | initial |
T26 | 1946-1950 | GeneOrGeneProduct | denotes | MCOR |
T27 | 2037-2047 | GeneOrGeneProduct | denotes | tyrosinase |
T28 | 2081-2085 | GeneOrGeneProduct | denotes | maps |
T29 | 2197-2203 | GeneOrGeneProduct | denotes | factor |
T30 | 2289-2293 | GeneOrGeneProduct | denotes | MYOC |
T31 | 2317-2325 | GeneOrGeneProduct | denotes | mutation |
T32 | 2433-2437 | GeneOrGeneProduct | denotes | hope |
T33 | 2606-2610 | GeneOrGeneProduct | denotes | MYOC |
T34 | 2616-2624 | GeneOrGeneProduct | denotes | mutation |
LitCoin-GeneOrGeneProduct-v2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 126-130 | GeneOrGeneProduct | denotes | rare |
T2 | 180-184 | GeneOrGeneProduct | denotes | iris |
T3 | 212-220 | GeneOrGeneProduct | denotes | juvenile |
T4 | 319-324 | GeneOrGeneProduct | denotes | large |
T5 | 572-583 | GeneOrGeneProduct | denotes | Twenty-four |
T6 | 1344-1352 | GeneOrGeneProduct | denotes | myocilin |
T7 | 1354-1358 | GeneOrGeneProduct | denotes | MYOC |
T8 | 1361-1371 | GeneOrGeneProduct | denotes | optineurin |
T9 | 1373-1377 | GeneOrGeneProduct | denotes | OPTN |
T10 | 1383-1389 | GeneOrGeneProduct | denotes | CYP1B1 |
T11 | 1492-1496 | GeneOrGeneProduct | denotes | MYOC |
T12 | 1704-1708 | GeneOrGeneProduct | denotes | MCOR |
T13 | 1728-1733 | GeneOrGeneProduct | denotes | large |
T14 | 1946-1950 | GeneOrGeneProduct | denotes | MCOR |
T15 | 2037-2047 | GeneOrGeneProduct | denotes | tyrosinase |
T16 | 2197-2203 | GeneOrGeneProduct | denotes | factor |
T17 | 2289-2293 | GeneOrGeneProduct | denotes | MYOC |
T18 | 2606-2610 | GeneOrGeneProduct | denotes | MYOC |
LitCoin-Disease-MeSH
Id | Subject | Object | Predicate | Lexical cue | originalLabel |
---|---|---|---|---|---|
T1 | 34-55 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T2 | 99-120 | DiseaseOrPhenotypicFeature | denotes | Congenital microcoria | C537550 |
T3 | 201-207 | DiseaseOrPhenotypicFeature | denotes | myopia | D009216 |
T4 | 221-240 | DiseaseOrPhenotypicFeature | denotes | open angle glaucoma | D005902 |
T5 | 409-430 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T6 | 1182-1203 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T7 | 1301-1309 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T8 | 1328-1336 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T9 | 1536-1544 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T10 | 1675-1696 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T11 | 2155-2176 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T12 | 2208-2216 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T13 | 2354-2362 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T14 | 2531-2539 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T15 | 2588-2596 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
LitCoin-GeneOrGeneProduct-v3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 212-220 | GeneOrGeneProduct | denotes | juvenile |
T2 | 1344-1352 | GeneOrGeneProduct | denotes | myocilin |
T3 | 1354-1358 | GeneOrGeneProduct | denotes | MYOC |
T4 | 1361-1371 | GeneOrGeneProduct | denotes | optineurin |
T5 | 1373-1377 | GeneOrGeneProduct | denotes | OPTN |
T6 | 1383-1389 | GeneOrGeneProduct | denotes | CYP1B1 |
T7 | 1492-1496 | GeneOrGeneProduct | denotes | MYOC |
T8 | 1704-1708 | GeneOrGeneProduct | denotes | MCOR |
T9 | 1946-1950 | GeneOrGeneProduct | denotes | MCOR |
T10 | 2037-2047 | GeneOrGeneProduct | denotes | tyrosinase |
T11 | 2289-2293 | GeneOrGeneProduct | denotes | MYOC |
T12 | 2606-2610 | GeneOrGeneProduct | denotes | MYOC |
LitCoin_Mondo_095
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 34-55 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T2 | 99-120 | DiseaseOrPhenotypicFeature | denotes | Congenital microcoria | 0007989 |
T3 | 201-207 | DiseaseOrPhenotypicFeature | denotes | myopia | 0001384 |
T4 | 212-240 | DiseaseOrPhenotypicFeature | denotes | juvenile open angle glaucoma | 0020367 |
T5 | 409-430 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T6 | 1182-1203 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T7 | 1301-1309 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T8 | 1328-1336 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T9 | 1536-1544 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T10 | 1675-1696 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T11 | 2155-2176 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | 0007989 |
T12 | 2208-2216 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T13 | 2354-2362 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T14 | 2531-2539 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
T15 | 2588-2596 | DiseaseOrPhenotypicFeature | denotes | glaucoma | 0005041 |
LitCoin-MeSH-Disease-2
Id | Subject | Object | Predicate | Lexical cue | ID: |
---|---|---|---|---|---|
T1 | 34-55 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T2 | 99-120 | DiseaseOrPhenotypicFeature | denotes | Congenital microcoria | C537550 |
T3 | 201-207 | DiseaseOrPhenotypicFeature | denotes | myopia | D009216 |
T4 | 221-240 | DiseaseOrPhenotypicFeature | denotes | open angle glaucoma | D005902 |
T5 | 409-430 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T6 | 1182-1203 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T7 | 1286-1296 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE |
T8 | 1301-1309 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T9 | 1328-1336 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T10 | 1536-1544 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T11 | 1675-1696 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T12 | 2067-2079 | DiseaseOrPhenotypicFeature | denotes | pigmentation | DISEASE |
T13 | 2155-2176 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T14 | 2208-2216 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T15 | 2354-2362 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T16 | 2516-2526 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE |
T17 | 2531-2539 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T18 | 2576-2586 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE |
T19 | 2588-2596 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
LitCoin-MONDO_bioort2019
Id | Subject | Object | Predicate | Lexical cue | #label |
---|---|---|---|---|---|
T1 | 34-55 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T2 | 99-120 | DiseaseOrPhenotypicFeature | denotes | Congenital microcoria | C537550 |
T3 | 201-207 | DiseaseOrPhenotypicFeature | denotes | myopia | D009216 |
T4 | 221-240 | DiseaseOrPhenotypicFeature | denotes | open angle glaucoma | D005902 |
T5 | 409-430 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T6 | 1182-1203 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T7 | 1286-1296 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE |
T8 | 1301-1309 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T9 | 1328-1336 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T10 | 1536-1544 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T11 | 1675-1696 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T12 | 2067-2079 | DiseaseOrPhenotypicFeature | denotes | pigmentation | DISEASE |
T13 | 2155-2176 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 |
T14 | 2208-2216 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T15 | 2354-2362 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T16 | 2516-2526 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE |
T17 | 2531-2539 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
T18 | 2576-2586 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE |
T19 | 2588-2596 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 |
LitCoin-NCBITaxon-2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 180-184 | OrganismTaxon | denotes | iris |
T2 | 1545-1553 | OrganismTaxon | denotes | patients |
LitCoin-Chemical-MeSH-CHEBI
Id | Subject | Object | Predicate | Lexical cue | ID: |
---|---|---|---|---|---|
T1 | 2037-2047 | ChemicalEntity | denotes | tyrosinase | D014442 |
T2 | 2482-2486 | ChemicalEntity | denotes | lead | D007854 |
LitCoin-training-merged
Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
---|---|---|---|---|---|---|
T2 | 2482-2486 | ChemicalEntity | denotes | lead | D007854 | |
T1 | 2037-2047 | ChemicalEntity | denotes | tyrosinase | D014442 | |
T12 | 2606-2610 | GeneOrGeneProduct | denotes | MYOC | ||
T11 | 2289-2293 | GeneOrGeneProduct | denotes | MYOC | ||
T10 | 2037-2047 | GeneOrGeneProduct | denotes | tyrosinase | ||
T9 | 1946-1950 | GeneOrGeneProduct | denotes | MCOR | ||
T8 | 1704-1708 | GeneOrGeneProduct | denotes | MCOR | ||
T7 | 1492-1496 | GeneOrGeneProduct | denotes | MYOC | ||
T6 | 1383-1389 | GeneOrGeneProduct | denotes | CYP1B1 | ||
T5 | 1373-1377 | GeneOrGeneProduct | denotes | OPTN | ||
T4 | 1361-1371 | GeneOrGeneProduct | denotes | optineurin | ||
T3 | 1354-1358 | GeneOrGeneProduct | denotes | MYOC | ||
T73887 | 1344-1352 | GeneOrGeneProduct | denotes | myocilin | ||
T89176 | 212-220 | GeneOrGeneProduct | denotes | juvenile | ||
T19 | 2588-2596 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 | |
T18 | 2576-2586 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE | |
T17 | 2531-2539 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 | |
T16 | 2516-2526 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE | |
T15 | 2354-2362 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 | |
T14 | 2208-2216 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 | |
T13 | 2155-2176 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 | |
T3039 | 2067-2079 | DiseaseOrPhenotypicFeature | denotes | pigmentation | DISEASE | |
T51072 | 1675-1696 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 | |
T85454 | 1536-1544 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 | |
T90156 | 1328-1336 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 | |
T7748 | 1301-1309 | DiseaseOrPhenotypicFeature | denotes | glaucoma | D005901 | |
T56881 | 1286-1296 | DiseaseOrPhenotypicFeature | denotes | microcoria | DISEASE | |
T76489 | 1182-1203 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 | |
T99309 | 409-430 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 | |
T16291 | 221-240 | DiseaseOrPhenotypicFeature | denotes | open angle glaucoma | D005902 | |
T1006 | 201-207 | DiseaseOrPhenotypicFeature | denotes | myopia | D009216 | |
T88181 | 99-120 | DiseaseOrPhenotypicFeature | denotes | Congenital microcoria | C537550 | |
T76097 | 34-55 | DiseaseOrPhenotypicFeature | denotes | congenital microcoria | C537550 | |
T64874 | 1545-1553 | OrganismTaxon | denotes | patients | ||
T17575 | 180-184 | OrganismTaxon | denotes | iris | ||
T56255 | 2611-2615 | SequenceVariant | denotes | Q48H | ||
T90869 | 2294-2298 | SequenceVariant | denotes | Q48H | ||
T58359 | 1457-1461 | SequenceVariant | denotes | Q48H |
PubmedHPO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 131-149 | HP_0000006 | denotes | autosomal dominant |
T2 | 164-184 | HP_0000525 | denotes | disorder of the iris |
T3 | 201-207 | HP_0000545 | denotes | myopia |
T4 | 232-240 | HP_0000501 | denotes | glaucoma |
DisGeNET5_gene_disease
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
16288197-14#183#187#gene4653 | 2289-2293 | gene4653 | denotes | MYOC |
16288197-14#248#256#diseaseC0017601 | 2354-2362 | diseaseC0017601 | denotes | glaucoma |
183#187#gene4653248#256#diseaseC0017601 | 16288197-14#183#187#gene4653 | 16288197-14#248#256#diseaseC0017601 | associated_with | MYOC,glaucoma |
tmVarCorpus
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1433-1440 | DNAMutation:c|SUB|G|144|A | denotes | 144 G>A |
T2 | 1457-1461 | ProteinMutation:p|SUB|Q|48|H | denotes | Q48H |
T3 | 2294-2298 | ProteinMutation:p|SUB|Q|48|H | denotes | Q48H |
T4 | 2611-2615 | ProteinMutation:p|SUB|Q|48|H | denotes | Q48H |
DisGeNET
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T0 | 1361-1371 | gene:10133 | denotes | optineurin |
T1 | 1301-1309 | disease:C0017601 | denotes | glaucoma |
T2 | 1373-1377 | gene:10133 | denotes | OPTN |
T3 | 1301-1309 | disease:C0017601 | denotes | glaucoma |
T4 | 1383-1389 | gene:1545 | denotes | CYP1B1 |
T5 | 1301-1309 | disease:C0017601 | denotes | glaucoma |
R1 | T0 | T1 | associated_with | optineurin,glaucoma |
R2 | T2 | T3 | associated_with | OPTN,glaucoma |
R3 | T4 | T5 | associated_with | CYP1B1,glaucoma |