PubMed:16237198
Annnotations
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 123-129 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T2 | 149-160 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
| T3 | 273-279 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T4 | 390-396 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T5 | 422-428 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T6 | 518-524 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T7 | 1271-1277 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T8 | 1401-1407 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T9 | 1546-1552 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T10 | 1594-1600 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 123-129 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T2 | 149-160 | Glycan_Motif | denotes | sialic acid | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T3 | 273-279 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T4 | 390-396 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T5 | 422-428 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T6 | 518-524 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T7 | 1271-1277 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T8 | 1401-1407 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T9 | 1546-1552 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T10 | 1594-1600 | Glycan_Motif | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 123-129 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T2 | 149-160 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
| T3 | 273-279 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T4 | 390-396 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T5 | 422-428 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T6 | 518-524 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T7 | 1271-1277 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T8 | 1401-1407 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T9 | 1546-1552 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
| T10 | 1594-1600 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | Neu5Ac |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-84 | Sentence | denotes | Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase. |
| TextSentencer_T2 | 85-367 | Sentence | denotes | The synthesis of N-acetylneuraminate (Neu5Ac), the main form of sialic acid, proceeds in vertebrates through the condensation of N-acetylmannosamine 6-phosphate and phosphoenolpyruvate to Neu5Ac-9-phosphate, followed by the dephosphorylation of the latter by a specific phosphatase. |
| TextSentencer_T3 | 368-441 | Sentence | denotes | The sequence encoding Neu5Ac-9-phosphate phosphatase (Neu5Ac-9-Pase; E.C. |
| TextSentencer_T4 | 442-486 | Sentence | denotes | 3.1.3.29) has not been determined until now. |
| TextSentencer_T5 | 487-567 | Sentence | denotes | In this work, we have purified Neu5Ac-9-Pase more than 1000-fold from rat liver. |
| TextSentencer_T6 | 568-726 | Sentence | denotes | Its dependency on Mg2+ and the fact that it was inhibited by vanadate and Ca2+ suggested that it belonged to the haloacid dehalogenase family of phosphatases. |
| TextSentencer_T7 | 727-1070 | Sentence | denotes | Trypsin digestion and mass spectrometry analysis of a polypeptide of about 30 kDa that co-eluted with the activity in the last purification step indicated the presence of a protein designated "haloacid dehalogenase-like hydrolase domain containing 4." The human ortholog of this protein is encoded by a 2-exon gene present on chromosome 20p11. |
| TextSentencer_T8 | 1071-1194 | Sentence | denotes | The human protein was overexpressed in Escherichia coli as a fusion protein with a polyHis tag and purified to homogeneity. |
| TextSentencer_T9 | 1195-1324 | Sentence | denotes | The recombinant enzyme displayed a >230-fold higher catalytic efficiency on Neu5Ac-9-phosphate than on its second best substrate. |
| TextSentencer_T10 | 1325-1400 | Sentence | denotes | Its properties were similar to those of the enzyme purified from rat liver. |
| TextSentencer_T11 | 1401-1553 | Sentence | denotes | Neu5Ac inhibited the enzymatic activity by 50% at 15 mM, indicating that no significant inhibition is exerted at physiological concentrations of Neu5Ac. |
| TextSentencer_T12 | 1554-1724 | Sentence | denotes | The identification of the gene encoding Neu5Ac-9-Pase will facilitate studies aimed at testing its potential implication in unexplained forms of glycosylation deficiency. |
| T1 | 0-84 | Sentence | denotes | Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase. |
| T2 | 85-367 | Sentence | denotes | The synthesis of N-acetylneuraminate (Neu5Ac), the main form of sialic acid, proceeds in vertebrates through the condensation of N-acetylmannosamine 6-phosphate and phosphoenolpyruvate to Neu5Ac-9-phosphate, followed by the dephosphorylation of the latter by a specific phosphatase. |
| T3 | 368-486 | Sentence | denotes | The sequence encoding Neu5Ac-9-phosphate phosphatase (Neu5Ac-9-Pase; E.C. 3.1.3.29) has not been determined until now. |
| T4 | 487-567 | Sentence | denotes | In this work, we have purified Neu5Ac-9-Pase more than 1000-fold from rat liver. |
| T5 | 568-726 | Sentence | denotes | Its dependency on Mg2+ and the fact that it was inhibited by vanadate and Ca2+ suggested that it belonged to the haloacid dehalogenase family of phosphatases. |
| T6 | 727-1070 | Sentence | denotes | Trypsin digestion and mass spectrometry analysis of a polypeptide of about 30 kDa that co-eluted with the activity in the last purification step indicated the presence of a protein designated "haloacid dehalogenase-like hydrolase domain containing 4." The human ortholog of this protein is encoded by a 2-exon gene present on chromosome 20p11. |
| T7 | 1071-1194 | Sentence | denotes | The human protein was overexpressed in Escherichia coli as a fusion protein with a polyHis tag and purified to homogeneity. |
| T8 | 1195-1324 | Sentence | denotes | The recombinant enzyme displayed a >230-fold higher catalytic efficiency on Neu5Ac-9-phosphate than on its second best substrate. |
| T9 | 1325-1400 | Sentence | denotes | Its properties were similar to those of the enzyme purified from rat liver. |
| T10 | 1401-1553 | Sentence | denotes | Neu5Ac inhibited the enzymatic activity by 50% at 15 mM, indicating that no significant inhibition is exerted at physiological concentrations of Neu5Ac. |
| T11 | 1554-1724 | Sentence | denotes | The identification of the gene encoding Neu5Ac-9-Pase will facilitate studies aimed at testing its potential implication in unexplained forms of glycosylation deficiency. |
| T1 | 0-84 | Sentence | denotes | Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase. |
| T2 | 85-367 | Sentence | denotes | The synthesis of N-acetylneuraminate (Neu5Ac), the main form of sialic acid, proceeds in vertebrates through the condensation of N-acetylmannosamine 6-phosphate and phosphoenolpyruvate to Neu5Ac-9-phosphate, followed by the dephosphorylation of the latter by a specific phosphatase. |
| T3 | 368-441 | Sentence | denotes | The sequence encoding Neu5Ac-9-phosphate phosphatase (Neu5Ac-9-Pase; E.C. |
| T4 | 442-486 | Sentence | denotes | 3.1.3.29) has not been determined until now. |
| T5 | 487-567 | Sentence | denotes | In this work, we have purified Neu5Ac-9-Pase more than 1000-fold from rat liver. |
| T6 | 568-726 | Sentence | denotes | Its dependency on Mg2+ and the fact that it was inhibited by vanadate and Ca2+ suggested that it belonged to the haloacid dehalogenase family of phosphatases. |
| T7 | 727-1070 | Sentence | denotes | Trypsin digestion and mass spectrometry analysis of a polypeptide of about 30 kDa that co-eluted with the activity in the last purification step indicated the presence of a protein designated "haloacid dehalogenase-like hydrolase domain containing 4." The human ortholog of this protein is encoded by a 2-exon gene present on chromosome 20p11. |
| T8 | 1071-1194 | Sentence | denotes | The human protein was overexpressed in Escherichia coli as a fusion protein with a polyHis tag and purified to homogeneity. |
| T9 | 1195-1324 | Sentence | denotes | The recombinant enzyme displayed a >230-fold higher catalytic efficiency on Neu5Ac-9-phosphate than on its second best substrate. |
| T10 | 1325-1400 | Sentence | denotes | Its properties were similar to those of the enzyme purified from rat liver. |
| T11 | 1401-1553 | Sentence | denotes | Neu5Ac inhibited the enzymatic activity by 50% at 15 mM, indicating that no significant inhibition is exerted at physiological concentrations of Neu5Ac. |
| T12 | 1554-1724 | Sentence | denotes | The identification of the gene encoding Neu5Ac-9-Pase will facilitate studies aimed at testing its potential implication in unexplained forms of glycosylation deficiency. |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 174-185 | http://purl.obolibrary.org/obo/MAT_0000373 | denotes | vertebrates |
| T2 | 561-566 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T3 | 1394-1399 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
GlycoBiology-PACDB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC002,LEC056,LEC062,LEC069,LEC081,LEC111,LEC133,LEC171,LEC177,LEC187,LEC211,LEC242,LEC252,LEC258,LEC259,LEC260,LEC262,LEC369,LEC377,LEC422,LEC442,LEC448,LEC450,LEC451,LEC454,LEC472,LEC492,LEC620 | denotes | Escherichia coli |
| _T2 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC157,LEC407 | denotes | Escherichia coli |
| _T3 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC754 | denotes | Escherichia coli |
| _T4 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC243,LEC640 | denotes | Escherichia coli |
| _T5 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC295,LEC417 | denotes | Escherichia coli |
| _T6 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC487 | denotes | Escherichia coli |
| _T7 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC244,LEC256,LEC354 | denotes | Escherichia coli |
| _T8 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC054,LEC058,LEC073,LEC082,LEC091,LEC103,LEC109,LEC110,LEC123,LEC158,LEC179,LEC198,LEC205,LEC222,LEC223,LEC224,LEC225,LEC232,LEC298,LEC357,LEC378,LEC383,LEC388,LEC389,LEC397,LEC401,LEC410,LEC452 | denotes | Escherichia coli |
| _T9 | 1110-1126 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 | denotes | Escherichia coli |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 40-71 | http://www.uniprot.org/uniprot/Q9NR45 | denotes | N-acetylneuraminate-9-phosphate |
| T2 | 442-450 | http://www.uniprot.org/uniprot/Q8TBE9 | denotes | 3.1.3.29 |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 442-450 | http://www.uniprot.org/uniprot/Q9CPT3 | denotes | 3.1.3.29 |
| T2 | 642-645 | http://www.uniprot.org/uniprot/P00920 | denotes | Ca2 |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 174-185 | http://purl.bioontology.org/ontology/STY/T010 | denotes | vertebrates |
| T2 | 814-816 | http://purl.bioontology.org/ontology/NCBITAXON/13893 | denotes | co |
| T3 | 1110-1121 | http://purl.bioontology.org/ontology/NCBITAXON/561 | denotes | Escherichia |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 72-83 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase |
| T2 | 355-366 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase |
| T3 | 409-420 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatase |
| T4 | 713-725 | http://purl.obolibrary.org/obo/GO_0016791 | denotes | phosphatases |
| T5 | 89-98 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
| T6 | 89-121 | http://purl.obolibrary.org/obo/GO_0006055 | denotes | synthesis of N-acetylneuraminate |
| T7 | 89-121 | http://purl.obolibrary.org/obo/GO_0046380 | denotes | synthesis of N-acetylneuraminate |
| T8 | 309-326 | http://purl.obolibrary.org/obo/GO_0016311 | denotes | dephosphorylation |
| T9 | 735-744 | http://purl.obolibrary.org/obo/GO_0007586 | denotes | digestion |
| T10 | 1699-1712 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1053-1063 | http://purl.obolibrary.org/obo/GO_0005694 | denotes | chromosome |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 174-185 | http://purl.obolibrary.org/obo/UBERON_3010224 | denotes | vertebrates |
| T2 | 561-566 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T3 | 1394-1399 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 171-185 | http://purl.obolibrary.org/obo/MAT_0000374 | denotes | in vertebrates |
| T2 | 174-185 | http://purl.obolibrary.org/obo/MAT_0000373 | denotes | vertebrates |
| T3 | 334-340 | http://purl.obolibrary.org/obo/MAT_0000488 | denotes | latter |
| T4 | 561-566 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T5 | 1394-1399 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
GlyTouCan-IUPAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| GlycanIUPAC_T1 | 123-129 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T2 | 273-279 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T3 | 390-396 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T4 | 422-428 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T5 | 518-524 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T6 | 1271-1277 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T7 | 1401-1407 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T8 | 1546-1552 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T9 | 1594-1600 | "http://rdf.glycoinfo.org/glycan/G76685HR" | denotes | Neu5Ac |
| GlycanIUPAC_T10 | 123-129 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T11 | 273-279 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T12 | 390-396 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T13 | 422-428 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T14 | 518-524 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T15 | 1271-1277 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T16 | 1401-1407 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T17 | 1546-1552 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T18 | 1594-1600 | "http://rdf.glycoinfo.org/glycan/G65881BF" | denotes | Neu5Ac |
| GlycanIUPAC_T19 | 123-129 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T20 | 273-279 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T21 | 390-396 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T22 | 422-428 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T23 | 518-524 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T24 | 1271-1277 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T25 | 1401-1407 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T26 | 1546-1552 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T27 | 1594-1600 | "http://rdf.glycoinfo.org/glycan/G82702MH" | denotes | Neu5Ac |
| GlycanIUPAC_T28 | 123-129 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T29 | 273-279 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T30 | 390-396 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T31 | 422-428 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T32 | 518-524 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T33 | 1271-1277 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T34 | 1401-1407 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T35 | 1546-1552 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T36 | 1594-1600 | "http://rdf.glycoinfo.org/glycan/G51494MY" | denotes | Neu5Ac |
| GlycanIUPAC_T37 | 123-129 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T38 | 273-279 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T39 | 390-396 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T40 | 422-428 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T41 | 518-524 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T42 | 1271-1277 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T43 | 1401-1407 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T44 | 1546-1552 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T45 | 1594-1600 | "http://rdf.glycoinfo.org/glycan/G37109XL" | denotes | Neu5Ac |
| GlycanIUPAC_T46 | 123-129 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T47 | 273-279 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T48 | 390-396 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T49 | 422-428 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T50 | 518-524 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T51 | 1271-1277 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T52 | 1401-1407 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T53 | 1546-1552 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T54 | 1594-1600 | "http://rdf.glycoinfo.org/glycan/G47427MX" | denotes | Neu5Ac |
| GlycanIUPAC_T55 | 123-129 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T56 | 273-279 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T57 | 390-396 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T58 | 422-428 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T59 | 518-524 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T60 | 1271-1277 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T61 | 1401-1407 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T62 | 1546-1552 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
| GlycanIUPAC_T63 | 1594-1600 | "http://rdf.glycoinfo.org/glycan/G89927NS" | denotes | Neu5Ac |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 174-185 | http://purl.obolibrary.org/obo/UBERON_3010224 | denotes | vertebrates |
| PD-UBERON-AE-B_T2 | 561-566 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| PD-UBERON-AE-B_T3 | 1394-1399 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 174-185 | Body_part | denotes | vertebrates | http://purl.obolibrary.org/obo/MAT_0000373 |
| T2 | 561-566 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
| T3 | 1394-1399 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 123-129 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T2 | 273-279 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T3 | 390-396 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T4 | 422-428 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T5 | 518-524 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T6 | 1271-1277 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T7 | 1401-1407 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T8 | 1546-1552 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T9 | 1594-1600 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 557-560 | OrganismTaxon | denotes | rat | 10114|10116 |
| T3 | 983-988 | OrganismTaxon | denotes | human | 9606 |
| T4 | 1075-1080 | OrganismTaxon | denotes | human | 9606 |
| T5 | 1110-1126 | OrganismTaxon | denotes | Escherichia coli | 562 |
| T6 | 1390-1393 | OrganismTaxon | denotes | rat | 10114|10116 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 561-566 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T2 | 1053-1063 | Body_part | denotes | chromosome | http://purl.obolibrary.org/obo/GO_0005694 |
| T3 | 1394-1399 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
GlyCosmos15-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 174-185 | Body_part | denotes | vertebrates | http://purl.obolibrary.org/obo/MAT_0000373 |
| T2 | 561-566 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
| T3 | 1394-1399 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/MAT_0000097 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-84 | Sentence | denotes | Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase. |
| TextSentencer_T2 | 85-367 | Sentence | denotes | The synthesis of N-acetylneuraminate (Neu5Ac), the main form of sialic acid, proceeds in vertebrates through the condensation of N-acetylmannosamine 6-phosphate and phosphoenolpyruvate to Neu5Ac-9-phosphate, followed by the dephosphorylation of the latter by a specific phosphatase. |
| TextSentencer_T3 | 368-441 | Sentence | denotes | The sequence encoding Neu5Ac-9-phosphate phosphatase (Neu5Ac-9-Pase; E.C. |
| TextSentencer_T4 | 442-486 | Sentence | denotes | 3.1.3.29) has not been determined until now. |
| TextSentencer_T5 | 487-567 | Sentence | denotes | In this work, we have purified Neu5Ac-9-Pase more than 1000-fold from rat liver. |
| TextSentencer_T6 | 568-726 | Sentence | denotes | Its dependency on Mg2+ and the fact that it was inhibited by vanadate and Ca2+ suggested that it belonged to the haloacid dehalogenase family of phosphatases. |
| TextSentencer_T7 | 727-1070 | Sentence | denotes | Trypsin digestion and mass spectrometry analysis of a polypeptide of about 30 kDa that co-eluted with the activity in the last purification step indicated the presence of a protein designated "haloacid dehalogenase-like hydrolase domain containing 4." The human ortholog of this protein is encoded by a 2-exon gene present on chromosome 20p11. |
| TextSentencer_T8 | 1071-1194 | Sentence | denotes | The human protein was overexpressed in Escherichia coli as a fusion protein with a polyHis tag and purified to homogeneity. |
| TextSentencer_T9 | 1195-1324 | Sentence | denotes | The recombinant enzyme displayed a >230-fold higher catalytic efficiency on Neu5Ac-9-phosphate than on its second best substrate. |
| TextSentencer_T10 | 1325-1400 | Sentence | denotes | Its properties were similar to those of the enzyme purified from rat liver. |
| TextSentencer_T11 | 1401-1553 | Sentence | denotes | Neu5Ac inhibited the enzymatic activity by 50% at 15 mM, indicating that no significant inhibition is exerted at physiological concentrations of Neu5Ac. |
| TextSentencer_T12 | 1554-1724 | Sentence | denotes | The identification of the gene encoding Neu5Ac-9-Pase will facilitate studies aimed at testing its potential implication in unexplained forms of glycosylation deficiency. |
| T1 | 0-84 | Sentence | denotes | Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase. |
| T2 | 85-367 | Sentence | denotes | The synthesis of N-acetylneuraminate (Neu5Ac), the main form of sialic acid, proceeds in vertebrates through the condensation of N-acetylmannosamine 6-phosphate and phosphoenolpyruvate to Neu5Ac-9-phosphate, followed by the dephosphorylation of the latter by a specific phosphatase. |
| T3 | 368-486 | Sentence | denotes | The sequence encoding Neu5Ac-9-phosphate phosphatase (Neu5Ac-9-Pase; E.C. 3.1.3.29) has not been determined until now. |
| T4 | 487-567 | Sentence | denotes | In this work, we have purified Neu5Ac-9-Pase more than 1000-fold from rat liver. |
| T5 | 568-726 | Sentence | denotes | Its dependency on Mg2+ and the fact that it was inhibited by vanadate and Ca2+ suggested that it belonged to the haloacid dehalogenase family of phosphatases. |
| T6 | 727-1070 | Sentence | denotes | Trypsin digestion and mass spectrometry analysis of a polypeptide of about 30 kDa that co-eluted with the activity in the last purification step indicated the presence of a protein designated "haloacid dehalogenase-like hydrolase domain containing 4." The human ortholog of this protein is encoded by a 2-exon gene present on chromosome 20p11. |
| T7 | 1071-1194 | Sentence | denotes | The human protein was overexpressed in Escherichia coli as a fusion protein with a polyHis tag and purified to homogeneity. |
| T8 | 1195-1324 | Sentence | denotes | The recombinant enzyme displayed a >230-fold higher catalytic efficiency on Neu5Ac-9-phosphate than on its second best substrate. |
| T9 | 1325-1400 | Sentence | denotes | Its properties were similar to those of the enzyme purified from rat liver. |
| T10 | 1401-1553 | Sentence | denotes | Neu5Ac inhibited the enzymatic activity by 50% at 15 mM, indicating that no significant inhibition is exerted at physiological concentrations of Neu5Ac. |
| T11 | 1554-1724 | Sentence | denotes | The identification of the gene encoding Neu5Ac-9-Pase will facilitate studies aimed at testing its potential implication in unexplained forms of glycosylation deficiency. |
| T1 | 0-84 | Sentence | denotes | Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase. |
| T2 | 85-367 | Sentence | denotes | The synthesis of N-acetylneuraminate (Neu5Ac), the main form of sialic acid, proceeds in vertebrates through the condensation of N-acetylmannosamine 6-phosphate and phosphoenolpyruvate to Neu5Ac-9-phosphate, followed by the dephosphorylation of the latter by a specific phosphatase. |
| T3 | 368-441 | Sentence | denotes | The sequence encoding Neu5Ac-9-phosphate phosphatase (Neu5Ac-9-Pase; E.C. |
| T4 | 442-486 | Sentence | denotes | 3.1.3.29) has not been determined until now. |
| T5 | 487-567 | Sentence | denotes | In this work, we have purified Neu5Ac-9-Pase more than 1000-fold from rat liver. |
| T6 | 568-726 | Sentence | denotes | Its dependency on Mg2+ and the fact that it was inhibited by vanadate and Ca2+ suggested that it belonged to the haloacid dehalogenase family of phosphatases. |
| T7 | 727-1070 | Sentence | denotes | Trypsin digestion and mass spectrometry analysis of a polypeptide of about 30 kDa that co-eluted with the activity in the last purification step indicated the presence of a protein designated "haloacid dehalogenase-like hydrolase domain containing 4." The human ortholog of this protein is encoded by a 2-exon gene present on chromosome 20p11. |
| T8 | 1071-1194 | Sentence | denotes | The human protein was overexpressed in Escherichia coli as a fusion protein with a polyHis tag and purified to homogeneity. |
| T9 | 1195-1324 | Sentence | denotes | The recombinant enzyme displayed a >230-fold higher catalytic efficiency on Neu5Ac-9-phosphate than on its second best substrate. |
| T10 | 1325-1400 | Sentence | denotes | Its properties were similar to those of the enzyme purified from rat liver. |
| T11 | 1401-1553 | Sentence | denotes | Neu5Ac inhibited the enzymatic activity by 50% at 15 mM, indicating that no significant inhibition is exerted at physiological concentrations of Neu5Ac. |
| T12 | 1554-1724 | Sentence | denotes | The identification of the gene encoding Neu5Ac-9-Pase will facilitate studies aimed at testing its potential implication in unexplained forms of glycosylation deficiency. |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-84 | Sentence | denotes | Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase. |
| T2 | 85-367 | Sentence | denotes | The synthesis of N-acetylneuraminate (Neu5Ac), the main form of sialic acid, proceeds in vertebrates through the condensation of N-acetylmannosamine 6-phosphate and phosphoenolpyruvate to Neu5Ac-9-phosphate, followed by the dephosphorylation of the latter by a specific phosphatase. |
| T3 | 368-486 | Sentence | denotes | The sequence encoding Neu5Ac-9-phosphate phosphatase (Neu5Ac-9-Pase; E.C. 3.1.3.29) has not been determined until now. |
| T4 | 487-567 | Sentence | denotes | In this work, we have purified Neu5Ac-9-Pase more than 1000-fold from rat liver. |
| T5 | 568-726 | Sentence | denotes | Its dependency on Mg2+ and the fact that it was inhibited by vanadate and Ca2+ suggested that it belonged to the haloacid dehalogenase family of phosphatases. |
| T6 | 727-1070 | Sentence | denotes | Trypsin digestion and mass spectrometry analysis of a polypeptide of about 30 kDa that co-eluted with the activity in the last purification step indicated the presence of a protein designated "haloacid dehalogenase-like hydrolase domain containing 4." The human ortholog of this protein is encoded by a 2-exon gene present on chromosome 20p11. |
| T7 | 1071-1194 | Sentence | denotes | The human protein was overexpressed in Escherichia coli as a fusion protein with a polyHis tag and purified to homogeneity. |
| T8 | 1195-1324 | Sentence | denotes | The recombinant enzyme displayed a >230-fold higher catalytic efficiency on Neu5Ac-9-phosphate than on its second best substrate. |
| T9 | 1325-1400 | Sentence | denotes | Its properties were similar to those of the enzyme purified from rat liver. |
| T10 | 1401-1553 | Sentence | denotes | Neu5Ac inhibited the enzymatic activity by 50% at 15 mM, indicating that no significant inhibition is exerted at physiological concentrations of Neu5Ac. |
| T11 | 1554-1724 | Sentence | denotes | The identification of the gene encoding Neu5Ac-9-Pase will facilitate studies aimed at testing its potential implication in unexplained forms of glycosylation deficiency. |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 123-129 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T2 | 273-279 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T3 | 390-396 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T4 | 422-428 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T5 | 518-524 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T6 | 1271-1277 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T7 | 1401-1407 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T8 | 1546-1552 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
| T9 | 1594-1600 | Glycan | denotes | Neu5Ac | https://api.glycosmos.org/wurcs2image/latest/png/binary/G76685HR |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 557-560 | OrganismTaxon | denotes | rat | 10114|10116 |
| T3 | 983-988 | OrganismTaxon | denotes | human | 9606 |
| T4 | 1075-1080 | OrganismTaxon | denotes | human | 9606 |
| T5 | 1110-1126 | OrganismTaxon | denotes | Escherichia coli | 562 |
| T6 | 1390-1393 | OrganismTaxon | denotes | rat | 10114|10116 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 561-566 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T2 | 1053-1063 | Body_part | denotes | chromosome | http://purl.obolibrary.org/obo/GO_0005694 |
| T3 | 1394-1399 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |