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LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 175-180 OrganismTaxon denotes human NCBItxid:9606

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-136 Sentence denotes Carrier frequency of mutation 657del5 in the NBS1 gene in a population of Polish pediatric patients with sporadic lymphoid malignancies.
T2 137-321 Sentence denotes Nijmegen breakage syndrome (NBS) is a human autosomal recessive disease characterized by genomic instability and enhanced cancer predisposition, in particular to lymphoma and leukemia.
T3 322-557 Sentence denotes Recently, significantly higher frequencies of heterozygous carriers of the Slavic founder NBS1 mutation, 657del5, were found in Russian children with sporadic lymphoid malignancies, and in Polish adults with non-Hodgkin lymphoma (NHL).
T4 558-688 Sentence denotes In addition, the substitution 643C>T (R215W) has also been found in excess among children with acute lymphoblastic leukemia (ALL).
T5 689-873 Sentence denotes In an attempt to asses the contribution of both mutations to the development of sporadic lymphoid malignancies, we analyzed DNA samples from a large group of Polish pediatric patients.
T6 874-1068 Sentence denotes The NBS1 mutation 657del5 on one allele was found in 3 of 270 patients with ALL and 2 of 212 children and adolescents with NHL; no carrier was found among 63 patients with Hodgkin lymphoma (HL).
T7 1069-1137 Sentence denotes No carriers of the variant R215W were detected in any studied group.
T8 1138-1327 Sentence denotes The relative frequency of the 657del5 mutation was calculated from a total of 6,984 controls matched by place of patient residence, of whom 42 were found to be carriers (frequency = 0.006).
T9 1328-1552 Sentence denotes In the analyzed population with malignancies, an increased odds ratio for the occurrence of mutation 657del5 was found in comparison with the control Polish population (OR range 1.48-1.85, 95% confidence interval 1.18-2.65).
T10 1553-1681 Sentence denotes This finding indicates that the frequency of the mutation carriers was indeed increased in patients with ALL and NHL (p < 0.05).
T11 1682-1802 Sentence denotes Nonetheless, NBS1 gene heterozygosity is not a major risk factor for lymphoid malignancies in childhood and adolescence.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
2226 30-37 SequenceVariant denotes 657del5 c|DEL|657|5
2227 45-49 GeneOrGeneProduct denotes NBS1 NCBIGene:4683
2228 91-99 OrganismTaxon denotes patients NCBITaxon:9606
2229 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies MESH:D008223
2230 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome MESH:D049932
2231 165-168 DiseaseOrPhenotypicFeature denotes NBS MESH:D049932
2232 175-180 OrganismTaxon denotes human NCBITaxon:9606
2233 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease MESH:D030342
2234 259-265 DiseaseOrPhenotypicFeature denotes cancer MESH:D009369
2235 299-307 DiseaseOrPhenotypicFeature denotes lymphoma MESH:D008223
2236 312-320 DiseaseOrPhenotypicFeature denotes leukemia MESH:D007938
2237 412-416 GeneOrGeneProduct denotes NBS1 NCBIGene:4683
2238 427-434 SequenceVariant denotes 657del5 c|DEL|657|5
2239 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies MESH:D008223
2240 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma MESH:D008228
2241 552-555 DiseaseOrPhenotypicFeature denotes NHL MESH:D008228
2242 588-594 SequenceVariant denotes 643C>T c|SUB|C|643|T
2243 596-601 SequenceVariant denotes R215W p|SUB|R|215|W
2244 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia MESH:D054198
2245 683-686 DiseaseOrPhenotypicFeature denotes ALL MESH:D054198
2246 769-799 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies MESH:D008223
2247 864-872 OrganismTaxon denotes patients NCBITaxon:9606
2248 878-882 GeneOrGeneProduct denotes NBS1 NCBIGene:4683
2249 892-899 SequenceVariant denotes 657del5 c|DEL|657|5
2250 936-944 OrganismTaxon denotes patients NCBITaxon:9606
2251 950-953 DiseaseOrPhenotypicFeature denotes ALL MESH:D054198
2252 997-1000 DiseaseOrPhenotypicFeature denotes NHL MESH:D008228
2253 1032-1040 OrganismTaxon denotes patients NCBITaxon:9606
2254 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma MESH:D006689
2255 1064-1066 DiseaseOrPhenotypicFeature denotes HL MESH:D006689
2256 1096-1101 SequenceVariant denotes R215W p|SUB|R|215|W
2257 1168-1175 SequenceVariant denotes 657del5 c|DEL|657|5
2258 1251-1258 OrganismTaxon denotes patient NCBITaxon:9606
2259 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies MESH:D009369
2260 1429-1436 SequenceVariant denotes 657del5 c|DEL|657|5
2261 1644-1652 OrganismTaxon denotes patients NCBITaxon:9606
2262 1658-1661 DiseaseOrPhenotypicFeature denotes ALL MESH:D054198
2263 1666-1669 DiseaseOrPhenotypicFeature denotes NHL MESH:D008228
2264 1695-1699 GeneOrGeneProduct denotes NBS1 NCBIGene:4683
2265 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies MESH:D008223

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome 0009623
T2 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease 0006025
T3 259-265 DiseaseOrPhenotypicFeature denotes cancer 0004992
T4 299-307 DiseaseOrPhenotypicFeature denotes lymphoma 0005062
T5 312-320 DiseaseOrPhenotypicFeature denotes leukemia 0005059
T6 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma 0018908
T7 542-550 DiseaseOrPhenotypicFeature denotes lymphoma 0005062
T8 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia 0004967
T9 673-681 DiseaseOrPhenotypicFeature denotes leukemia 0005059
T10 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma 0004952
T11 1054-1062 DiseaseOrPhenotypicFeature denotes lymphoma 0005062

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 427-434 SequenceVariant denotes 657del5
T3 588-592 SequenceVariant denotes 643C
T4 596-601 SequenceVariant denotes R215W
T5 892-899 SequenceVariant denotes 657del5
T6 1096-1101 SequenceVariant denotes R215W
T7 1168-1175 SequenceVariant denotes 657del5
T8 1429-1436 SequenceVariant denotes 657del5

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 165-168 ChemicalEntity denotes NBS http://purl.obolibrary.org/obo/CHEBI_53174

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 0-7 GeneOrGeneProduct denotes Carrier
T2 8-17 GeneOrGeneProduct denotes frequency
T3 21-29 GeneOrGeneProduct denotes mutation
T4 45-49 GeneOrGeneProduct denotes NBS1
T5 50-59 GeneOrGeneProduct denotes gene in a
T6 155-163 GeneOrGeneProduct denotes syndrome
T7 164-174 GeneOrGeneProduct denotes (NBS) is a
T8 165-168 GeneOrGeneProduct denotes NBS
T9 353-364 GeneOrGeneProduct denotes frequencies
T10 381-389 GeneOrGeneProduct denotes carriers
T11 412-416 GeneOrGeneProduct denotes NBS1
T12 417-425 GeneOrGeneProduct denotes mutation
T13 623-632 GeneOrGeneProduct denotes in excess
T14 683-686 GeneOrGeneProduct denotes ALL
T15 737-746 GeneOrGeneProduct denotes mutations
T16 832-837 GeneOrGeneProduct denotes large
T17 878-882 GeneOrGeneProduct denotes NBS1
T18 883-891 GeneOrGeneProduct denotes mutation
T19 924-928 GeneOrGeneProduct denotes in 3
T20 950-953 GeneOrGeneProduct denotes ALL
T21 954-959 GeneOrGeneProduct denotes and 2
T22 980-991 GeneOrGeneProduct denotes adolescents
T23 1005-1012 GeneOrGeneProduct denotes carrier
T24 1072-1080 GeneOrGeneProduct denotes carriers
T25 1151-1160 GeneOrGeneProduct denotes frequency
T26 1176-1184 GeneOrGeneProduct denotes mutation
T27 1207-1212 GeneOrGeneProduct denotes total
T28 1298-1306 GeneOrGeneProduct denotes carriers
T29 1308-1317 GeneOrGeneProduct denotes frequency
T30 1417-1428 GeneOrGeneProduct denotes of mutation
T31 1500-1505 GeneOrGeneProduct denotes range
T32 1558-1565 GeneOrGeneProduct denotes finding
T33 1585-1594 GeneOrGeneProduct denotes frequency
T34 1602-1610 GeneOrGeneProduct denotes mutation
T35 1611-1619 GeneOrGeneProduct denotes carriers
T36 1658-1661 GeneOrGeneProduct denotes ALL
T37 1695-1699 GeneOrGeneProduct denotes NBS1
T38 1723-1728 GeneOrGeneProduct denotes not a
T39 1729-1734 GeneOrGeneProduct denotes major
T40 1740-1746 GeneOrGeneProduct denotes factor
T41 1790-1801 GeneOrGeneProduct denotes adolescence

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 0-7 GeneOrGeneProduct denotes Carrier
T2 8-17 GeneOrGeneProduct denotes frequency
T3 45-49 GeneOrGeneProduct denotes NBS1
T4 155-163 GeneOrGeneProduct denotes syndrome
T5 165-168 GeneOrGeneProduct denotes NBS
T6 412-416 GeneOrGeneProduct denotes NBS1
T7 623-632 GeneOrGeneProduct denotes in excess
T8 832-837 GeneOrGeneProduct denotes large
T9 878-882 GeneOrGeneProduct denotes NBS1
T10 980-991 GeneOrGeneProduct denotes adolescents
T11 1005-1012 GeneOrGeneProduct denotes carrier
T12 1151-1160 GeneOrGeneProduct denotes frequency
T13 1308-1317 GeneOrGeneProduct denotes frequency
T14 1585-1594 GeneOrGeneProduct denotes frequency
T15 1695-1699 GeneOrGeneProduct denotes NBS1
T16 1723-1728 GeneOrGeneProduct denotes not a
T17 1729-1734 GeneOrGeneProduct denotes major
T18 1740-1746 GeneOrGeneProduct denotes factor

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 123-135 DiseaseOrPhenotypicFeature denotes malignancies D009369
T2 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome D049932
T3 165-168 DiseaseOrPhenotypicFeature denotes NBS D049932
T4 201-208 DiseaseOrPhenotypicFeature denotes disease D004194
T5 226-245 DiseaseOrPhenotypicFeature denotes genomic instability D042822
T6 259-265 DiseaseOrPhenotypicFeature denotes cancer D009369
T7 299-307 DiseaseOrPhenotypicFeature denotes lymphoma D008223
T8 312-320 DiseaseOrPhenotypicFeature denotes leukemia D007938
T9 490-502 DiseaseOrPhenotypicFeature denotes malignancies D009369
T10 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma D008228
T11 552-555 DiseaseOrPhenotypicFeature denotes NHL D008228
T12 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia D054198
T13 683-686 DiseaseOrPhenotypicFeature denotes ALL D054198
T14 787-799 DiseaseOrPhenotypicFeature denotes malignancies D009369
T15 950-953 DiseaseOrPhenotypicFeature denotes ALL D054198
T16 997-1000 DiseaseOrPhenotypicFeature denotes NHL D008228
T17 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma D006689
T18 1064-1066 DiseaseOrPhenotypicFeature denotes HL D006689
T19 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies D009369
T20 1658-1661 DiseaseOrPhenotypicFeature denotes ALL D054198
T21 1666-1669 DiseaseOrPhenotypicFeature denotes NHL D008228
T22 1760-1772 DiseaseOrPhenotypicFeature denotes malignancies D009369

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 45-49 GeneOrGeneProduct denotes NBS1
T2 137-163 GeneOrGeneProduct denotes Nijmegen breakage syndrome
T3 165-168 GeneOrGeneProduct denotes NBS
T4 412-416 GeneOrGeneProduct denotes NBS1
T5 623-632 GeneOrGeneProduct denotes in excess
T6 878-882 GeneOrGeneProduct denotes NBS1
T7 1695-1699 GeneOrGeneProduct denotes NBS1
T8 1723-1728 GeneOrGeneProduct denotes not a

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome 0009623
T2 165-168 DiseaseOrPhenotypicFeature denotes NBS 0009623
T3 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease 0006025
T4 299-307 DiseaseOrPhenotypicFeature denotes lymphoma 0005062|0003660|0003659
T7 312-320 DiseaseOrPhenotypicFeature denotes leukemia 0005059|0004355
T9 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma 0018908|0011508
T11 552-555 DiseaseOrPhenotypicFeature denotes NHL 0018908
T12 653-687 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia (ALL) 0004967|0003541|0000870
T15 950-953 DiseaseOrPhenotypicFeature denotes ALL 0013108|0004967
T17 997-1000 DiseaseOrPhenotypicFeature denotes NHL 0018908
T18 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma 0004952
T19 1064-1066 DiseaseOrPhenotypicFeature denotes HL 0004952
T20 1658-1661 DiseaseOrPhenotypicFeature denotes ALL 0013108|0004967
T22 1666-1669 DiseaseOrPhenotypicFeature denotes NHL 0018908

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 123-135 DiseaseOrPhenotypicFeature denotes malignancies D009369
T2 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome D049932
T3 165-168 DiseaseOrPhenotypicFeature denotes NBS D049932
T4 201-208 DiseaseOrPhenotypicFeature denotes disease D004194
T5 226-245 DiseaseOrPhenotypicFeature denotes genomic instability D042822
T6 259-265 DiseaseOrPhenotypicFeature denotes cancer D009369
T7 299-307 DiseaseOrPhenotypicFeature denotes lymphoma D008223
T8 312-320 DiseaseOrPhenotypicFeature denotes leukemia D007938
T9 490-502 DiseaseOrPhenotypicFeature denotes malignancies D009369
T10 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma D008228
T11 552-555 DiseaseOrPhenotypicFeature denotes NHL D008228
T12 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia D054198
T13 683-686 DiseaseOrPhenotypicFeature denotes ALL DISEASE|D054198
T15 787-799 DiseaseOrPhenotypicFeature denotes malignancies D009369
T16 950-953 DiseaseOrPhenotypicFeature denotes ALL DISEASE|D054198
T18 997-1000 DiseaseOrPhenotypicFeature denotes NHL D008228
T19 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma D006689
T20 1064-1066 DiseaseOrPhenotypicFeature denotes HL D006689
T21 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies D009369
T22 1658-1661 DiseaseOrPhenotypicFeature denotes ALL DISEASE|D054198
T24 1666-1669 DiseaseOrPhenotypicFeature denotes NHL D008228
T25 1760-1772 DiseaseOrPhenotypicFeature denotes malignancies D009369

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 123-135 DiseaseOrPhenotypicFeature denotes malignancies D009369
T2 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome D049932
T3 165-168 DiseaseOrPhenotypicFeature denotes NBS D049932
T4 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease EisukeAdded
T5 226-245 DiseaseOrPhenotypicFeature denotes genomic instability D042822
T6 259-265 DiseaseOrPhenotypicFeature denotes cancer D009369
T7 299-307 DiseaseOrPhenotypicFeature denotes lymphoma D008223
T8 490-502 DiseaseOrPhenotypicFeature denotes malignancies D009369
T9 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma D008228
T10 552-555 DiseaseOrPhenotypicFeature denotes NHL D008228
T11 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia D054198
T12 683-686 DiseaseOrPhenotypicFeature denotes ALL DISEASE|D054198
T14 787-799 DiseaseOrPhenotypicFeature denotes malignancies D009369
T15 950-953 DiseaseOrPhenotypicFeature denotes ALL DISEASE|D054198
T17 997-1000 DiseaseOrPhenotypicFeature denotes NHL D008228
T18 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma D006689
T19 1064-1066 DiseaseOrPhenotypicFeature denotes HL D006689
T20 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies D009369
T21 1658-1661 DiseaseOrPhenotypicFeature denotes ALL DISEASE|D054198
T23 1666-1669 DiseaseOrPhenotypicFeature denotes NHL D008228
T24 1760-1772 DiseaseOrPhenotypicFeature denotes malignancies D009369

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 91-99 OrganismTaxon denotes patients
T2 175-180 OrganismTaxon denotes human
T3 864-872 OrganismTaxon denotes patients
T4 936-944 OrganismTaxon denotes patients
T5 1032-1040 OrganismTaxon denotes patients
T6 1251-1258 OrganismTaxon denotes patient
T7 1644-1652 OrganismTaxon denotes patients

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T1 165-168 ChemicalEntity denotes NBS http://purl.obolibrary.org/obo/CHEBI_53174
T8 1723-1728 GeneOrGeneProduct denotes not a
T7 1695-1699 GeneOrGeneProduct denotes NBS1
T6 878-882 GeneOrGeneProduct denotes NBS1
T5 623-632 GeneOrGeneProduct denotes in excess
T4 412-416 GeneOrGeneProduct denotes NBS1
T3 165-168 GeneOrGeneProduct denotes NBS
T2 137-163 GeneOrGeneProduct denotes Nijmegen breakage syndrome
T72404 45-49 GeneOrGeneProduct denotes NBS1
T24 1760-1772 DiseaseOrPhenotypicFeature denotes malignancies D009369
T23 1666-1669 DiseaseOrPhenotypicFeature denotes NHL D008228
T21 1658-1661 DiseaseOrPhenotypicFeature denotes ALL D054198|DISEASE
T20 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies D009369
T19 1064-1066 DiseaseOrPhenotypicFeature denotes HL D006689
T18 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma D006689
T17 997-1000 DiseaseOrPhenotypicFeature denotes NHL D008228
T15 950-953 DiseaseOrPhenotypicFeature denotes ALL D054198|DISEASE
T14 787-799 DiseaseOrPhenotypicFeature denotes malignancies D009369
T12 683-686 DiseaseOrPhenotypicFeature denotes ALL D054198|DISEASE
T11 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia D054198
T10 552-555 DiseaseOrPhenotypicFeature denotes NHL D008228
T9 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma D008228
T41592 490-502 DiseaseOrPhenotypicFeature denotes malignancies D009369
T22712 299-307 DiseaseOrPhenotypicFeature denotes lymphoma D008223
T63467 259-265 DiseaseOrPhenotypicFeature denotes cancer D009369
T33883 226-245 DiseaseOrPhenotypicFeature denotes genomic instability D042822
T3307 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease EisukeAdded
T32772 165-168 DiseaseOrPhenotypicFeature denotes NBS D049932
T70404 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome D049932
T26656 123-135 DiseaseOrPhenotypicFeature denotes malignancies D009369
T62560 1644-1652 OrganismTaxon denotes patients
T72803 1251-1258 OrganismTaxon denotes patient
T58120 1032-1040 OrganismTaxon denotes patients
T53298 936-944 OrganismTaxon denotes patients
T98554 864-872 OrganismTaxon denotes patients
T48060 175-180 OrganismTaxon denotes human
T77061 91-99 OrganismTaxon denotes patients
T86235 1429-1436 SequenceVariant denotes 657del5
T38219 1168-1175 SequenceVariant denotes 657del5
T73694 1096-1101 SequenceVariant denotes R215W
T43890 892-899 SequenceVariant denotes 657del5
T95296 596-601 SequenceVariant denotes R215W
T40897 588-592 SequenceVariant denotes 643C
T77823 427-434 SequenceVariant denotes 657del5
T42986 30-37 SequenceVariant denotes 657del5

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 181-200 HP_0000007 denotes autosomal recessive
T2 259-265 HP_0002664 denotes cancer
T3 299-307 HP_0002665 denotes lymphoma
T4 312-320 HP_0001909 denotes leukemia
T5 530-550 HP_0012539 denotes non-Hodgkin lymphoma
T6 534-550 HP_0012189 denotes Hodgkin lymphoma
T7 542-550 HP_0002665 denotes lymphoma
T8 653-681 HP_0006721 denotes acute lymphoblastic leukemia
T9 673-681 HP_0001909 denotes leukemia
T10 1046-1062 HP_0012189 denotes Hodgkin lymphoma
T11 1054-1062 HP_0002665 denotes lymphoma

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
16152606-3#38#43#geners34767364 596-601 geners34767364 denotes R215W
16152606-3#30#36#geners34767364 588-594 geners34767364 denotes 643C>T
16152606-3#95#123#diseaseC0023449 653-681 diseaseC0023449 denotes acute lymphoblastic leukemia
16152606-3#125#128#diseaseC0023449 683-686 diseaseC0023449 denotes ALL
16152606-3#95#123#diseaseC0023449 653-681 diseaseC0023449 denotes acute lymphoblastic leukemia
16152606-3#125#128#diseaseC0023449 683-686 diseaseC0023449 denotes ALL
38#43#geners3476736495#123#diseaseC0023449 16152606-3#38#43#geners34767364 16152606-3#95#123#diseaseC0023449 associated_with R215W,acute lymphoblastic leukemia
38#43#geners34767364125#128#diseaseC0023449 16152606-3#38#43#geners34767364 16152606-3#125#128#diseaseC0023449 associated_with R215W,ALL
38#43#geners3476736495#123#diseaseC0023449 16152606-3#38#43#geners34767364 16152606-3#95#123#diseaseC0023449 associated_with R215W,acute lymphoblastic leukemia
38#43#geners34767364125#128#diseaseC0023449 16152606-3#38#43#geners34767364 16152606-3#125#128#diseaseC0023449 associated_with R215W,ALL
30#36#geners3476736495#123#diseaseC0023449 16152606-3#30#36#geners34767364 16152606-3#95#123#diseaseC0023449 associated_with 643C>T,acute lymphoblastic leukemia
30#36#geners34767364125#128#diseaseC0023449 16152606-3#30#36#geners34767364 16152606-3#125#128#diseaseC0023449 associated_with 643C>T,ALL
30#36#geners3476736495#123#diseaseC0023449 16152606-3#30#36#geners34767364 16152606-3#95#123#diseaseC0023449 associated_with 643C>T,acute lymphoblastic leukemia
30#36#geners34767364125#128#diseaseC0023449 16152606-3#30#36#geners34767364 16152606-3#125#128#diseaseC0023449 associated_with 643C>T,ALL

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
16152606-5#4#8#gene4683 878-882 gene4683 denotes NBS1
16152606-5#4#8#gene55655 878-882 gene55655 denotes NBS1
16152606-5#4#8#gene4683 878-882 gene4683 denotes NBS1
16152606-5#4#8#gene55655 878-882 gene55655 denotes NBS1
16152606-5#4#8#gene4683 878-882 gene4683 denotes NBS1
16152606-5#4#8#gene55655 878-882 gene55655 denotes NBS1
16152606-5#4#8#gene4683 878-882 gene4683 denotes NBS1
16152606-5#4#8#gene55655 878-882 gene55655 denotes NBS1
16152606-5#76#79#diseaseC0023449 950-953 diseaseC0023449 denotes ALL
16152606-5#123#126#diseaseC0024305 997-1000 diseaseC0024305 denotes NHL
16152606-5#172#188#diseaseC0019829 1046-1062 diseaseC0019829 denotes Hodgkin lymphoma
16152606-5#190#192#diseaseC0019829 1064-1066 diseaseC0019829 denotes HL
4#8#gene468376#79#diseaseC0023449 16152606-5#4#8#gene4683 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene4683123#126#diseaseC0024305 16152606-5#4#8#gene4683 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene4683172#188#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene4683190#192#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL
4#8#gene5565576#79#diseaseC0023449 16152606-5#4#8#gene55655 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene55655123#126#diseaseC0024305 16152606-5#4#8#gene55655 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene55655172#188#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene55655190#192#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL
4#8#gene468376#79#diseaseC0023449 16152606-5#4#8#gene4683 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene4683123#126#diseaseC0024305 16152606-5#4#8#gene4683 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene4683172#188#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene4683190#192#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL
4#8#gene5565576#79#diseaseC0023449 16152606-5#4#8#gene55655 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene55655123#126#diseaseC0024305 16152606-5#4#8#gene55655 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene55655172#188#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene55655190#192#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL
4#8#gene468376#79#diseaseC0023449 16152606-5#4#8#gene4683 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene4683123#126#diseaseC0024305 16152606-5#4#8#gene4683 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene4683172#188#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene4683190#192#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL
4#8#gene5565576#79#diseaseC0023449 16152606-5#4#8#gene55655 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene55655123#126#diseaseC0024305 16152606-5#4#8#gene55655 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene55655172#188#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene55655190#192#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL
4#8#gene468376#79#diseaseC0023449 16152606-5#4#8#gene4683 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene4683123#126#diseaseC0024305 16152606-5#4#8#gene4683 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene4683172#188#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene4683190#192#diseaseC0019829 16152606-5#4#8#gene4683 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL
4#8#gene5565576#79#diseaseC0023449 16152606-5#4#8#gene55655 16152606-5#76#79#diseaseC0023449 associated_with NBS1,ALL
4#8#gene55655123#126#diseaseC0024305 16152606-5#4#8#gene55655 16152606-5#123#126#diseaseC0024305 associated_with NBS1,NHL
4#8#gene55655172#188#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#172#188#diseaseC0019829 associated_with NBS1,Hodgkin lymphoma
4#8#gene55655190#192#diseaseC0019829 16152606-5#4#8#gene55655 16152606-5#190#192#diseaseC0019829 associated_with NBS1,HL

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 30-37 DNAMutation:c|DEL|657|5 denotes 657del5
T2 427-434 DNAMutation:c|DEL|657|5 denotes 657del5
T3 588-594 DNAMutation:c|SUB|C|643|T denotes 643C>T
T4 596-601 ProteinMutation:p|SUB|R|215|W denotes R215W
T5 892-899 DNAMutation:c|DEL|657|5 denotes 657del5
T6 1096-1101 ProteinMutation:p|SUB|R|215|W denotes R215W
T7 1168-1175 DNAMutation:c|DEL|657|5 denotes 657del5
T8 1429-1436 DNAMutation:c|DEL|657|5 denotes 657del5

DisGeNET

Id Subject Object Predicate Lexical cue
T0 45-49 gene:55655 denotes NBS1
T1 123-135 disease:C0006826 denotes malignancies
T2 45-49 gene:4683 denotes NBS1
T3 123-135 disease:C0006826 denotes malignancies
T4 878-882 gene:55655 denotes NBS1
T5 997-1000 disease:C0079745 denotes NHL
T6 878-882 gene:55655 denotes NBS1
T7 950-953 disease:C0023449 denotes ALL
T8 878-882 gene:4683 denotes NBS1
T9 997-1000 disease:C0024305 denotes NHL
T10 878-882 gene:4683 denotes NBS1
T11 997-1000 disease:C0079745 denotes NHL
T12 878-882 gene:55655 denotes NBS1
T13 997-1000 disease:C0024305 denotes NHL
T14 878-882 gene:55655 denotes NBS1
T15 950-953 disease:C1961102 denotes ALL
T16 878-882 gene:4683 denotes NBS1
T17 1046-1062 disease:C0019829 denotes Hodgkin lymphoma
T18 878-882 gene:55655 denotes NBS1
T19 1046-1062 disease:C0019829 denotes Hodgkin lymphoma
T20 878-882 gene:4683 denotes NBS1
T21 1064-1066 disease:C0019829 denotes HL
T22 878-882 gene:55655 denotes NBS1
T23 1064-1066 disease:C0019829 denotes HL
T24 878-882 gene:4683 denotes NBS1
T25 950-953 disease:C0023449 denotes ALL
T26 878-882 gene:4683 denotes NBS1
T27 950-953 disease:C1961102 denotes ALL
R1 T0 T1 associated_with NBS1,malignancies
R2 T2 T3 associated_with NBS1,malignancies
R3 T4 T5 associated_with NBS1,NHL
R4 T6 T7 associated_with NBS1,ALL
R5 T8 T9 associated_with NBS1,NHL
R6 T10 T11 associated_with NBS1,NHL
R7 T12 T13 associated_with NBS1,NHL
R8 T14 T15 associated_with NBS1,ALL
R9 T16 T17 associated_with NBS1,Hodgkin lymphoma
R10 T18 T19 associated_with NBS1,Hodgkin lymphoma
R11 T20 T21 associated_with NBS1,HL
R12 T22 T23 associated_with NBS1,HL
R13 T24 T25 associated_with NBS1,ALL
R14 T26 T27 associated_with NBS1,ALL

biored-valid-deepseek-nr-g

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 74-99 OrganismTaxon denotes Polish pediatric patients
T4 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T5 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T6 165-168 DiseaseOrPhenotypicFeature denotes NBS
T7 175-180 OrganismTaxon denotes human
T8 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T9 259-280 DiseaseOrPhenotypicFeature denotes cancer predisposition
T10 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T11 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T12 412-413 DiseaseOrPhenotypicFeature denotes N
T13 427-434 SequenceVariant denotes 657del5
T14 450-457 OrganismTaxon denotes Russian
T15 458-466 OrganismTaxon denotes children
T16 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T17 511-517 OrganismTaxon denotes Polish
T18 518-524 OrganismTaxon denotes adults
T19 530-556 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma (NHL)
T20 588-594 SequenceVariant denotes 643C>T
T21 596-601 SequenceVariant denotes R215W
T22 639-647 OrganismTaxon denotes children
T23 653-687 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia (ALL)
T24 778-799 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T25 847-853 OrganismTaxon denotes Polish
T26 854-863 OrganismTaxon denotes pediatric
T27 864-872 OrganismTaxon denotes patients
T28 878-881 GeneOrGeneProduct denotes NBS
T29 892-899 SequenceVariant denotes 657del5
T30 950-953 DiseaseOrPhenotypicFeature denotes ALL
T31 963-966 OrganismTaxon denotes 212
T32 980-991 OrganismTaxon denotes adolescents
T33 998-1000 DiseaseOrPhenotypicFeature denotes HL
T34 1029-1031 OrganismTaxon denotes 63
T35 1046-1067 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma (HL)
T36 1098-1099 GeneOrGeneProduct denotes 1
T37 1168-1175 SequenceVariant denotes 657del5
T38 1216-1221 OrganismTaxon denotes 6,984
T39 1222-1230 OrganismTaxon denotes controls
T40 1344-1354 OrganismTaxon denotes population

biored-valid

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 91-99 OrganismTaxon denotes patients
T4 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T5 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T6 165-168 DiseaseOrPhenotypicFeature denotes NBS
T7 175-180 OrganismTaxon denotes human
T8 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease
T9 259-265 DiseaseOrPhenotypicFeature denotes cancer
T10 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T11 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T12 412-416 GeneOrGeneProduct denotes NBS1
T13 427-434 SequenceVariant denotes 657del5
T14 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T15 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T16 552-555 DiseaseOrPhenotypicFeature denotes NHL
T17 588-594 SequenceVariant denotes 643C>T
T18 596-601 SequenceVariant denotes R215W
T19 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T20 683-686 DiseaseOrPhenotypicFeature denotes ALL
T21 769-799 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T22 864-872 OrganismTaxon denotes patients
T23 878-882 GeneOrGeneProduct denotes NBS1
T24 892-899 SequenceVariant denotes 657del5
T25 936-944 OrganismTaxon denotes patients
T26 950-953 DiseaseOrPhenotypicFeature denotes ALL
T27 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T28 1032-1040 OrganismTaxon denotes patients
T29 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T30 1064-1066 DiseaseOrPhenotypicFeature denotes HL
T31 1096-1101 SequenceVariant denotes R215W
T32 1168-1175 SequenceVariant denotes 657del5
T33 1251-1258 OrganismTaxon denotes patient
T34 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T35 1429-1436 SequenceVariant denotes 657del5
T36 1644-1652 OrganismTaxon denotes patients
T37 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T38 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T39 1695-1699 GeneOrGeneProduct denotes NBS1
T40 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-deepseek-nr-ng

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T4 137-169 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome (NBS)
T5 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T6 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T7 412-416 GeneOrGeneProduct denotes NBS1
T8 427-434 SequenceVariant denotes 657del5
T9 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T10 552-555 DiseaseOrPhenotypicFeature denotes NHL
T11 588-594 SequenceVariant denotes 643C>T
T12 596-601 SequenceVariant denotes R215W
T13 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T14 683-686 DiseaseOrPhenotypicFeature denotes ALL
T15 878-882 GeneOrGeneProduct denotes NBS1
T16 892-899 SequenceVariant denotes 657del5
T17 950-953 DiseaseOrPhenotypicFeature denotes ALL
T18 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T19 1046-1067 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma (HL)
T20 1751-1785 DiseaseOrPhenotypicFeature denotes lymphoid malignancies in childhood

biored-valid-deepseek-r-ng

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T4 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T5 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T6 412-416 GeneOrGeneProduct denotes NBS1
T7 427-434 SequenceVariant denotes 657del5
T8 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T9 552-555 DiseaseOrPhenotypicFeature denotes NHL
T10 588-594 SequenceVariant denotes 643C>T
T11 596-601 SequenceVariant denotes R215W
T12 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T13 683-686 DiseaseOrPhenotypicFeature denotes ALL
T14 878-882 GeneOrGeneProduct denotes NBS1
T15 892-899 SequenceVariant denotes 657del5
T16 950-953 DiseaseOrPhenotypicFeature denotes ALL
T17 997-1000 DiseaseOrPhenotypicFeature denotes NHL

biored-valid-deepseek-r-g

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-54 GeneOrGeneProduct denotes NBS1 gene
T3 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T4 165-168 DiseaseOrPhenotypicFeature denotes NBS
T5 175-180 OrganismTaxon denotes human
T6 259-265 DiseaseOrPhenotypicFeature denotes cancer
T7 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T8 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T9 412-416 GeneOrGeneProduct denotes NBS1
T10 427-434 SequenceVariant denotes 657del5
T11 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T12 552-555 DiseaseOrPhenotypicFeature denotes NHL
T13 588-594 SequenceVariant denotes 643C>T
T14 596-601 SequenceVariant denotes R215W
T15 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T16 683-686 DiseaseOrPhenotypicFeature denotes ALL

biored-valid-gemini-nr-ng

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 74-80 OrganismTaxon denotes Polish
T4 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T5 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T6 165-168 DiseaseOrPhenotypicFeature denotes NBS
T7 175-180 OrganismTaxon denotes human
T8 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T9 250-280 DiseaseOrPhenotypicFeature denotes enhanced cancer predisposition
T10 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T11 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T12 412-416 GeneOrGeneProduct denotes NBS1
T13 417-434 SequenceVariant denotes mutation, 657del5
T14 450-457 OrganismTaxon denotes Russian
T15 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T16 511-517 OrganismTaxon denotes Polish
T17 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T18 552-555 DiseaseOrPhenotypicFeature denotes NHL
T19 588-594 SequenceVariant denotes 643C>T
T20 596-601 SequenceVariant denotes R215W
T21 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T22 683-686 DiseaseOrPhenotypicFeature denotes ALL
T23 769-799 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T24 813-816 ChemicalEntity denotes DNA
T25 847-853 OrganismTaxon denotes Polish
T26 878-882 GeneOrGeneProduct denotes NBS1
T27 883-899 SequenceVariant denotes mutation 657del5
T28 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T29 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T30 1096-1101 SequenceVariant denotes R215W
T31 1168-1175 SequenceVariant denotes 657del5
T32 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T33 1478-1484 OrganismTaxon denotes Polish
T34 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T35 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T36 1695-1699 GeneOrGeneProduct denotes NBS1
T37 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gemini-r-ng

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T4 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T5 165-168 DiseaseOrPhenotypicFeature denotes NBS
T6 175-180 OrganismTaxon denotes human
T7 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease
T8 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T9 259-280 DiseaseOrPhenotypicFeature denotes cancer predisposition
T10 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T11 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T12 412-416 GeneOrGeneProduct denotes NBS1
T13 427-434 SequenceVariant denotes 657del5
T14 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T15 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T16 552-555 DiseaseOrPhenotypicFeature denotes NHL
T17 588-594 SequenceVariant denotes 643C>T
T18 596-601 SequenceVariant denotes R215W
T19 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T20 683-686 DiseaseOrPhenotypicFeature denotes ALL
T21 769-799 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T22 813-816 ChemicalEntity denotes DNA
T23 878-882 GeneOrGeneProduct denotes NBS1
T24 892-899 SequenceVariant denotes 657del5
T25 950-953 DiseaseOrPhenotypicFeature denotes ALL
T26 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T27 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T28 1096-1101 SequenceVariant denotes R215W
T29 1168-1175 SequenceVariant denotes 657del5
T30 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T31 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T32 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T33 1695-1699 GeneOrGeneProduct denotes NBS1
T34 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gemini-r-g

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T4 137-169 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome (NBS)
T5 175-180 OrganismTaxon denotes human
T6 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T7 259-265 DiseaseOrPhenotypicFeature denotes cancer
T8 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T9 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T10 412-416 GeneOrGeneProduct denotes NBS1
T11 427-434 SequenceVariant denotes 657del5
T12 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T13 530-556 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma (NHL)
T14 588-594 SequenceVariant denotes 643C>T
T15 596-601 SequenceVariant denotes R215W
T16 653-687 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia (ALL)
T17 769-799 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T18 878-882 GeneOrGeneProduct denotes NBS1
T19 892-899 SequenceVariant denotes 657del5
T20 950-953 DiseaseOrPhenotypicFeature denotes ALL
T21 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T22 1046-1067 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma (HL)
T23 1096-1101 SequenceVariant denotes R215W
T24 1168-1175 SequenceVariant denotes 657del5
T25 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T26 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T27 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T28 1695-1699 GeneOrGeneProduct denotes NBS1
T29 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gpt-nr-ng

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-54 GeneOrGeneProduct denotes NBS1 gene
T3 114-135 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T4 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T5 164-169 DiseaseOrPhenotypicFeature denotes (NBS)
T6 175-180 OrganismTaxon denotes human
T7 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T8 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T9 412-416 GeneOrGeneProduct denotes NBS1
T10 427-434 SequenceVariant denotes 657del5
T11 481-502 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T12 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T13 551-556 DiseaseOrPhenotypicFeature denotes (NHL)
T14 588-594 SequenceVariant denotes 643C>T
T15 596-601 SequenceVariant denotes R215W
T16 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T17 682-688 DiseaseOrPhenotypicFeature denotes (ALL).
T18 778-799 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T19 813-816 ChemicalEntity denotes DNA
T20 878-882 GeneOrGeneProduct denotes NBS1
T21 892-899 SequenceVariant denotes 657del5
T22 950-953 DiseaseOrPhenotypicFeature denotes ALL
T23 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T24 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T25 1063-1068 DiseaseOrPhenotypicFeature denotes (HL).
T26 1096-1101 SequenceVariant denotes R215W
T27 1168-1175 SequenceVariant denotes 657del5
T28 1429-1436 SequenceVariant denotes 657del5
T29 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T30 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T31 1695-1704 GeneOrGeneProduct denotes NBS1 gene
T32 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gpt-nr-g

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-54 GeneOrGeneProduct denotes NBS1 gene
T3 114-135 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T4 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T5 165-168 DiseaseOrPhenotypicFeature denotes NBS
T6 175-180 OrganismTaxon denotes human
T7 259-265 DiseaseOrPhenotypicFeature denotes cancer
T8 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T9 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T10 412-416 GeneOrGeneProduct denotes NBS1
T11 427-434 SequenceVariant denotes 657del5
T12 481-502 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T13 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T14 552-555 DiseaseOrPhenotypicFeature denotes NHL
T15 588-594 SequenceVariant denotes 643C>T
T16 596-601 SequenceVariant denotes R215W
T17 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T18 683-686 DiseaseOrPhenotypicFeature denotes ALL
T19 778-799 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T20 878-882 GeneOrGeneProduct denotes NBS1
T21 892-899 SequenceVariant denotes 657del5
T22 950-953 DiseaseOrPhenotypicFeature denotes ALL
T23 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T24 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T25 1064-1066 DiseaseOrPhenotypicFeature denotes HL
T26 1096-1101 SequenceVariant denotes R215W
T27 1168-1175 SequenceVariant denotes 657del5
T28 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T29 1429-1436 SequenceVariant denotes 657del5
T30 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T31 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T32 1695-1704 GeneOrGeneProduct denotes NBS1 gene
T33 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gpt-r-ng

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 114-135 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T4 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T5 165-168 DiseaseOrPhenotypicFeature denotes NBS
T6 175-180 OrganismTaxon denotes human
T7 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T8 250-280 DiseaseOrPhenotypicFeature denotes enhanced cancer predisposition
T9 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T10 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T11 412-416 GeneOrGeneProduct denotes NBS1
T12 427-434 SequenceVariant denotes 657del5
T13 481-502 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T14 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T15 552-555 DiseaseOrPhenotypicFeature denotes NHL
T16 588-594 SequenceVariant denotes 643C>T
T17 596-601 SequenceVariant denotes R215W
T18 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T19 683-686 DiseaseOrPhenotypicFeature denotes ALL
T20 778-799 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T21 813-816 ChemicalEntity denotes DNA
T22 878-882 GeneOrGeneProduct denotes NBS1
T23 892-899 SequenceVariant denotes 657del5
T24 950-953 DiseaseOrPhenotypicFeature denotes ALL
T25 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T26 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T27 1064-1066 DiseaseOrPhenotypicFeature denotes HL
T28 1096-1101 SequenceVariant denotes R215W
T29 1168-1175 SequenceVariant denotes 657del5
T30 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T31 1429-1436 SequenceVariant denotes 657del5
T32 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T33 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T34 1695-1699 GeneOrGeneProduct denotes NBS1
T35 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gpt-r-g

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-54 GeneOrGeneProduct denotes NBS1 gene
T3 114-135 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T4 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T5 165-168 DiseaseOrPhenotypicFeature denotes NBS
T6 175-180 OrganismTaxon denotes human
T7 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T8 259-265 DiseaseOrPhenotypicFeature denotes cancer
T9 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T10 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T11 412-416 GeneOrGeneProduct denotes NBS1
T12 427-434 SequenceVariant denotes 657del5
T13 481-502 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T14 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T15 552-555 DiseaseOrPhenotypicFeature denotes NHL
T16 588-594 SequenceVariant denotes 643C>T
T17 596-601 SequenceVariant denotes R215W
T18 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T19 683-686 DiseaseOrPhenotypicFeature denotes ALL
T20 778-799 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T21 813-816 ChemicalEntity denotes DNA
T22 878-882 GeneOrGeneProduct denotes NBS1
T23 892-899 SequenceVariant denotes 657del5
T24 950-953 DiseaseOrPhenotypicFeature denotes ALL
T25 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T26 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T27 1064-1066 DiseaseOrPhenotypicFeature denotes HL
T28 1096-1101 SequenceVariant denotes R215W
T29 1168-1175 SequenceVariant denotes 657del5
T30 1429-1436 SequenceVariant denotes 657del5
T31 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T32 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T33 1695-1704 GeneOrGeneProduct denotes NBS1 gene
T34 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gemini-nr-g

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 74-80 OrganismTaxon denotes Polish
T4 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T5 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T6 165-168 DiseaseOrPhenotypicFeature denotes NBS
T7 175-180 OrganismTaxon denotes human
T8 181-208 DiseaseOrPhenotypicFeature denotes autosomal recessive disease
T9 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T10 259-265 DiseaseOrPhenotypicFeature denotes cancer
T11 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T12 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T13 412-416 GeneOrGeneProduct denotes NBS1
T14 417-425 SequenceVariant denotes mutation
T15 427-434 SequenceVariant denotes 657del5
T16 450-457 OrganismTaxon denotes Russian
T17 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T18 511-517 OrganismTaxon denotes Polish
T19 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T20 552-555 DiseaseOrPhenotypicFeature denotes NHL
T21 588-594 SequenceVariant denotes 643C>T
T22 596-601 SequenceVariant denotes R215W
T23 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T24 683-686 DiseaseOrPhenotypicFeature denotes ALL
T25 737-745 SequenceVariant denotes mutation
T26 769-799 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T27 847-853 OrganismTaxon denotes Polish
T28 878-882 GeneOrGeneProduct denotes NBS1
T29 883-891 SequenceVariant denotes mutation
T30 892-899 SequenceVariant denotes 657del5
T31 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T32 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T33 1096-1101 SequenceVariant denotes R215W
T34 1168-1175 SequenceVariant denotes 657del5
T35 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T36 1420-1428 SequenceVariant denotes mutation
T37 1478-1484 OrganismTaxon denotes Polish
T38 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T39 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T40 1695-1699 GeneOrGeneProduct denotes NBS1
T41 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gpt-r-m

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 91-99 OrganismTaxon denotes patients
T4 105-135 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T5 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T6 165-168 DiseaseOrPhenotypicFeature denotes NBS
T7 175-180 OrganismTaxon denotes human
T8 259-265 DiseaseOrPhenotypicFeature denotes cancer
T9 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T10 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T11 412-416 GeneOrGeneProduct denotes NBS1
T12 427-434 SequenceVariant denotes 657del5
T13 458-466 OrganismTaxon denotes children
T14 472-502 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T15 518-524 OrganismTaxon denotes adults
T16 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T17 552-555 DiseaseOrPhenotypicFeature denotes NHL
T18 588-594 SequenceVariant denotes 643C>T
T19 596-601 SequenceVariant denotes R215W
T20 639-647 OrganismTaxon denotes children
T21 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T22 683-686 DiseaseOrPhenotypicFeature denotes ALL
T23 769-799 DiseaseOrPhenotypicFeature denotes sporadic lymphoid malignancies
T24 864-872 OrganismTaxon denotes patients
T25 878-882 GeneOrGeneProduct denotes NBS1
T26 892-899 SequenceVariant denotes 657del5
T27 936-944 OrganismTaxon denotes patients
T28 950-953 DiseaseOrPhenotypicFeature denotes ALL
T29 967-975 OrganismTaxon denotes children
T30 980-991 OrganismTaxon denotes adolescents
T31 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T32 1032-1040 OrganismTaxon denotes patients
T33 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T34 1064-1066 DiseaseOrPhenotypicFeature denotes HL
T35 1096-1101 SequenceVariant denotes R215W
T36 1168-1175 SequenceVariant denotes 657del5
T37 1222-1230 OrganismTaxon denotes controls
T38 1429-1436 SequenceVariant denotes 657del5
T39 1644-1652 OrganismTaxon denotes patients
T40 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T41 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T42 1695-1699 GeneOrGeneProduct denotes NBS1
T43 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-gemini-r-m

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 74-80 OrganismTaxon denotes Polish
T4 91-99 OrganismTaxon denotes patients
T5 114-135 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T6 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T7 165-168 DiseaseOrPhenotypicFeature denotes NBS
T8 175-180 OrganismTaxon denotes human
T9 226-245 DiseaseOrPhenotypicFeature denotes genomic instability
T10 259-265 DiseaseOrPhenotypicFeature denotes cancer
T11 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T12 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T13 381-389 OrganismTaxon denotes carriers
T14 412-416 GeneOrGeneProduct denotes NBS1
T15 427-434 SequenceVariant denotes 657del5
T16 450-457 OrganismTaxon denotes Russian
T17 458-466 OrganismTaxon denotes children
T18 481-502 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T19 511-517 OrganismTaxon denotes Polish
T20 518-524 OrganismTaxon denotes adults
T21 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T22 552-555 DiseaseOrPhenotypicFeature denotes NHL
T23 588-594 SequenceVariant denotes 643C>T
T24 596-601 SequenceVariant denotes R215W
T25 639-647 OrganismTaxon denotes children
T26 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T27 683-686 DiseaseOrPhenotypicFeature denotes ALL
T28 778-799 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T29 847-853 OrganismTaxon denotes Polish
T30 864-872 OrganismTaxon denotes patients
T31 878-882 GeneOrGeneProduct denotes NBS1
T32 892-899 SequenceVariant denotes 657del5
T33 936-944 OrganismTaxon denotes patients
T34 950-953 DiseaseOrPhenotypicFeature denotes ALL
T35 967-975 OrganismTaxon denotes children
T36 980-991 OrganismTaxon denotes adolescents
T37 997-1000 DiseaseOrPhenotypicFeature denotes NHL
T38 1005-1012 OrganismTaxon denotes carrier
T39 1046-1062 DiseaseOrPhenotypicFeature denotes Hodgkin lymphoma
T40 1072-1080 OrganismTaxon denotes carriers
T41 1096-1101 SequenceVariant denotes R215W
T42 1168-1175 SequenceVariant denotes 657del5
T43 1222-1230 OrganismTaxon denotes controls
T44 1251-1258 OrganismTaxon denotes patient
T45 1298-1306 OrganismTaxon denotes carriers
T46 1360-1372 DiseaseOrPhenotypicFeature denotes malignancies
T47 1429-1436 SequenceVariant denotes 657del5
T48 1478-1484 OrganismTaxon denotes Polish
T49 1644-1652 OrganismTaxon denotes patients
T50 1658-1661 DiseaseOrPhenotypicFeature denotes ALL
T51 1666-1669 DiseaseOrPhenotypicFeature denotes NHL
T52 1695-1699 GeneOrGeneProduct denotes NBS1
T53 1751-1772 DiseaseOrPhenotypicFeature denotes lymphoid malignancies

biored-valid-deepseek-r-m

Id Subject Object Predicate Lexical cue
T1 30-37 SequenceVariant denotes 657del5
T2 45-49 GeneOrGeneProduct denotes NBS1
T3 114-135 DiseaseOrPhenotypicFeature denotes lymphoid malignancies
T4 137-163 DiseaseOrPhenotypicFeature denotes Nijmegen breakage syndrome
T5 165-168 DiseaseOrPhenotypicFeature denotes NBS
T6 175-180 OrganismTaxon denotes human
T7 299-307 DiseaseOrPhenotypicFeature denotes lymphoma
T8 312-320 DiseaseOrPhenotypicFeature denotes leukemia
T9 412-416 GeneOrGeneProduct denotes NBS1
T10 427-434 SequenceVariant denotes 657del5
T11 530-550 DiseaseOrPhenotypicFeature denotes non-Hodgkin lymphoma
T12 552-555 DiseaseOrPhenotypicFeature denotes NHL
T13 588-594 SequenceVariant denotes 643C>T
T14 596-601 SequenceVariant denotes R215W
T15 653-681 DiseaseOrPhenotypicFeature denotes acute lymphoblastic leukemia
T16 683-686 DiseaseOrPhenotypicFeature denotes ALL