PubMed:16120104 / 346-654
Annnotations
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 0-308 | Sentence | denotes | We have investigated three other single-nucleotide polymorphisms in the hPER2 gene, one downstream of the transcription start site (C-1228T), one in exon 2 in the 5'-untranslated region (5'-UTR) (C111G), and one missense mutation (G3853A) causing a glycine to glutamine substitution in the predicted protein. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 2215 | 72-77 | GeneOrGeneProduct | denotes | hPER2 | NCBIGene:8864 |
| 2216 | 132-139 | SequenceVariant | denotes | C-1228T | c|SUB|C|-1228|T |
| 2217 | 196-201 | SequenceVariant | denotes | C111G | c|SUB|C|111|G |
| 2218 | 231-237 | SequenceVariant | denotes | G3853A | c|SUB|G|3853|A |
| 2219 | 249-269 | SequenceVariant | denotes | glycine to glutamine | p|SUB|G||Q |
LitCoin-SeqVar
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-139 | SequenceVariant | denotes | C-1228T |
| T2 | 196-201 | SequenceVariant | denotes | C111G |
| T3 | 231-237 | SequenceVariant | denotes | G3853A |
LitCoin-Chemical-MeSH-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 249-256 | ChemicalEntity | denotes | glycine | http://purl.obolibrary.org/obo/CHEBI_57305|http://purl.obolibrary.org/obo/CHEBI_29947|http://purl.obolibrary.org/obo/CHEBI_15428 |
| T4 | 260-269 | ChemicalEntity | denotes | glutamine | http://purl.obolibrary.org/obo/CHEBI_28300 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12 | 27-32 | GeneOrGeneProduct | denotes | other |
| T13 | 72-77 | GeneOrGeneProduct | denotes | hPER2 |
| T14 | 106-119 | GeneOrGeneProduct | denotes | transcription |
| T15 | 120-125 | GeneOrGeneProduct | denotes | start |
| T16 | 187-193 | GeneOrGeneProduct | denotes | 5'-UTR |
| T17 | 212-220 | GeneOrGeneProduct | denotes | missense |
| T18 | 221-229 | GeneOrGeneProduct | denotes | mutation |
| T19 | 260-269 | GeneOrGeneProduct | denotes | glutamine |
| T20 | 300-307 | GeneOrGeneProduct | denotes | protein |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 27-32 | GeneOrGeneProduct | denotes | other |
| T9 | 72-77 | GeneOrGeneProduct | denotes | hPER2 |
| T10 | 106-119 | GeneOrGeneProduct | denotes | transcription |
| T11 | 120-125 | GeneOrGeneProduct | denotes | start |
| T12 | 187-193 | GeneOrGeneProduct | denotes | 5'-UTR |
| T13 | 260-269 | GeneOrGeneProduct | denotes | glutamine |
| T14 | 300-307 | GeneOrGeneProduct | denotes | protein |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 72-77 | GeneOrGeneProduct | denotes | hPER2 |
| T7 | 290-307 | GeneOrGeneProduct | denotes | predicted protein |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T4 | 260-269 | ChemicalEntity | denotes | glutamine | http://purl.obolibrary.org/obo/CHEBI_28300 |
| T1 | 249-256 | ChemicalEntity | denotes | glycine | http://purl.obolibrary.org/obo/CHEBI_15428|http://purl.obolibrary.org/obo/CHEBI_29947|http://purl.obolibrary.org/obo/CHEBI_57305 |
| T7 | 290-307 | GeneOrGeneProduct | denotes | predicted protein | |
| T6 | 72-77 | GeneOrGeneProduct | denotes | hPER2 | |
| T65119 | 231-237 | SequenceVariant | denotes | G3853A | |
| T88801 | 196-201 | SequenceVariant | denotes | C111G | |
| T68292 | 132-139 | SequenceVariant | denotes | C-1228T |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 132-139 | DNAMutation:c|SUB|C|-1228|T | denotes | C-1228T |
| T2 | 196-201 | DNAMutation:c|SUB|C|111|G | denotes | C111G |
| T3 | 231-237 | DNAMutation:c|SUB|G|3853|A | denotes | G3853A |