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PubMed:16051693 JSONTXT

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LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
2119 20-24 GeneOrGeneProduct denotes PEMT NCBIGene:10400
2120 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease MESH:D065626
2121 86-91 DiseaseOrPhenotypicFeature denotes NAFLD MESH:D065626
2122 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase NCBIGene:10400
2123 140-144 GeneOrGeneProduct denotes PEMT NCBIGene:10400
2124 156-175 ChemicalEntity denotes phosphatidylcholine MESH:D010713
2125 187-191 GeneOrGeneProduct denotes PEMT NCBIGene:18618
2126 201-205 OrganismTaxon denotes mice NCBITaxon:10090
2127 211-223 DiseaseOrPhenotypicFeature denotes fatty livers MESH:D005234
2128 253-259 OrganismTaxon denotes humans NCBITaxon:9606
2129 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease MESH:D065626
2130 295-300 DiseaseOrPhenotypicFeature denotes NAFLD MESH:D065626
2131 327-331 GeneOrGeneProduct denotes PEMT NCBIGene:10400
2132 372-378 OrganismTaxon denotes humans NCBITaxon:9606
2133 387-398 DiseaseOrPhenotypicFeature denotes fatty liver MESH:D005234
2134 411-417 OrganismTaxon denotes humans NCBITaxon:9606
2135 423-428 DiseaseOrPhenotypicFeature denotes NAFLD MESH:D065626
2136 494-498 GeneOrGeneProduct denotes PEMT NCBIGene:10400
2137 517-522 SequenceVariant denotes V175M DBSNP:rs7946
2138 537-542 SequenceVariant denotes V175M DBSNP:rs7946
2139 617-631 CellLine denotes McArdle-RH7777 NCBITaxon:10116
2140 667-671 GeneOrGeneProduct denotes PEMT NCBIGene:25511
2141 698-703 SequenceVariant denotes V175M DBSNP:rs7946
2142 712-734 SequenceVariant denotes Met/Met at residue 175 DBSNP:rs7946
2143 783-788 DiseaseOrPhenotypicFeature denotes NAFLD MESH:D065626
2144 902-907 OrganismTaxon denotes human NCBITaxon:9606
2145 908-912 GeneOrGeneProduct denotes PEMT NCBIGene:10400
2146 919-924 SequenceVariant denotes V175M DBSNP:rs7946
2147 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD MESH:D065626

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-93 Sentence denotes Polymorphism of the PEMT gene and susceptibility to nonalcoholic fatty liver disease (NAFLD).
T2 94-186 Sentence denotes Phosphatidylethanolamine N-methyltransferase (PEMT) catalyzes phosphatidylcholine synthesis.
T3 187-351 Sentence denotes PEMT knockout mice have fatty livers, and it is possible that, in humans, nonalcoholic fatty liver disease (NAFLD) might be associated with PEMT gene polymorphisms.
T4 352-536 Sentence denotes DNA samples from 59 humans without fatty liver and from 28 humans with NAFLD were genotyped for a single nucleotide polymorphism in exon 8 of PEMT, which leads to a V175M substitution.
T5 537-711 Sentence denotes V175M is a loss of function mutation, as determined by transiently transfecting McArdle-RH7777 cells with constructs of wild-type PEMT open reading frame or the V175M mutant.
T6 712-845 Sentence denotes Met/Met at residue 175 (loss of function SNP) occurred in 67.9% of the NAFLD subjects and in only 40.7% of control subjects (P<0.03).
T7 846-1004 Sentence denotes For the first time we report that a polymorphism of the human PEMT gene (V175M) is associated with diminished activity and may confer susceptibility to NAFLD.

LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 201-205 OrganismTaxon denotes mice NCBItxid:10095|NCBItxid:10088
T3 253-259 OrganismTaxon denotes humans NCBItxid:9605
T4 372-378 OrganismTaxon denotes humans NCBItxid:9605
T5 411-417 OrganismTaxon denotes humans NCBItxid:9605
T6 902-907 OrganismTaxon denotes human NCBItxid:9606

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease 0013209
T2 65-84 DiseaseOrPhenotypicFeature denotes fatty liver disease 0004790
T3 71-84 DiseaseOrPhenotypicFeature denotes liver disease 0005154
T4 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease 0013209
T5 274-293 DiseaseOrPhenotypicFeature denotes fatty liver disease 0004790
T6 280-293 DiseaseOrPhenotypicFeature denotes liver disease 0005154

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 517-522 SequenceVariant denotes V175M
T2 537-542 SequenceVariant denotes V175M
T3 698-703 SequenceVariant denotes V175M
T4 919-924 SequenceVariant denotes V175M

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 65-70 GeneOrGeneProduct denotes fatty
T3 71-76 GeneOrGeneProduct denotes liver
T4 86-91 GeneOrGeneProduct denotes NAFLD
T5 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T6 140-144 GeneOrGeneProduct denotes PEMT
T7 156-175 GeneOrGeneProduct denotes phosphatidylcholine
T8 187-191 GeneOrGeneProduct denotes PEMT
T9 192-200 GeneOrGeneProduct denotes knockout
T10 201-205 GeneOrGeneProduct denotes mice
T11 211-216 GeneOrGeneProduct denotes fatty
T12 217-223 GeneOrGeneProduct denotes livers
T13 274-279 GeneOrGeneProduct denotes fatty
T14 280-285 GeneOrGeneProduct denotes liver
T15 295-300 GeneOrGeneProduct denotes NAFLD
T16 327-331 GeneOrGeneProduct denotes PEMT
T17 387-392 GeneOrGeneProduct denotes fatty
T18 393-398 GeneOrGeneProduct denotes liver
T19 423-428 GeneOrGeneProduct denotes NAFLD
T20 494-498 GeneOrGeneProduct denotes PEMT
T21 565-573 GeneOrGeneProduct denotes mutation
T22 578-588 GeneOrGeneProduct denotes determined
T23 632-637 GeneOrGeneProduct denotes cells
T24 667-671 GeneOrGeneProduct denotes PEMT
T25 672-690 GeneOrGeneProduct denotes open reading frame
T26 704-710 GeneOrGeneProduct denotes mutant
T27 712-715 GeneOrGeneProduct denotes Met
T28 716-719 GeneOrGeneProduct denotes Met
T29 783-788 GeneOrGeneProduct denotes NAFLD
T30 860-864 GeneOrGeneProduct denotes time
T31 908-912 GeneOrGeneProduct denotes PEMT
T32 956-964 GeneOrGeneProduct denotes activity
T33 998-1003 GeneOrGeneProduct denotes NAFLD

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 71-76 GeneOrGeneProduct denotes liver
T3 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T4 140-144 GeneOrGeneProduct denotes PEMT
T5 156-175 GeneOrGeneProduct denotes phosphatidylcholine
T6 187-191 GeneOrGeneProduct denotes PEMT
T7 192-200 GeneOrGeneProduct denotes knockout
T8 280-285 GeneOrGeneProduct denotes liver
T9 327-331 GeneOrGeneProduct denotes PEMT
T10 393-398 GeneOrGeneProduct denotes liver
T11 494-498 GeneOrGeneProduct denotes PEMT
T12 667-671 GeneOrGeneProduct denotes PEMT
T13 672-690 GeneOrGeneProduct denotes open reading frame
T14 704-710 GeneOrGeneProduct denotes mutant
T15 908-912 GeneOrGeneProduct denotes PEMT

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T2 86-91 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T3 211-223 DiseaseOrPhenotypicFeature denotes fatty livers D005234
T4 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T5 295-300 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T6 387-398 DiseaseOrPhenotypicFeature denotes fatty liver D005234
T7 423-428 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T8 783-788 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T9 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD D065626

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T3 140-144 GeneOrGeneProduct denotes PEMT
T4 156-175 GeneOrGeneProduct denotes phosphatidylcholine
T5 187-191 GeneOrGeneProduct denotes PEMT
T6 327-331 GeneOrGeneProduct denotes PEMT
T7 494-498 GeneOrGeneProduct denotes PEMT
T8 667-671 GeneOrGeneProduct denotes PEMT
T9 908-912 GeneOrGeneProduct denotes PEMT

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease 0013209
T2 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease 0013209
T3 387-398 DiseaseOrPhenotypicFeature denotes fatty liver 0004790

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T2 86-91 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T3 211-223 DiseaseOrPhenotypicFeature denotes fatty livers D005234
T4 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T5 295-300 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T6 387-398 DiseaseOrPhenotypicFeature denotes fatty liver D005234
T7 423-428 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T8 783-788 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T9 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD D065626

LitCoin_CellLine

Id Subject Object Predicate Lexical cue cellosaurus_accession_id
T1 625-631 CellLine denotes RH7777 CVCL_0444

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T2 86-91 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T3 211-223 DiseaseOrPhenotypicFeature denotes fatty livers D005234
T4 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T5 295-300 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T6 387-398 DiseaseOrPhenotypicFeature denotes fatty liver D005234
T7 423-428 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T8 783-788 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T9 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD D065626

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 20-24 ChemicalEntity denotes PEMT D050918
T2 94-138 ChemicalEntity denotes Phosphatidylethanolamine N-methyltransferase D050918
T3 140-144 ChemicalEntity denotes PEMT D050918
T4 156-175 ChemicalEntity denotes phosphatidylcholine D010713|http://purl.obolibrary.org/obo/CHEBI_64482
T6 187-191 ChemicalEntity denotes PEMT D050918
T7 327-331 ChemicalEntity denotes PEMT D050918
T8 494-498 ChemicalEntity denotes PEMT D050918
T9 667-671 ChemicalEntity denotes PEMT D050918
T10 712-715 ChemicalEntity denotes Met http://purl.obolibrary.org/obo/CHEBI_16811|http://purl.obolibrary.org/obo/CHEBI_16643|http://purl.obolibrary.org/obo/CHEBI_16044
T13 716-719 ChemicalEntity denotes Met http://purl.obolibrary.org/obo/CHEBI_16811|http://purl.obolibrary.org/obo/CHEBI_16643|http://purl.obolibrary.org/obo/CHEBI_16044
T16 908-912 ChemicalEntity denotes PEMT D050918

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 201-205 OrganismTaxon denotes mice
T2 253-259 OrganismTaxon denotes humans
T3 372-378 OrganismTaxon denotes humans
T4 411-417 OrganismTaxon denotes humans
T5 902-907 OrganismTaxon denotes human

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID: cellosaurus_accession_id
T1 625-631 CellLine denotes RH7777 CVCL_0444
T16 908-912 ChemicalEntity denotes PEMT D050918
T13 716-719 ChemicalEntity denotes Met http://purl.obolibrary.org/obo/CHEBI_16044|http://purl.obolibrary.org/obo/CHEBI_16643|http://purl.obolibrary.org/obo/CHEBI_16811
T10 712-715 ChemicalEntity denotes Met http://purl.obolibrary.org/obo/CHEBI_16044|http://purl.obolibrary.org/obo/CHEBI_16643|http://purl.obolibrary.org/obo/CHEBI_16811
T9 667-671 ChemicalEntity denotes PEMT D050918
T8 494-498 ChemicalEntity denotes PEMT D050918
T7 327-331 ChemicalEntity denotes PEMT D050918
T6 187-191 ChemicalEntity denotes PEMT D050918
T4 156-175 ChemicalEntity denotes phosphatidylcholine http://purl.obolibrary.org/obo/CHEBI_64482|D010713
T3 140-144 ChemicalEntity denotes PEMT D050918
T2 94-138 ChemicalEntity denotes Phosphatidylethanolamine N-methyltransferase D050918
T88793 20-24 ChemicalEntity denotes PEMT D050918
T69747 908-912 GeneOrGeneProduct denotes PEMT
T70306 667-671 GeneOrGeneProduct denotes PEMT
T94340 494-498 GeneOrGeneProduct denotes PEMT
T71315 327-331 GeneOrGeneProduct denotes PEMT
T5 187-191 GeneOrGeneProduct denotes PEMT
T14663 156-175 GeneOrGeneProduct denotes phosphatidylcholine
T4751 140-144 GeneOrGeneProduct denotes PEMT
T86471 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T97178 20-24 GeneOrGeneProduct denotes PEMT
T75797 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T93621 783-788 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T13647 423-428 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T2405 387-398 DiseaseOrPhenotypicFeature denotes fatty liver D005234
T37889 295-300 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T24452 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T96980 211-223 DiseaseOrPhenotypicFeature denotes fatty livers D005234
T51359 86-91 DiseaseOrPhenotypicFeature denotes NAFLD D065626
T12075 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease D065626
T46570 902-907 OrganismTaxon denotes human
T31964 411-417 OrganismTaxon denotes humans
T35247 372-378 OrganismTaxon denotes humans
T31149 253-259 OrganismTaxon denotes humans
T683 201-205 OrganismTaxon denotes mice
T50715 919-924 SequenceVariant denotes V175M
T46439 698-703 SequenceVariant denotes V175M
T83685 537-542 SequenceVariant denotes V175M
T30596 517-522 SequenceVariant denotes V175M

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
16051693-6#73#78#geners7946 919-924 geners7946 denotes V175M
16051693-6#152#157#diseaseC0400966 998-1003 diseaseC0400966 denotes NAFLD
73#78#geners7946152#157#diseaseC0400966 16051693-6#73#78#geners7946 16051693-6#152#157#diseaseC0400966 associated_with V175M,NAFLD

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
16051693-0#20#24#gene10400 20-24 gene10400 denotes PEMT
16051693-0#52#84#diseaseC0400966 52-84 diseaseC0400966 denotes nonalcoholic fatty liver disease
16051693-0#86#91#diseaseC0400966 86-91 diseaseC0400966 denotes NAFLD
16051693-3#142#146#gene10400 494-498 gene10400 denotes PEMT
16051693-3#35#46#diseaseC0015695 387-398 diseaseC0015695 denotes fatty liver
16051693-3#35#46#diseaseC2711227 387-398 diseaseC2711227 denotes fatty liver
20#24#gene1040052#84#diseaseC0400966 16051693-0#20#24#gene10400 16051693-0#52#84#diseaseC0400966 associated_with PEMT,nonalcoholic fatty liver disease
20#24#gene1040086#91#diseaseC0400966 16051693-0#20#24#gene10400 16051693-0#86#91#diseaseC0400966 associated_with PEMT,NAFLD
142#146#gene1040035#46#diseaseC0015695 16051693-3#142#146#gene10400 16051693-3#35#46#diseaseC0015695 associated_with PEMT,fatty liver
142#146#gene1040035#46#diseaseC2711227 16051693-3#142#146#gene10400 16051693-3#35#46#diseaseC2711227 associated_with PEMT,fatty liver

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 517-522 ProteinMutation:p|SUB|V|175|M denotes V175M
T2 537-542 ProteinMutation:p|SUB|V|175|M denotes V175M
T3 698-703 ProteinMutation:p|SUB|V|175|M denotes V175M
T4 919-924 ProteinMutation:p|SUB|V|175|M denotes V175M

DisGeNET

Id Subject Object Predicate Lexical cue
T0 187-191 gene:10400 denotes PEMT
T1 211-223 disease:C0015695 denotes fatty livers
T2 187-191 gene:4582 denotes PEMT
T3 211-223 disease:C0015695 denotes fatty livers
T4 187-191 gene:10400 denotes PEMT
T5 295-300 disease:C0400966 denotes NAFLD
T6 187-191 gene:4582 denotes PEMT
T7 295-300 disease:C0400966 denotes NAFLD
T8 327-331 gene:10400 denotes PEMT
T9 211-223 disease:C0015695 denotes fatty livers
T10 327-331 gene:10400 denotes PEMT
T11 295-300 disease:C0400966 denotes NAFLD
T12 327-331 gene:10400 denotes PEMT
T13 261-293 disease:C0400966 denotes nonalcoholic fatty liver disease
T14 494-498 gene:10400 denotes PEMT
T15 387-398 disease:C0015695 denotes fatty liver
T16 494-498 gene:10400 denotes PEMT
T17 423-428 disease:C0400966 denotes NAFLD
T18 908-912 gene:10400 denotes PEMT
T19 998-1003 disease:C0400966 denotes NAFLD
T20 919-924 gene:10400 denotes V175M
T21 998-1003 disease:C0400966 denotes NAFLD
R1 T0 T1 associated_with PEMT,fatty livers
R2 T2 T3 associated_with PEMT,fatty livers
R3 T4 T5 associated_with PEMT,NAFLD
R4 T6 T7 associated_with PEMT,NAFLD
R5 T8 T9 associated_with PEMT,fatty livers
R6 T10 T11 associated_with PEMT,NAFLD
R7 T12 T13 associated_with PEMT,nonalcoholic fatty liver disease
R8 T14 T15 associated_with PEMT,fatty liver
R9 T16 T17 associated_with PEMT,NAFLD
R10 T18 T19 associated_with PEMT,NAFLD
R11 T20 T21 associated_with V175M,NAFLD

biored-valid-deepseek-nr-ng

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-92 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T3 94-145 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase (PEMT)
T4 187-191 GeneOrGeneProduct denotes PEMT
T5 261-301 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T6 327-331 GeneOrGeneProduct denotes PEMT
T7 494-498 GeneOrGeneProduct denotes PEMT
T8 517-522 SequenceVariant denotes V175M
T9 667-671 GeneOrGeneProduct denotes PEMT
T10 698-703 SequenceVariant denotes V175M
T11 712-715 SequenceVariant denotes Met
T12 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T13 908-912 GeneOrGeneProduct denotes PEMT
T14 919-924 SequenceVariant denotes V175M

biored-valid

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 187-191 GeneOrGeneProduct denotes PEMT
T8 201-205 OrganismTaxon denotes mice
T9 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T10 253-259 OrganismTaxon denotes humans
T11 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T12 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T13 327-331 GeneOrGeneProduct denotes PEMT
T14 372-378 OrganismTaxon denotes humans
T15 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T16 411-417 OrganismTaxon denotes humans
T17 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T18 494-498 GeneOrGeneProduct denotes PEMT
T19 517-522 SequenceVariant denotes V175M
T20 537-542 SequenceVariant denotes V175M
T21 617-631 CellLine denotes McArdle-RH7777
T22 667-671 GeneOrGeneProduct denotes PEMT
T23 698-703 SequenceVariant denotes V175M
T24 712-734 SequenceVariant denotes Met/Met at residue 175
T25 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T26 902-907 OrganismTaxon denotes human
T27 908-912 GeneOrGeneProduct denotes PEMT
T28 919-924 SequenceVariant denotes V175M
T29 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-deepseek-nr-g

Id Subject Object Predicate Lexical cue
T1 20-29 GeneOrGeneProduct denotes PEMT gene
T2 52-92 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T3 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T4 140-144 GeneOrGeneProduct denotes PEMT
T5 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T6 261-301 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T7 327-331 GeneOrGeneProduct denotes PEMT
T8 332-336 GeneOrGeneProduct denotes gene
T9 352-355 ChemicalEntity denotes DNA
T10 372-378 OrganismTaxon denotes humans
T11 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T12 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T13 494-498 GeneOrGeneProduct denotes PEMT
T14 517-522 SequenceVariant denotes V175M
T15 667-671 GeneOrGeneProduct denotes PEMT
T16 698-703 SequenceVariant denotes V175M
T17 712-715 SequenceVariant denotes Met
T18 753-756 SequenceVariant denotes SNP
T19 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T20 913-917 GeneOrGeneProduct denotes gene

biored-valid-deepseek-r-ng

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 140-144 GeneOrGeneProduct denotes PEMT
T5 156-175 ChemicalEntity denotes phosphatidylcholine
T6 201-205 OrganismTaxon denotes mice
T7 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T8 253-259 OrganismTaxon denotes humans
T9 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T10 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T11 327-331 GeneOrGeneProduct denotes PEMT
T12 411-417 OrganismTaxon denotes humans
T13 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T14 517-522 SequenceVariant denotes V175M
T15 617-637 CellLine denotes McArdle-RH7777 cells

biored-valid-deepseek-r-g

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 201-205 OrganismTaxon denotes mice
T8 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T9 253-259 OrganismTaxon denotes humans
T10 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T11 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T12 327-331 GeneOrGeneProduct denotes PEMT
T13 411-416 OrganismTaxon denotes human
T14 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T15 494-498 GeneOrGeneProduct denotes PEMT
T16 517-522 SequenceVariant denotes V175M
T17 617-637 CellLine denotes McArdle-RH7777 cells

biored-valid-gemini-nr-ng

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T8 253-259 OrganismTaxon denotes humans
T9 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T10 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T11 327-331 GeneOrGeneProduct denotes PEMT
T12 352-355 ChemicalEntity denotes DNA
T13 372-378 OrganismTaxon denotes humans
T14 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T15 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T16 494-498 GeneOrGeneProduct denotes PEMT
T17 517-522 SequenceVariant denotes V175M
T18 548-573 DiseaseOrPhenotypicFeature denotes loss of function mutation
T19 617-631 CellLine denotes McArdle-RH7777
T20 667-671 GeneOrGeneProduct denotes PEMT
T21 698-703 SequenceVariant denotes V175M
T22 712-719 SequenceVariant denotes Met/Met
T23 736-756 DiseaseOrPhenotypicFeature denotes loss of function SNP
T24 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T25 902-907 OrganismTaxon denotes human
T26 908-912 GeneOrGeneProduct denotes PEMT
T27 919-924 SequenceVariant denotes V175M
T28 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-gemini-r-ng

Id Subject Object Predicate Lexical cue
T1 20-29 GeneOrGeneProduct denotes PEMT gene
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 201-205 OrganismTaxon denotes mice
T8 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T9 253-259 OrganismTaxon denotes humans
T10 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T11 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T12 327-336 GeneOrGeneProduct denotes PEMT gene
T13 352-355 ChemicalEntity denotes DNA
T14 372-378 OrganismTaxon denotes humans
T15 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T16 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T17 450-480 SequenceVariant denotes single nucleotide polymorphism
T18 494-498 GeneOrGeneProduct denotes PEMT
T19 517-535 SequenceVariant denotes V175M substitution
T20 548-573 DiseaseOrPhenotypicFeature denotes loss of function mutation
T21 617-637 CellLine denotes McArdle-RH7777 cells
T22 667-671 GeneOrGeneProduct denotes PEMT
T23 698-703 SequenceVariant denotes V175M
T24 712-719 SequenceVariant denotes Met/Met
T25 736-752 DiseaseOrPhenotypicFeature denotes loss of function
T26 753-756 SequenceVariant denotes SNP
T27 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T28 902-907 OrganismTaxon denotes human
T29 908-917 GeneOrGeneProduct denotes PEMT gene
T30 919-924 SequenceVariant denotes V175M
T31 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-gemini-r-g

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 201-205 OrganismTaxon denotes mice
T8 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T9 253-259 OrganismTaxon denotes humans
T10 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T11 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T12 327-331 GeneOrGeneProduct denotes PEMT
T13 352-355 ChemicalEntity denotes DNA
T14 372-378 OrganismTaxon denotes humans
T15 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T16 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T17 494-498 GeneOrGeneProduct denotes PEMT
T18 517-522 SequenceVariant denotes V175M
T19 617-631 CellLine denotes McArdle-RH7777
T20 667-671 GeneOrGeneProduct denotes PEMT
T21 698-703 SequenceVariant denotes V175M
T22 712-719 SequenceVariant denotes Met/Met
T23 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T24 902-907 OrganismTaxon denotes human

biored-valid-gpt-nr-ng

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-92 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T3 94-118 ChemicalEntity denotes Phosphatidylethanolamine
T4 140-144 GeneOrGeneProduct denotes PEMT
T5 156-175 ChemicalEntity denotes phosphatidylcholine
T6 201-205 OrganismTaxon denotes mice
T7 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T8 253-259 OrganismTaxon denotes humans
T9 261-301 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T10 327-331 GeneOrGeneProduct denotes PEMT
T11 352-355 ChemicalEntity denotes DNA
T12 372-378 OrganismTaxon denotes humans
T13 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T14 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T15 494-498 GeneOrGeneProduct denotes PEMT
T16 517-522 SequenceVariant denotes V175M
T17 617-631 CellLine denotes McArdle-RH7777
T18 667-671 GeneOrGeneProduct denotes PEMT
T19 698-703 SequenceVariant denotes V175M
T20 712-719 SequenceVariant denotes Met/Met
T21 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T22 902-907 OrganismTaxon denotes human
T23 908-912 GeneOrGeneProduct denotes PEMT
T24 919-924 SequenceVariant denotes V175M
T25 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-gpt-nr-g

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 201-205 OrganismTaxon denotes mice
T8 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T9 253-259 OrganismTaxon denotes humans
T10 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T11 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T12 327-331 GeneOrGeneProduct denotes PEMT
T13 352-355 ChemicalEntity denotes DNA
T14 372-378 OrganismTaxon denotes humans
T15 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T16 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T17 450-480 SequenceVariant denotes single nucleotide polymorphism
T18 494-498 GeneOrGeneProduct denotes PEMT
T19 517-522 SequenceVariant denotes V175M
T20 617-637 CellLine denotes McArdle-RH7777 cells
T21 667-671 GeneOrGeneProduct denotes PEMT
T22 698-703 SequenceVariant denotes V175M
T23 712-719 SequenceVariant denotes Met/Met
T24 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T25 902-907 OrganismTaxon denotes human
T26 908-912 GeneOrGeneProduct denotes PEMT
T27 919-924 SequenceVariant denotes V175M
T28 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-gpt-r-ng

Id Subject Object Predicate Lexical cue
T1 20-29 GeneOrGeneProduct denotes PEMT gene
T2 52-92 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T3 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T4 140-144 GeneOrGeneProduct denotes PEMT
T5 156-175 ChemicalEntity denotes phosphatidylcholine
T6 201-205 OrganismTaxon denotes mice
T7 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T8 253-259 OrganismTaxon denotes humans
T9 261-301 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T10 327-336 GeneOrGeneProduct denotes PEMT gene
T11 352-355 ChemicalEntity denotes DNA
T12 372-378 OrganismTaxon denotes humans
T13 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T14 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T15 450-480 SequenceVariant denotes single nucleotide polymorphism
T16 494-498 GeneOrGeneProduct denotes PEMT
T17 517-522 SequenceVariant denotes V175M
T18 548-573 SequenceVariant denotes loss of function mutation
T19 617-637 CellLine denotes McArdle-RH7777 cells
T20 667-671 GeneOrGeneProduct denotes PEMT
T21 698-703 SequenceVariant denotes V175M
T22 712-719 SequenceVariant denotes Met/Met
T23 753-756 SequenceVariant denotes SNP
T24 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T25 902-907 OrganismTaxon denotes human
T26 908-917 GeneOrGeneProduct denotes PEMT gene
T27 919-924 SequenceVariant denotes V175M
T28 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-gpt-r-g

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 201-205 OrganismTaxon denotes mice
T8 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T9 253-259 OrganismTaxon denotes humans
T10 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T11 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T12 327-331 GeneOrGeneProduct denotes PEMT
T13 352-355 ChemicalEntity denotes DNA
T14 372-378 OrganismTaxon denotes humans
T15 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T16 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T17 494-498 GeneOrGeneProduct denotes PEMT
T18 517-522 SequenceVariant denotes V175M
T19 617-637 CellLine denotes McArdle-RH7777 cells
T20 667-671 GeneOrGeneProduct denotes PEMT
T21 698-703 SequenceVariant denotes V175M
T22 712-719 SequenceVariant denotes Met/Met
T23 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T24 902-907 OrganismTaxon denotes human
T25 908-912 GeneOrGeneProduct denotes PEMT
T26 919-924 SequenceVariant denotes V175M
T27 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-gemini-nr-g

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 187-191 GeneOrGeneProduct denotes PEMT
T8 201-205 OrganismTaxon denotes mice
T9 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T10 253-259 OrganismTaxon denotes humans
T11 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T12 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T13 327-331 GeneOrGeneProduct denotes PEMT
T14 352-355 ChemicalEntity denotes DNA
T15 372-378 OrganismTaxon denotes humans
T16 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T17 411-417 OrganismTaxon denotes humans
T18 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T19 494-498 GeneOrGeneProduct denotes PEMT
T20 517-522 SequenceVariant denotes V175M
T21 617-631 CellLine denotes McArdle-RH7777
T22 667-671 GeneOrGeneProduct denotes PEMT
T23 698-703 SequenceVariant denotes V175M
T24 704-710 SequenceVariant denotes mutant
T25 712-719 SequenceVariant denotes Met/Met
T26 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T27 902-907 OrganismTaxon denotes human
T28 908-912 GeneOrGeneProduct denotes PEMT
T29 919-924 SequenceVariant denotes V175M

biored-valid-gpt-r-m

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 187-191 GeneOrGeneProduct denotes PEMT
T8 201-205 OrganismTaxon denotes mice
T9 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T10 253-259 OrganismTaxon denotes humans
T11 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T12 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T13 327-331 GeneOrGeneProduct denotes PEMT
T14 352-355 ChemicalEntity denotes DNA
T15 372-378 OrganismTaxon denotes humans
T16 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T17 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T18 494-498 GeneOrGeneProduct denotes PEMT
T19 517-522 SequenceVariant denotes V175M
T20 617-637 CellLine denotes McArdle-RH7777 cells
T21 667-671 GeneOrGeneProduct denotes PEMT
T22 698-703 SequenceVariant denotes V175M
T23 712-719 SequenceVariant denotes Met/Met
T24 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T25 789-797 OrganismTaxon denotes subjects
T26 902-907 OrganismTaxon denotes human
T27 908-912 GeneOrGeneProduct denotes PEMT
T28 919-924 SequenceVariant denotes V175M
T29 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-gemini-r-m

Id Subject Object Predicate Lexical cue
T1 20-24 GeneOrGeneProduct denotes PEMT
T2 52-92 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T3 94-145 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase (PEMT)
T4 156-175 ChemicalEntity denotes phosphatidylcholine
T5 201-205 OrganismTaxon denotes mice
T6 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T7 253-259 OrganismTaxon denotes humans
T8 261-301 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease (NAFLD)
T9 327-331 GeneOrGeneProduct denotes PEMT
T10 372-378 OrganismTaxon denotes humans
T11 387-398 DiseaseOrPhenotypicFeature denotes fatty liver
T12 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T13 494-498 GeneOrGeneProduct denotes PEMT
T14 517-522 SequenceVariant denotes V175M
T15 617-637 CellLine denotes McArdle-RH7777 cells
T16 667-671 GeneOrGeneProduct denotes PEMT
T17 698-703 SequenceVariant denotes V175M
T18 783-788 DiseaseOrPhenotypicFeature denotes NAFLD
T19 789-797 OrganismTaxon denotes subjects
T20 819-835 OrganismTaxon denotes control subjects
T21 902-907 OrganismTaxon denotes human
T22 908-912 GeneOrGeneProduct denotes PEMT
T23 919-924 SequenceVariant denotes V175M
T24 998-1003 DiseaseOrPhenotypicFeature denotes NAFLD

biored-valid-deepseek-r-m

Id Subject Object Predicate Lexical cue
T1 20-29 GeneOrGeneProduct denotes PEMT gene
T2 52-84 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T3 86-91 DiseaseOrPhenotypicFeature denotes NAFLD
T4 94-138 GeneOrGeneProduct denotes Phosphatidylethanolamine N-methyltransferase
T5 140-144 GeneOrGeneProduct denotes PEMT
T6 156-175 ChemicalEntity denotes phosphatidylcholine
T7 201-205 OrganismTaxon denotes mice
T8 211-223 DiseaseOrPhenotypicFeature denotes fatty livers
T9 253-259 OrganismTaxon denotes humans
T10 261-293 DiseaseOrPhenotypicFeature denotes nonalcoholic fatty liver disease
T11 295-300 DiseaseOrPhenotypicFeature denotes NAFLD
T12 327-336 GeneOrGeneProduct denotes PEMT gene
T13 372-378 OrganismTaxon denotes humans
T14 411-416 OrganismTaxon denotes human
T15 423-428 DiseaseOrPhenotypicFeature denotes NAFLD
T16 494-498 GeneOrGeneProduct denotes PEMT
T17 517-522 SequenceVariant denotes V175M
T18 617-637 CellLine denotes McArdle-RH7777 cells