
PubMed:16046395 / 223-456
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/16046395","sourcedb":"PubMed","sourceid":"16046395","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/16046395","text":"Genetic variants of OPRM1 have been implicated in predisposition to drug addiction, in particular the single nucleotide polymorphism A118G, leading to an N40D substitution, with an allele frequency of 10-32%, and uncertain functions.","tracks":[{"project":"PubTator4TogoVar","denotations":[{"id":"16046395_0","span":{"begin":154,"end":158},"obj":"ProteinMutation"}],"attributes":[{"id":"16046395_0_ProteinMutation","pred":"proteinmutation","subj":"16046395_0","obj":"rs1799971"},{"subj":"16046395_0","pred":"source","obj":"PubTator4TogoVar"}]},{"project":"LitCoin-sentences","denotations":[{"id":"T3","span":{"begin":0,"end":233},"obj":"Sentence"}],"attributes":[{"subj":"T3","pred":"source","obj":"LitCoin-sentences"}]},{"project":"LitCoin-entities","denotations":[{"id":"2098","span":{"begin":20,"end":25},"obj":"GeneOrGeneProduct"},{"id":"2099","span":{"begin":68,"end":82},"obj":"DiseaseOrPhenotypicFeature"},{"id":"2100","span":{"begin":133,"end":138},"obj":"SequenceVariant"},{"id":"2101","span":{"begin":154,"end":158},"obj":"SequenceVariant"}],"attributes":[{"id":"A8","pred":"db_id","subj":"2098","obj":"NCBIGene:4988"},{"id":"A9","pred":"db_id","subj":"2099","obj":"MESH:D019966"},{"id":"A10","pred":"db_id","subj":"2100","obj":"DBSNP:rs1799971"},{"id":"A11","pred":"db_id","subj":"2101","obj":"DBSNP:rs1799971"},{"subj":"2098","pred":"source","obj":"LitCoin-entities"},{"subj":"2099","pred":"source","obj":"LitCoin-entities"},{"subj":"2100","pred":"source","obj":"LitCoin-entities"},{"subj":"2101","pred":"source","obj":"LitCoin-entities"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}]},{"project":"LitCoin-SeqVar","denotations":[{"id":"T2","span":{"begin":133,"end":138},"obj":"SequenceVariant"},{"id":"T3","span":{"begin":154,"end":158},"obj":"SequenceVariant"}],"attributes":[{"subj":"T2","pred":"source","obj":"LitCoin-SeqVar"},{"subj":"T3","pred":"source","obj":"LitCoin-SeqVar"}]},{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T6","span":{"begin":20,"end":25},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":188,"end":197},"obj":"GeneOrGeneProduct"}],"attributes":[{"subj":"T6","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v0"},{"subj":"T7","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v0"}]},{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T6","span":{"begin":20,"end":25},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":188,"end":197},"obj":"GeneOrGeneProduct"}],"attributes":[{"subj":"T6","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v2"},{"subj":"T7","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v2"}]},{"project":"LitCoin-Disease-MeSH","denotations":[{"id":"T2","span":{"begin":68,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A2","pred":"originalLabel","subj":"T2","obj":"D019966"},{"subj":"T2","pred":"source","obj":"LitCoin-Disease-MeSH"}]},{"project":"LitCoin-GeneOrGeneProduct-v3","denotations":[{"id":"T5","span":{"begin":20,"end":25},"obj":"GeneOrGeneProduct"}],"attributes":[{"subj":"T5","pred":"source","obj":"LitCoin-GeneOrGeneProduct-v3"}]},{"project":"LitCoin-MeSH-Disease-2","denotations":[{"id":"T2","span":{"begin":68,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A2","pred":"ID:","subj":"T2","obj":"D019966"},{"subj":"T2","pred":"source","obj":"LitCoin-MeSH-Disease-2"}]},{"project":"LitCoin-MONDO_bioort2019","denotations":[{"id":"T2","span":{"begin":68,"end":82},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A2","pred":"#label","subj":"T2","obj":"D019966"},{"subj":"T2","pred":"source","obj":"LitCoin-MONDO_bioort2019"}]},{"project":"LitCoin-training-merged","denotations":[{"id":"T69329","span":{"begin":20,"end":25},"obj":"GeneOrGeneProduct"},{"id":"T54283","span":{"begin":68,"end":82},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T98893","span":{"begin":154,"end":158},"obj":"SequenceVariant"},{"id":"T65631","span":{"begin":133,"end":138},"obj":"SequenceVariant"}],"attributes":[{"id":"A13239","pred":"#label","subj":"T54283","obj":"D019966"},{"subj":"T69329","pred":"source","obj":"LitCoin-training-merged"},{"subj":"T54283","pred":"source","obj":"LitCoin-training-merged"},{"subj":"T98893","pred":"source","obj":"LitCoin-training-merged"},{"subj":"T65631","pred":"source","obj":"LitCoin-training-merged"}]},{"project":"sentences","denotations":[{"id":"T3","span":{"begin":0,"end":233},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T3","pred":"source","obj":"sentences"}]},{"project":"DisGeNET5_variant_disease","denotations":[{"id":"16046395-2#133#138#geners1799971","span":{"begin":133,"end":138},"obj":"geners1799971"},{"id":"16046395-2#68#82#diseaseC1510472","span":{"begin":68,"end":82},"obj":"diseaseC1510472"}],"relations":[{"id":"133#138#geners179997168#82#diseaseC1510472","pred":"associated_with","subj":"16046395-2#133#138#geners1799971","obj":"16046395-2#68#82#diseaseC1510472"}],"attributes":[{"subj":"16046395-2#133#138#geners1799971","pred":"source","obj":"DisGeNET5_variant_disease"},{"subj":"16046395-2#68#82#diseaseC1510472","pred":"source","obj":"DisGeNET5_variant_disease"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"16046395-2#20#25#gene4988","span":{"begin":20,"end":25},"obj":"gene4988"},{"id":"16046395-2#68#82#diseaseC1510472","span":{"begin":68,"end":82},"obj":"diseaseC1510472"}],"relations":[{"id":"20#25#gene498868#82#diseaseC1510472","pred":"associated_with","subj":"16046395-2#20#25#gene4988","obj":"16046395-2#68#82#diseaseC1510472"}],"attributes":[{"subj":"16046395-2#20#25#gene4988","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"16046395-2#68#82#diseaseC1510472","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"tmVarCorpus","denotations":[{"id":"T2","span":{"begin":133,"end":138},"obj":"DNAMutation:c|SUB|A|118|G"},{"id":"T3","span":{"begin":154,"end":158},"obj":"ProteinMutation:p|SUB|N|40|D"}],"attributes":[{"subj":"T2","pred":"source","obj":"tmVarCorpus"},{"subj":"T3","pred":"source","obj":"tmVarCorpus"}]},{"project":"DisGeNET","denotations":[{"id":"T4","span":{"begin":20,"end":25},"obj":"gene:4988"},{"id":"T5","span":{"begin":68,"end":82},"obj":"disease:C1510472"},{"id":"T6","span":{"begin":20,"end":25},"obj":"gene:4988"},{"id":"T7","span":{"begin":68,"end":82},"obj":"disease:C0038580"}],"relations":[{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"},{"id":"R4","pred":"associated_with","subj":"T6","obj":"T7"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T4","pred":"source","obj":"DisGeNET"},{"subj":"T5","pred":"source","obj":"DisGeNET"},{"subj":"T6","pred":"source","obj":"DisGeNET"},{"subj":"T7","pred":"source","obj":"DisGeNET"}]},{"project":"HP-phenotype","denotations":[{"id":"T2","span":{"begin":68,"end":82},"obj":"Phenotype"}],"attributes":[{"id":"A2","pred":"hp_id","subj":"T2","obj":"HP:0033511"},{"subj":"T2","pred":"source","obj":"HP-phenotype"}],"namespaces":[{"prefix":"HP","uri":"http://purl.obolibrary.org/obo/HP_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"PubTator4TogoVar","color":"#ec93c2","default":true},{"id":"LitCoin-sentences","color":"#93dcec"},{"id":"LitCoin-entities","color":"#ece293"},{"id":"LitCoin-SeqVar","color":"#c893ec"},{"id":"LitCoin-GeneOrGeneProduct-v0","color":"#93ecae"},{"id":"LitCoin-GeneOrGeneProduct-v2","color":"#ec9493"},{"id":"LitCoin-Disease-MeSH","color":"#93acec"},{"id":"LitCoin-GeneOrGeneProduct-v3","color":"#c6ec93"},{"id":"LitCoin-MeSH-Disease-2","color":"#ec93e0"},{"id":"LitCoin-MONDO_bioort2019","color":"#93ecde"},{"id":"LitCoin-training-merged","color":"#ecc493"},{"id":"sentences","color":"#aa93ec"},{"id":"DisGeNET5_variant_disease","color":"#95ec93"},{"id":"DisGeNET5_gene_disease","color":"#ec93af"},{"id":"tmVarCorpus","color":"#93c9ec"},{"id":"DisGeNET","color":"#e4ec93"},{"id":"HP-phenotype","color":"#da93ec"}]}]}}