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PubMed:16037488 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 150-159 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T2 150-159 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T3 294-303 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T4 294-303 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 150-159 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T3 294-303 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 150-159 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T2 150-159 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T3 294-303 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T4 294-303 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose

GlycoBiology-GDGDB

Id Subject Object Predicate Lexical cue
_T1 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00360 denotes congenital disorders of glycosylation
_T2 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00343 denotes congenital disorders of glycosylation
_T3 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00344 denotes congenital disorders of glycosylation
_T4 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00345 denotes congenital disorders of glycosylation
_T5 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00346 denotes congenital disorders of glycosylation
_T6 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00347 denotes congenital disorders of glycosylation
_T7 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00348 denotes congenital disorders of glycosylation
_T8 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00349 denotes congenital disorders of glycosylation
_T9 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00350 denotes congenital disorders of glycosylation
_T10 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00351 denotes congenital disorders of glycosylation
_T11 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00352 denotes congenital disorders of glycosylation
_T12 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00353 denotes congenital disorders of glycosylation
_T13 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00354 denotes congenital disorders of glycosylation
_T14 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00355 denotes congenital disorders of glycosylation
_T15 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00356 denotes congenital disorders of glycosylation
_T16 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00620 denotes congenital disorders of glycosylation
_T17 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00627 denotes congenital disorders of glycosylation
_T18 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00622 denotes congenital disorders of glycosylation
_T19 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00623 denotes congenital disorders of glycosylation
_T20 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00624 denotes congenital disorders of glycosylation
_T21 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00625 denotes congenital disorders of glycosylation
_T22 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00358 denotes congenital disorders of glycosylation
_T23 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00359 denotes congenital disorders of glycosylation
_T24 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00361 denotes congenital disorders of glycosylation
_T25 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00362 denotes congenital disorders of glycosylation
_T26 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00363 denotes congenital disorders of glycosylation
_T27 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00364 denotes congenital disorders of glycosylation
_T28 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00365 denotes congenital disorders of glycosylation
_T29 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00367 denotes congenital disorders of glycosylation
_T30 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00626 denotes congenital disorders of glycosylation
_T31 233-270 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00621 denotes congenital disorders of glycosylation
_T32 370-376 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00351 denotes CDG-II
_T33 670-675 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00351 denotes CDG-I

uniprot-human

Id Subject Object Predicate Lexical cue
T1 69-80 http://www.uniprot.org/uniprot/P02787 denotes transferrin
T2 554-565 http://www.uniprot.org/uniprot/P02787 denotes transferrin
T3 851-862 http://www.uniprot.org/uniprot/P02787 denotes transferrin
T4 191-195 http://www.uniprot.org/uniprot/Q53XK1 denotes GALT

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 69-80 http://www.uniprot.org/uniprot/Q63915 denotes transferrin
T2 554-565 http://www.uniprot.org/uniprot/Q63915 denotes transferrin
T3 851-862 http://www.uniprot.org/uniprot/Q63915 denotes transferrin

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 383-392 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanism

GO-BP

Id Subject Object Predicate Lexical cue
T1 33-45 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T2 592-604 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylation
T3 257-270 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T4 638-651 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 777-790 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 863-884 http://purl.obolibrary.org/obo/GO_0006487 denotes N-glycan biosynthesis
T7 865-884 http://purl.obolibrary.org/obo/GO_0000271 denotes glycan biosynthesis
T8 872-884 http://purl.obolibrary.org/obo/GO_0009058 denotes biosynthesis

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 63-68 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
T2 548-553 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
16037488-1#252#258#gene7045 370-376 gene7045 denotes CDG-II
16037488-1#10#30#diseaseC0268151 128-148 diseaseC0268151 denotes classic galactosemia
16037488-1#73#89#diseaseC0268151 191-207 diseaseC0268151 denotes GALT] deficiency
16037488-1#115#152#diseaseC0282577 233-270 diseaseC0282577 denotes congenital disorders of glycosylation
16037488-1#154#157#diseaseC0282577 272-275 diseaseC0282577 denotes CDG
252#258#gene704510#30#diseaseC0268151 16037488-1#252#258#gene7045 16037488-1#10#30#diseaseC0268151 associated_with CDG-II,classic galactosemia
252#258#gene704573#89#diseaseC0268151 16037488-1#252#258#gene7045 16037488-1#73#89#diseaseC0268151 associated_with CDG-II,GALT] deficiency
252#258#gene7045115#152#diseaseC0282577 16037488-1#252#258#gene7045 16037488-1#115#152#diseaseC0282577 associated_with CDG-II,congenital disorders of glycosylation
252#258#gene7045154#157#diseaseC0282577 16037488-1#252#258#gene7045 16037488-1#154#157#diseaseC0282577 associated_with CDG-II,CDG

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-117 Sentence denotes Hypoglycosylation with increased fucosylation and branching of serum transferrin N-glycans in untreated galactosemia.
TextSentencer_T2 118-378 Sentence denotes Untreated classic galactosemia (galactose-1-phosphate uridyltransferase [GALT] deficiency) is known as a secondary congenital disorders of glycosylation (CDG) characterized by galactose deficiency of glycoproteins and glycolipids (processing defect or CDG-II).
TextSentencer_T3 379-447 Sentence denotes The mechanism of this undergalactosylation has not been established.
TextSentencer_T4 448-677 Sentence denotes Here we show that in untreated galactosemia, there is also a partial deficiency of whole glycans of serum transferrin associated with increased fucosylation and branching as seen in genetic glycosylation assembly defects (CDG-I).
TextSentencer_T5 678-798 Sentence denotes Thus galactosemia seems to be a secondary "dual" CDG causing a processing as well as an assembly N-glycosylation defect.
TextSentencer_T6 799-920 Sentence denotes We also demonstrated that in galactosemia patients, transferrin N-glycan biosynthesis is restored upon dietary treatment.
T1 0-117 Sentence denotes Hypoglycosylation with increased fucosylation and branching of serum transferrin N-glycans in untreated galactosemia.
T2 118-378 Sentence denotes Untreated classic galactosemia (galactose-1-phosphate uridyltransferase [GALT] deficiency) is known as a secondary congenital disorders of glycosylation (CDG) characterized by galactose deficiency of glycoproteins and glycolipids (processing defect or CDG-II).
T3 379-447 Sentence denotes The mechanism of this undergalactosylation has not been established.
T4 448-677 Sentence denotes Here we show that in untreated galactosemia, there is also a partial deficiency of whole glycans of serum transferrin associated with increased fucosylation and branching as seen in genetic glycosylation assembly defects (CDG-I).
T5 678-798 Sentence denotes Thus galactosemia seems to be a secondary "dual" CDG causing a processing as well as an assembly N-glycosylation defect.
T6 799-920 Sentence denotes We also demonstrated that in galactosemia patients, transferrin N-glycan biosynthesis is restored upon dietary treatment.
T1 0-117 Sentence denotes Hypoglycosylation with increased fucosylation and branching of serum transferrin N-glycans in untreated galactosemia.
T2 118-378 Sentence denotes Untreated classic galactosemia (galactose-1-phosphate uridyltransferase [GALT] deficiency) is known as a secondary congenital disorders of glycosylation (CDG) characterized by galactose deficiency of glycoproteins and glycolipids (processing defect or CDG-II).
T3 379-447 Sentence denotes The mechanism of this undergalactosylation has not been established.
T4 448-677 Sentence denotes Here we show that in untreated galactosemia, there is also a partial deficiency of whole glycans of serum transferrin associated with increased fucosylation and branching as seen in genetic glycosylation assembly defects (CDG-I).
T5 678-798 Sentence denotes Thus galactosemia seems to be a secondary "dual" CDG causing a processing as well as an assembly N-glycosylation defect.
T6 799-920 Sentence denotes We also demonstrated that in galactosemia patients, transferrin N-glycan biosynthesis is restored upon dietary treatment.

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 81-90 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T2 863-871 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycan

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 63-68 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
PD-UBERON-AE-B_T2 548-553 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

DisGeNET

Id Subject Object Predicate Lexical cue
T0 370-376 gene:7045 denotes CDG-II
T1 128-148 disease:C0268151 denotes classic galactosemia
T2 370-376 gene:7045 denotes CDG-II
T3 191-207 disease:C0268151 denotes GALT] deficiency
T4 370-376 gene:7045 denotes CDG-II
T5 233-270 disease:C0282577 denotes congenital disorders of glycosylation
T6 370-376 gene:7045 denotes CDG-II
T7 272-275 disease:C0282577 denotes CDG
R1 T0 T1 associated_with CDG-II,classic galactosemia
R2 T2 T3 associated_with CDG-II,GALT] deficiency
R3 T4 T5 associated_with CDG-II,congenital disorders of glycosylation
R4 T6 T7 associated_with CDG-II,CDG

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 104-116 Phenotype denotes galactosemia HP:0012024
T2 136-148 Phenotype denotes galactosemia HP:0012024
T3 479-491 Phenotype denotes galactosemia HP:0012024
T4 683-695 Phenotype denotes galactosemia HP:0012024
T5 828-840 Phenotype denotes galactosemia HP:0012024

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 104-116 Disease denotes galactosemia http://purl.obolibrary.org/obo/MONDO_0009258|http://purl.obolibrary.org/obo/MONDO_0018116
T3 128-148 Disease denotes classic galactosemia http://purl.obolibrary.org/obo/MONDO_0009258
T4 191-207 Disease denotes GALT] deficiency http://purl.obolibrary.org/obo/MONDO_0009258
T5 233-270 Disease denotes congenital disorders of glycosylation http://purl.obolibrary.org/obo/MONDO_0015286
T6 272-275 Disease denotes CDG http://purl.obolibrary.org/obo/MONDO_0015286
T7 370-376 Disease denotes CDG-II http://purl.obolibrary.org/obo/MONDO_0011933
T8 370-373 Disease denotes CDG http://purl.obolibrary.org/obo/MONDO_0015286
T9 479-491 Disease denotes galactosemia http://purl.obolibrary.org/obo/MONDO_0009258|http://purl.obolibrary.org/obo/MONDO_0018116
T11 670-673 Disease denotes CDG http://purl.obolibrary.org/obo/MONDO_0015286
T12 683-695 Disease denotes galactosemia http://purl.obolibrary.org/obo/MONDO_0009258|http://purl.obolibrary.org/obo/MONDO_0018116
T14 727-730 Disease denotes CDG http://purl.obolibrary.org/obo/MONDO_0015286
T15 828-840 Disease denotes galactosemia http://purl.obolibrary.org/obo/MONDO_0009258|http://purl.obolibrary.org/obo/MONDO_0018116

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 191-195 Body_part denotes GALT http://purl.obolibrary.org/obo/UBERON_0001962