PubMed:15983230 / 696-912
Annnotations
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 0-216 | Sentence | denotes | All four SNPs of SLC2A2 predicted the conversion to diabetes, and rs5393 (AA genotype) increased the risk of type 2 diabetes in the entire study population by threefold (odds ratio 3.04, 95% CI 1.34-6.88, P = 0.008). |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 1983 | 17-23 | GeneOrGeneProduct | denotes | SLC2A2 | NCBIGene:6514 |
| 1984 | 52-60 | DiseaseOrPhenotypicFeature | denotes | diabetes | MESH:D003920 |
| 1985 | 66-72 | SequenceVariant | denotes | rs5393 | DBSNP:rs5393 |
| 1986 | 109-124 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | MESH:D003924 |
LitCoin-SeqVar
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 66-72 | SequenceVariant | denotes | rs5393 |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T30 | 0-3 | GeneOrGeneProduct | denotes | All |
| T31 | 17-23 | GeneOrGeneProduct | denotes | SLC2A2 |
| T32 | 24-33 | GeneOrGeneProduct | denotes | predicted |
| T33 | 52-60 | GeneOrGeneProduct | denotes | diabetes |
| T34 | 109-115 | GeneOrGeneProduct | denotes | type 2 |
| T35 | 116-124 | GeneOrGeneProduct | denotes | diabetes |
| T36 | 132-138 | GeneOrGeneProduct | denotes | entire |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 17-23 | GeneOrGeneProduct | denotes | SLC2A2 |
| T25 | 52-60 | GeneOrGeneProduct | denotes | diabetes |
| T26 | 109-115 | GeneOrGeneProduct | denotes | type 2 |
| T27 | 116-124 | GeneOrGeneProduct | denotes | diabetes |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T10 | 52-60 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T11 | 109-124 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | D003924 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 17-23 | GeneOrGeneProduct | denotes | SLC2A2 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T8 | 52-60 | DiseaseOrPhenotypicFeature | denotes | diabetes | 0005015 |
| T9 | 109-124 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | 0005148 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T11 | 52-60 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T12 | 109-124 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | D003924 |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T11 | 52-60 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T12 | 109-124 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | D003924 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T11 | 17-23 | GeneOrGeneProduct | denotes | SLC2A2 | |
| T80964 | 109-124 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | D003924 |
| T86586 | 52-60 | DiseaseOrPhenotypicFeature | denotes | diabetes | DISEASE |
| T50920 | 66-72 | SequenceVariant | denotes | rs5393 |
DisGeNET5_variant_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 15983230-4#66#72#geners5393 | 66-72 | geners5393 | denotes | rs5393 |
| 15983230-4#109#124#diseaseC0011860 | 109-124 | diseaseC0011860 | denotes | type 2 diabetes |
| 66#72#geners5393109#124#diseaseC0011860 | 15983230-4#66#72#geners5393 | 15983230-4#109#124#diseaseC0011860 | associated_with | rs5393,type 2 diabetes |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 66-72 | SNP:rs5393 | denotes | rs5393 |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T120 | 17-23 | gene:6514 | denotes | SLC2A2 |
| T121 | 52-60 | disease:C0011849 | denotes | diabetes |
| T122 | 17-23 | gene:6514 | denotes | SLC2A2 |
| T123 | 52-60 | disease:C0011847 | denotes | diabetes |
| T124 | 17-23 | gene:6514 | denotes | SLC2A2 |
| T125 | 109-124 | disease:C0011860 | denotes | type 2 diabetes |
| R61 | T120 | T121 | associated_with | SLC2A2,diabetes |
| R62 | T122 | T123 | associated_with | SLC2A2,diabetes |
| R63 | T124 | T125 | associated_with | SLC2A2,type 2 diabetes |