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PubMed:15983230 / 696-912 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T5 0-216 Sentence denotes All four SNPs of SLC2A2 predicted the conversion to diabetes, and rs5393 (AA genotype) increased the risk of type 2 diabetes in the entire study population by threefold (odds ratio 3.04, 95% CI 1.34-6.88, P = 0.008).

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
1983 17-23 GeneOrGeneProduct denotes SLC2A2 NCBIGene:6514
1984 52-60 DiseaseOrPhenotypicFeature denotes diabetes MESH:D003920
1985 66-72 SequenceVariant denotes rs5393 DBSNP:rs5393
1986 109-124 DiseaseOrPhenotypicFeature denotes type 2 diabetes MESH:D003924

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 66-72 SequenceVariant denotes rs5393

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T30 0-3 GeneOrGeneProduct denotes All
T31 17-23 GeneOrGeneProduct denotes SLC2A2
T32 24-33 GeneOrGeneProduct denotes predicted
T33 52-60 GeneOrGeneProduct denotes diabetes
T34 109-115 GeneOrGeneProduct denotes type 2
T35 116-124 GeneOrGeneProduct denotes diabetes
T36 132-138 GeneOrGeneProduct denotes entire

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T24 17-23 GeneOrGeneProduct denotes SLC2A2
T25 52-60 GeneOrGeneProduct denotes diabetes
T26 109-115 GeneOrGeneProduct denotes type 2
T27 116-124 GeneOrGeneProduct denotes diabetes

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T10 52-60 DiseaseOrPhenotypicFeature denotes diabetes DISEASE
T11 109-124 DiseaseOrPhenotypicFeature denotes type 2 diabetes D003924

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T11 17-23 GeneOrGeneProduct denotes SLC2A2

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T8 52-60 DiseaseOrPhenotypicFeature denotes diabetes 0005015
T9 109-124 DiseaseOrPhenotypicFeature denotes type 2 diabetes 0005148

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T11 52-60 DiseaseOrPhenotypicFeature denotes diabetes DISEASE
T12 109-124 DiseaseOrPhenotypicFeature denotes type 2 diabetes D003924

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T11 52-60 DiseaseOrPhenotypicFeature denotes diabetes DISEASE
T12 109-124 DiseaseOrPhenotypicFeature denotes type 2 diabetes D003924

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T11 17-23 GeneOrGeneProduct denotes SLC2A2
T80964 109-124 DiseaseOrPhenotypicFeature denotes type 2 diabetes D003924
T86586 52-60 DiseaseOrPhenotypicFeature denotes diabetes DISEASE
T50920 66-72 SequenceVariant denotes rs5393

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
15983230-4#66#72#geners5393 66-72 geners5393 denotes rs5393
15983230-4#109#124#diseaseC0011860 109-124 diseaseC0011860 denotes type 2 diabetes
66#72#geners5393109#124#diseaseC0011860 15983230-4#66#72#geners5393 15983230-4#109#124#diseaseC0011860 associated_with rs5393,type 2 diabetes

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 66-72 SNP:rs5393 denotes rs5393

DisGeNET

Id Subject Object Predicate Lexical cue
T120 17-23 gene:6514 denotes SLC2A2
T121 52-60 disease:C0011849 denotes diabetes
T122 17-23 gene:6514 denotes SLC2A2
T123 52-60 disease:C0011847 denotes diabetes
T124 17-23 gene:6514 denotes SLC2A2
T125 109-124 disease:C0011860 denotes type 2 diabetes
R61 T120 T121 associated_with SLC2A2,diabetes
R62 T122 T123 associated_with SLC2A2,diabetes
R63 T124 T125 associated_with SLC2A2,type 2 diabetes