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Oryza-OGER

Id Subject Object Predicate Lexical cue
T1 0-5 http://www.ncbi.nlm.nih.gov/taxonomy/4577 denotes Maize
T2 0-5 http://id.nlm.nih.gov/mesh/D003313 denotes Maize
T3 14-17 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T4 14-17 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T5 50-54 http://web.expasy.org/cellosaurus/CVCL_0047 denotes time
T6 55-58 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T7 55-58 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T8 174-179 http://id.nlm.nih.gov/mesh/D010944 denotes plant
T9 180-191 http://purl.obolibrary.org/obo/GO_0032502 denotes development
T10 195-204 http://purl.obolibrary.org/obo/SO_0000119 denotes regulated
T11 206-225 http://purl.obolibrary.org/obo/UBERON_0000105 denotes developmental stage
T12 220-225 http://purl.obolibrary.org/obo/UBERON_0000105 denotes stage
T13 226-236 http://purl.obolibrary.org/obo/SO_1000009 denotes transition
T14 248-251 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T15 248-251 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T16 252-256 http://web.expasy.org/cellosaurus/CVCL_0047 denotes time
T17 260-269 http://purl.obolibrary.org/obo/GO_0010228 denotes flowering
T18 335-343 http://purl.obolibrary.org/obo/GO_0007610 denotes behavior
T19 370-375 http://purl.obolibrary.org/obo/UBERON_0000105 denotes stage
T20 388-391 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T21 388-391 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T22 501-509 http://purl.obolibrary.org/obo/UBERON_0007021 denotes juvenile
T23 531-536 http://purl.obolibrary.org/obo/UBERON_0007023 denotes adult
T24 578-583 http://purl.obolibrary.org/obo/UBERON_0000105 denotes stage
T25 584-594 http://purl.obolibrary.org/obo/SO_1000009 denotes transition
T26 704-709 http://web.expasy.org/cellosaurus/CVCL_7955 denotes focus
T27 711-714 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T28 711-714 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T29 750-770 http://id.nlm.nih.gov/mesh/D018398 denotes homeodomain proteins
T30 762-770 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T31 762-770 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T32 773-776 http://web.expasy.org/cellosaurus/CVCL_Z424 denotes One
T33 773-776 http://purl.obolibrary.org/obo/CHEBI_58972 denotes One
T34 810-813 http://www.uniprot.org/uniprot/B7XIV9 denotes Hsf
T35 810-813 http://www.uniprot.org/uniprot/P22121 denotes Hsf
T36 810-813 http://purl.obolibrary.org/obo/PR_Q02953 denotes Hsf
T37 810-813 http://www.uniprot.org/uniprot/P41154 denotes Hsf
T38 810-813 http://www.uniprot.org/uniprot/C4V6H6 denotes Hsf
T39 810-813 http://www.uniprot.org/uniprot/Q8SS62 denotes Hsf
T40 810-813 http://www.uniprot.org/uniprot/P10961 denotes Hsf
T41 810-813 http://www.uniprot.org/uniprot/P22813 denotes Hsf
T42 810-813 http://purl.obolibrary.org/obo/PR_P22813 denotes Hsf
T43 810-813 http://www.uniprot.org/uniprot/Q02953 denotes Hsf
T44 810-814 http://web.expasy.org/cellosaurus/CVCL_D003 denotes Hsf1
T45 810-814 http://purl.obolibrary.org/obo/PR_P10961 denotes Hsf1
T46 810-814 http://purl.obolibrary.org/obo/PR_P41151 denotes Hsf1
T47 810-814 http://purl.obolibrary.org/obo/PR_Q13285 denotes Hsf1
T48 810-814 http://www.uniprot.org/uniprot/P38529 denotes Hsf1
T49 810-814 SPL7 denotes Hsf1
T50 810-814 http://purl.obolibrary.org/obo/PR_Q02953 denotes Hsf1
T51 810-814 http://www.uniprot.org/uniprot/P41151 denotes Hsf1
T52 810-814 http://purl.obolibrary.org/obo/PR_Q5AQ33 denotes Hsf1
T53 810-814 http://purl.obolibrary.org/obo/PR_Q00613 denotes Hsf1
T54 810-814 http://www.uniprot.org/uniprot/Q13285 denotes Hsf1
T55 810-814 http://www.uniprot.org/uniprot/Q00613 denotes Hsf1
T56 810-814 http://www.uniprot.org/uniprot/P38532 denotes Hsf1
T57 810-814 HSFB2A denotes Hsf1
T58 810-814 http://www.uniprot.org/uniprot/Q08DJ8 denotes Hsf1
T59 810-814 http://purl.obolibrary.org/obo/PR_Q15637 denotes Hsf1
T60 810-814 http://purl.obolibrary.org/obo/PR_P38529 denotes Hsf1
T61 810-814 http://purl.obolibrary.org/obo/PR_000008790 denotes Hsf1
T62 810-814 http://purl.obolibrary.org/obo/PR_P38532 denotes Hsf1
T63 847-850 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T64 847-850 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T65 857-861 http://purl.obolibrary.org/obo/PR_000024065 denotes this
T66 857-861 http://purl.obolibrary.org/obo/PR_O32583 denotes this
T67 871-879 http://purl.obolibrary.org/obo/GO_0007610 denotes behavior
T68 906-911 http://id.nlm.nih.gov/mesh/D010944 denotes plant
T69 968-972 http://web.expasy.org/cellosaurus/CVCL_0047 denotes time
T70 976-985 http://purl.obolibrary.org/obo/GO_0010228 denotes flowering
T71 1000-1005 http://id.nlm.nih.gov/mesh/D010944 denotes plant
T72 1010-1013 http://purl.obolibrary.org/obo/PR_Q9VVR1 denotes not
T73 1010-1013 http://purl.obolibrary.org/obo/PR_000011409 denotes not
T74 1010-1013 http://purl.obolibrary.org/obo/PR_P43354 denotes not
T75 1010-1013 http://purl.obolibrary.org/obo/PR_000003944 denotes not
T76 1010-1013 http://purl.obolibrary.org/obo/PR_Q5TIS6 denotes not
T77 1010-1013 http://purl.obolibrary.org/obo/PR_Q92685 denotes not
T78 1010-1013 http://purl.obolibrary.org/obo/PR_Q8K2A8 denotes not
T79 1010-1013 http://purl.obolibrary.org/obo/PR_000011336 denotes not
T80 1014-1020 http://purl.obolibrary.org/obo/UBERON_0000468 denotes animal
T81 1014-1020 http://purl.obolibrary.org/obo/UBERON_3010325 denotes animal
T82 1014-1020 http://id.nlm.nih.gov/mesh/D000818 denotes animal
T83 1047-1052 http://www.ncbi.nlm.nih.gov/taxonomy/4577 denotes maize
T84 1047-1052 http://id.nlm.nih.gov/mesh/D003313 denotes maize
T85 1074-1077 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T86 1074-1077 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T87 1082-1086 http://web.expasy.org/cellosaurus/CVCL_0047 denotes time
T88 1090-1099 http://purl.obolibrary.org/obo/GO_0010228 denotes flowering
T89 1130-1133 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T90 1130-1133 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T91 1178-1182 http://web.expasy.org/cellosaurus/CVCL_0047 denotes time
T92 1228-1233 http://purl.obolibrary.org/obo/UBERON_0000105 denotes stage
T93 1234-1244 http://purl.obolibrary.org/obo/SO_1000009 denotes transition
T94 1253-1256 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T95 1253-1256 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T96 1257-1261 http://web.expasy.org/cellosaurus/CVCL_0047 denotes time
T97 1265-1274 http://purl.obolibrary.org/obo/GO_0010228 denotes flowering
T98 1311-1314 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T99 1311-1314 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T100 1315-1322 http://purl.obolibrary.org/obo/CHEBI_26519 denotes radical
T101 1344-1347 http://www.uniprot.org/uniprot/P12993 denotes see
T102 1344-1347 http://purl.obolibrary.org/obo/PR_000002226 denotes see
T103 1492-1495 http://web.expasy.org/cellosaurus/CVCL_E773 denotes may
T104 1496-1501 http://web.expasy.org/cellosaurus/CVCL_Z366 denotes mimic
T105 1534-1538 http://purl.obolibrary.org/obo/CHEBI_33292 denotes fuel

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 750-770 http://identifiers.org/ricegap/LOC_Os02g05450 denotes homeodomain proteins
T2 810-814 http://identifiers.org/ricegap/LOC_Os05g45410 denotes Hsf1
T3 810-814 http://identifiers.org/ricegap/LOC_Os04g48030 denotes Hsf1
T4 810-814 http://identifiers.org/ricegap/LOC_Os01g39020 denotes Hsf1
T18875 750-770 http://identifiers.org/rapdb.locus/Os02g0147800 denotes homeodomain proteins
T43879 810-814 http://identifiers.org/rapdb.locus/Os05g0530400 denotes Hsf1
T14562 810-814 http://identifiers.org/rapdb.locus/Os04g0568700 denotes Hsf1
T85574 810-814 http://identifiers.org/rapdb.locus/Os01g0571300 denotes Hsf1
M_0 810-816 hunflair:NA:Gene denotes Hsf1-O
M_1 0-5 hunflair:NA:Species denotes Maize
M_2 912-926 hunflair:NA:Disease denotes heterochronism
M_3 1047-1052 hunflair:NA:Species denotes maize
M_4 785-808 hunflair:NA:Gene denotes Hairy sheath frayed 1-O

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 805-806 http://identifiers.org/oryzabase.gene/11216 denotes 1

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 810-816 hunflair:NA:Gene denotes Hsf1-O
M_1 0-5 hunflair:NA:Species denotes Maize
M_2 912-926 hunflair:NA:Disease denotes heterochronism
M_3 1047-1052 hunflair:NA:Species denotes maize
M_4 785-808 hunflair:NA:Gene denotes Hairy sheath frayed 1-O

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-92 Sentence denotes Maize mutants and variants altering developmental time and their heterochronic interactions.
T2 93-281 Sentence denotes It is useful to envision two fundamentally different ways by which the timing of plant development is regulated: developmental stage-transition mechanisms and time-to-flowering mechanisms.
T3 282-363 Sentence denotes The existence of both mechanisms is indicated by the behavior of various mutants.
T4 364-550 Sentence denotes Shoot stage transitions are defined by dominant mutants representing at least four different genes; each mutant retards transitions from juvenile shoot stages to more adult shoot stages.
T5 551-927 Sentence denotes In addition, dominant leaf stage-transition mutants in at least seven different genes have similar phenotypes, but the leaf rather than the shoot is the focus (and at least two of these genes encode homeodomain proteins.) One mutant, Hairy sheath frayed 1-O (Hsf1-O) simultaneously affects shoot and leaf; this mutant's behavior initiated our interest in plant heterochronism.
T6 928-986 Sentence denotes The second type of timekeeping involves time-to-flowering.
T7 987-1153 Sentence denotes As with most plant but not animal species, cultivars of the maize species vary greatly for the time-to-flowering quantitative trait: between 6 and 14 weeks is common.
T8 1154-1340 Sentence denotes It is via the 'slipping time frames' interaction that takes place between stage-transition mutants and time-to-flowering genetic backgrounds that unexpected and radical phenotypes occur.
T9 1341-1642 Sentence denotes We see a reservoir of previously unsuspected morphological possibilities among the few heterochronic genotypes we have constructed, possibilities that may mimic the sort of variation needed to fuel macroevolution without having to posit (as done by Goldschmidt) any special macromutational mechanisms.