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PubMed:15872149 JSONTXT

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CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 874-878 Cell denotes poly http://purl.obolibrary.org/obo/CL:0000096|http://purl.obolibrary.org/obo/CL:0000775

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 1555-1566 http://purl.obolibrary.org/obo/MAT_0000004 denotes gametophyte

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 1091-1094 http://www.uniprot.org/uniprot/P00920 denotes Ca2
T2 1106-1113 http://www.uniprot.org/uniprot/Q62504 denotes sharply

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 191-198 http://purl.bioontology.org/ontology/STY/T024 denotes tissues
T2 1434-1441 http://purl.bioontology.org/ontology/NCBITAXON/53324 denotes helical
T3 1647-1654 http://purl.bioontology.org/ontology/STY/T024 denotes tissues

GO-BP

Id Subject Object Predicate Lexical cue
T1 344-353 http://purl.obolibrary.org/obo/GO_0051923 denotes sulphated
T2 540-548 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfonic
T3 784-792 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T4 889-892 http://purl.obolibrary.org/obo/GO_0048915 denotes PLL

GO-MF

Id Subject Object Predicate Lexical cue
T1 63-71 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T2 284-292 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T3 444-454 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T4 1017-1027 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T5 430-437 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T6 1003-1010 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T7 430-437 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T8 1003-1010 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T9 430-437 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T10 1003-1010 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T11 430-437 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T12 1003-1010 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 191-198 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
T2 1647-1654 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 1555-1566 http://purl.obolibrary.org/obo/MAT_0000004 denotes gametophyte

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-199 Sentence denotes Production and characterization of a phage-display recombinant antibody against carrageenans: evidence for the recognition of a secondary structure of carrageenan chains present in red algae tissues.
TextSentencer_T2 200-386 Sentence denotes We report the isolation, for the first time by phage display, of a scFv recombinant antibody called B3 directed against carrageenans, the major sulphated polysaccharides of red seaweeds.
TextSentencer_T3 387-604 Sentence denotes Immunoassays were used to characterize the binding of B3 antibodies toward the three main carrageenan forms (iota, kappa, and lambda) differing by their sulfonic ester content and the presence of 3,6-anhydrogalactose.
TextSentencer_T4 605-805 Sentence denotes In enzyme-linked immunoadsorbent assay (ELISA), B3 soluble scFv showed a high reactivity towards iota-carrageenan at any titer but, at high titer only, recognized also the highly sulfated lambda-form.
TextSentencer_T5 806-894 Sentence denotes Surface-adsorbed kappa-polymers were only recognized in presence of poly-L-lysine (PLL).
TextSentencer_T6 895-1147 Sentence denotes The replacement of Na+ ions by K+ in the buffers had no effect on kappa-polymer detection but increased the binding of B3 antibodies toward both iota- and lambda-carrageenans, whereas addition of Ca2+ decreased sharply the recognition of the iota-form.
TextSentencer_T7 1148-1373 Sentence denotes In competitive assays, low titer B3 soluble scFv showed a iota>kappa>lambda selectivity and recognized a mixture of iota-oligomers with degrees of polymerization between 4 and 18 but not sub-fractions of 4 or 6 residues long.
TextSentencer_T8 1374-1477 Sentence denotes We suggest therefore that the B3 epitope could consist of a helical conformation of carrageenan chains.
TextSentencer_T9 1478-1762 Sentence denotes Immunofluorescence microscopy showed that, amongst other red algae, Chondrus gametophyte (containing iota-chains) was strongly recognized by B3 scFv whereas sporophytic tissues rich in lambda-carrageenans were not, assessing the preference of this probe for iota-carrageenans in situ.
TextSentencer_T10 1763-1823 Sentence denotes The high potential of the B3 recombinant probe is discussed.
T1 0-199 Sentence denotes Production and characterization of a phage-display recombinant antibody against carrageenans: evidence for the recognition of a secondary structure of carrageenan chains present in red algae tissues.
T2 200-386 Sentence denotes We report the isolation, for the first time by phage display, of a scFv recombinant antibody called B3 directed against carrageenans, the major sulphated polysaccharides of red seaweeds.
T3 387-604 Sentence denotes Immunoassays were used to characterize the binding of B3 antibodies toward the three main carrageenan forms (iota, kappa, and lambda) differing by their sulfonic ester content and the presence of 3,6-anhydrogalactose.
T4 605-805 Sentence denotes In enzyme-linked immunoadsorbent assay (ELISA), B3 soluble scFv showed a high reactivity towards iota-carrageenan at any titer but, at high titer only, recognized also the highly sulfated lambda-form.
T5 806-894 Sentence denotes Surface-adsorbed kappa-polymers were only recognized in presence of poly-L-lysine (PLL).
T6 895-1147 Sentence denotes The replacement of Na+ ions by K+ in the buffers had no effect on kappa-polymer detection but increased the binding of B3 antibodies toward both iota- and lambda-carrageenans, whereas addition of Ca2+ decreased sharply the recognition of the iota-form.
T7 1148-1373 Sentence denotes In competitive assays, low titer B3 soluble scFv showed a iota>kappa>lambda selectivity and recognized a mixture of iota-oligomers with degrees of polymerization between 4 and 18 but not sub-fractions of 4 or 6 residues long.
T8 1374-1477 Sentence denotes We suggest therefore that the B3 epitope could consist of a helical conformation of carrageenan chains.
T9 1478-1762 Sentence denotes Immunofluorescence microscopy showed that, amongst other red algae, Chondrus gametophyte (containing iota-chains) was strongly recognized by B3 scFv whereas sporophytic tissues rich in lambda-carrageenans were not, assessing the preference of this probe for iota-carrageenans in situ.
T10 1763-1823 Sentence denotes The high potential of the B3 recombinant probe is discussed.
T1 0-199 Sentence denotes Production and characterization of a phage-display recombinant antibody against carrageenans: evidence for the recognition of a secondary structure of carrageenan chains present in red algae tissues.
T2 200-386 Sentence denotes We report the isolation, for the first time by phage display, of a scFv recombinant antibody called B3 directed against carrageenans, the major sulphated polysaccharides of red seaweeds.
T3 387-604 Sentence denotes Immunoassays were used to characterize the binding of B3 antibodies toward the three main carrageenan forms (iota, kappa, and lambda) differing by their sulfonic ester content and the presence of 3,6-anhydrogalactose.
T4 605-805 Sentence denotes In enzyme-linked immunoadsorbent assay (ELISA), B3 soluble scFv showed a high reactivity towards iota-carrageenan at any titer but, at high titer only, recognized also the highly sulfated lambda-form.
T5 806-894 Sentence denotes Surface-adsorbed kappa-polymers were only recognized in presence of poly-L-lysine (PLL).
T6 895-1147 Sentence denotes The replacement of Na+ ions by K+ in the buffers had no effect on kappa-polymer detection but increased the binding of B3 antibodies toward both iota- and lambda-carrageenans, whereas addition of Ca2+ decreased sharply the recognition of the iota-form.
T7 1148-1373 Sentence denotes In competitive assays, low titer B3 soluble scFv showed a iota>kappa>lambda selectivity and recognized a mixture of iota-oligomers with degrees of polymerization between 4 and 18 but not sub-fractions of 4 or 6 residues long.
T8 1374-1477 Sentence denotes We suggest therefore that the B3 epitope could consist of a helical conformation of carrageenan chains.
T9 1478-1762 Sentence denotes Immunofluorescence microscopy showed that, amongst other red algae, Chondrus gametophyte (containing iota-chains) was strongly recognized by B3 scFv whereas sporophytic tissues rich in lambda-carrageenans were not, assessing the preference of this probe for iota-carrageenans in situ.
T10 1763-1823 Sentence denotes The high potential of the B3 recombinant probe is discussed.

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 300-302 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3
PD-GlycoEpitope-B_T2 441-443 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3
PD-GlycoEpitope-B_T3 653-655 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3
PD-GlycoEpitope-B_T4 1014-1016 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3
PD-GlycoEpitope-B_T5 1181-1183 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3
PD-GlycoEpitope-B_T6 1404-1406 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3
PD-GlycoEpitope-B_T7 1619-1621 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3
PD-GlycoEpitope-B_T8 1789-1791 http://www.glycoepitope.jp/epitopes/AN0574 denotes B3

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 191-198 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues
PD-UBERON-AE-B_T2 1647-1654 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 889-892 Disease denotes PLL http://purl.obolibrary.org/obo/MONDO_0001023

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 1546-1554 OrganismTaxon denotes Chondrus 2768

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 513-519 Body_part denotes lambda http://purl.obolibrary.org/obo/UBERON_0013424
T2 793-799 Body_part denotes lambda http://purl.obolibrary.org/obo/UBERON_0013424
T3 1050-1056 Body_part denotes lambda http://purl.obolibrary.org/obo/UBERON_0013424
T4 1217-1223 Body_part denotes lambda http://purl.obolibrary.org/obo/UBERON_0013424
T5 1663-1669 Body_part denotes lambda http://purl.obolibrary.org/obo/UBERON_0013424

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1555-1566 Body_part denotes gametophyte http://purl.obolibrary.org/obo/MAT_0000004