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GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 898-906 Glycan_Motif denotes arabinan https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G22535ZZ
T2 931-939 Glycan_Motif denotes arabinan https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G22535ZZ
T3 1361-1370 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T5 1595-1604 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T7 1968-1977 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T9 2180-2189 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 898-906 https://glytoucan.org/Structures/Glycans/G22535ZZ denotes arabinan
T2 931-939 https://glytoucan.org/Structures/Glycans/G22535ZZ denotes arabinan
T3 1361-1370 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T4 1361-1370 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T5 1595-1604 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T6 1595-1604 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T7 1968-1977 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T8 1968-1977 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T9 2180-2189 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T10 2180-2189 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose

sentences

Id Subject Object Predicate Lexical cue
T1 0-109 Sentence denotes An exo-beta-1,3-galactanase having a novel beta-1,3-galactan-binding module from Phanerochaete chrysosporium.
T2 110-237 Sentence denotes An exo-beta-1,3-galactanase gene from Phanerochaete chrysosporium has been cloned, sequenced, and expressed in Pichia pastoris.
T3 238-545 Sentence denotes The complete amino acid sequence of the exo-beta-1,3-galactanase indicated that the enzyme consists of an N-terminal catalytic module with similarity to glycoside hydrolase family 43 and an additional unknown functional domain similar to carbohydrate-binding module family 6 (CBM6) in the C-terminal region.
T4 546-633 Sentence denotes The molecular mass of the recombinant enzyme was estimated as 55 kDa based on SDS-PAGE.
T5 634-1006 Sentence denotes The enzyme showed reactivity only toward beta-1,3-linked galactosyl oligosaccharides and polysaccharide as substrates but did not hydrolyze beta-1,4-linked galacto-oligosaccharides, beta-1,6-linked galacto-oligosaccharides, pectic galactan, larch arabinogalactan, arabinan, gum arabic, debranched arabinan, laminarin, soluble birchwood xylan, or soluble oat spelled xylan.
T6 1007-1252 Sentence denotes The enzyme also did not hydrolyze beta-1,3-galactosyl galactosaminide, beta-1,3-galactosyl glucosaminide, or beta-1,3-galactosyl arabinofuranoside, suggesting that it specifically cleaves the internal beta-1,3-linkage of two galactosyl residues.
T7 1253-1418 Sentence denotes High performance liquid chromatographic analysis of the hydrolysis products showed that the enzyme produced galactose from beta-1,3-galactan in an exo-acting manner.
T8 1419-1497 Sentence denotes However, no activity toward p-nitrophenyl beta-galactopyranoside was detected.
T9 1498-1682 Sentence denotes When incubated with arabinogalactan proteins, the enzyme produced oligosaccharides together with galactose, suggesting that it is able to bypass beta-1,6-linked galactosyl side chains.
T10 1683-1883 Sentence denotes The C-terminal CBM6 did not show any affinity for known substrates of CBM6 such as xylan, cellulose, and beta-1,3-glucan, although it bound beta-1,3-galactan when analyzed by affinity electrophoresis.
T11 1884-2142 Sentence denotes Frontal affinity chromatography for the CBM6 moiety using several kinds of terminal galactose-containing oligosaccharides as the analytes clearly indicated that the CBM6 specifically interacted with oligosaccharides containing a beta-1,3-galactobiose moiety.
T12 2143-2272 Sentence denotes When the degree of polymerization of galactose oligomers was increased, the binding affinity of the CBM6 showed no marked change.

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 898-906 http://www.glycoepitope.jp/epitopes/EP0508 denotes arabinan
T2 931-939 http://www.glycoepitope.jp/epitopes/EP0508 denotes arabinan

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 898-906 Glycan denotes arabinan https://api.glycosmos.org/wurcs2image/latest/png/binary/G22535ZZ
T2 931-939 Glycan denotes arabinan https://api.glycosmos.org/wurcs2image/latest/png/binary/G22535ZZ

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 898-906 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes arabinan http://www.glycoepitope.jp/epitopes/EP0508
T2 931-939 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes arabinan http://www.glycoepitope.jp/epitopes/EP0508

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 81-108 OrganismTaxon denotes Phanerochaete chrysosporium 2822231
T2 148-175 OrganismTaxon denotes Phanerochaete chrysosporium 2822231
T3 221-236 OrganismTaxon denotes Pichia pastoris 4922
T4 908-918 OrganismTaxon denotes gum arabic 138043

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 908-911 Body_part denotes gum http://purl.obolibrary.org/obo/UBERON_0001828
T2 1884-1891 Body_part denotes Frontal http://purl.obolibrary.org/obo/UBERON_0000209

sentences

Id Subject Object Predicate Lexical cue
T1 0-109 Sentence denotes An exo-beta-1,3-galactanase having a novel beta-1,3-galactan-binding module from Phanerochaete chrysosporium.
T2 110-237 Sentence denotes An exo-beta-1,3-galactanase gene from Phanerochaete chrysosporium has been cloned, sequenced, and expressed in Pichia pastoris.
T3 238-545 Sentence denotes The complete amino acid sequence of the exo-beta-1,3-galactanase indicated that the enzyme consists of an N-terminal catalytic module with similarity to glycoside hydrolase family 43 and an additional unknown functional domain similar to carbohydrate-binding module family 6 (CBM6) in the C-terminal region.
T4 546-633 Sentence denotes The molecular mass of the recombinant enzyme was estimated as 55 kDa based on SDS-PAGE.
T5 634-1006 Sentence denotes The enzyme showed reactivity only toward beta-1,3-linked galactosyl oligosaccharides and polysaccharide as substrates but did not hydrolyze beta-1,4-linked galacto-oligosaccharides, beta-1,6-linked galacto-oligosaccharides, pectic galactan, larch arabinogalactan, arabinan, gum arabic, debranched arabinan, laminarin, soluble birchwood xylan, or soluble oat spelled xylan.
T6 1007-1252 Sentence denotes The enzyme also did not hydrolyze beta-1,3-galactosyl galactosaminide, beta-1,3-galactosyl glucosaminide, or beta-1,3-galactosyl arabinofuranoside, suggesting that it specifically cleaves the internal beta-1,3-linkage of two galactosyl residues.
T7 1253-1418 Sentence denotes High performance liquid chromatographic analysis of the hydrolysis products showed that the enzyme produced galactose from beta-1,3-galactan in an exo-acting manner.
T8 1419-1497 Sentence denotes However, no activity toward p-nitrophenyl beta-galactopyranoside was detected.
T9 1498-1682 Sentence denotes When incubated with arabinogalactan proteins, the enzyme produced oligosaccharides together with galactose, suggesting that it is able to bypass beta-1,6-linked galactosyl side chains.
T10 1683-1883 Sentence denotes The C-terminal CBM6 did not show any affinity for known substrates of CBM6 such as xylan, cellulose, and beta-1,3-glucan, although it bound beta-1,3-galactan when analyzed by affinity electrophoresis.
T11 1884-2142 Sentence denotes Frontal affinity chromatography for the CBM6 moiety using several kinds of terminal galactose-containing oligosaccharides as the analytes clearly indicated that the CBM6 specifically interacted with oligosaccharides containing a beta-1,3-galactobiose moiety.
T12 2143-2272 Sentence denotes When the degree of polymerization of galactose oligomers was increased, the binding affinity of the CBM6 showed no marked change.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-109 Sentence denotes An exo-beta-1,3-galactanase having a novel beta-1,3-galactan-binding module from Phanerochaete chrysosporium.
T2 110-237 Sentence denotes An exo-beta-1,3-galactanase gene from Phanerochaete chrysosporium has been cloned, sequenced, and expressed in Pichia pastoris.
T3 238-545 Sentence denotes The complete amino acid sequence of the exo-beta-1,3-galactanase indicated that the enzyme consists of an N-terminal catalytic module with similarity to glycoside hydrolase family 43 and an additional unknown functional domain similar to carbohydrate-binding module family 6 (CBM6) in the C-terminal region.
T4 546-633 Sentence denotes The molecular mass of the recombinant enzyme was estimated as 55 kDa based on SDS-PAGE.
T5 634-1006 Sentence denotes The enzyme showed reactivity only toward beta-1,3-linked galactosyl oligosaccharides and polysaccharide as substrates but did not hydrolyze beta-1,4-linked galacto-oligosaccharides, beta-1,6-linked galacto-oligosaccharides, pectic galactan, larch arabinogalactan, arabinan, gum arabic, debranched arabinan, laminarin, soluble birchwood xylan, or soluble oat spelled xylan.
T6 1007-1252 Sentence denotes The enzyme also did not hydrolyze beta-1,3-galactosyl galactosaminide, beta-1,3-galactosyl glucosaminide, or beta-1,3-galactosyl arabinofuranoside, suggesting that it specifically cleaves the internal beta-1,3-linkage of two galactosyl residues.
T7 1253-1418 Sentence denotes High performance liquid chromatographic analysis of the hydrolysis products showed that the enzyme produced galactose from beta-1,3-galactan in an exo-acting manner.
T8 1419-1497 Sentence denotes However, no activity toward p-nitrophenyl beta-galactopyranoside was detected.
T9 1498-1682 Sentence denotes When incubated with arabinogalactan proteins, the enzyme produced oligosaccharides together with galactose, suggesting that it is able to bypass beta-1,6-linked galactosyl side chains.
T10 1683-1883 Sentence denotes The C-terminal CBM6 did not show any affinity for known substrates of CBM6 such as xylan, cellulose, and beta-1,3-glucan, although it bound beta-1,3-galactan when analyzed by affinity electrophoresis.
T11 1884-2142 Sentence denotes Frontal affinity chromatography for the CBM6 moiety using several kinds of terminal galactose-containing oligosaccharides as the analytes clearly indicated that the CBM6 specifically interacted with oligosaccharides containing a beta-1,3-galactobiose moiety.
T12 2143-2272 Sentence denotes When the degree of polymerization of galactose oligomers was increased, the binding affinity of the CBM6 showed no marked change.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 898-906 Glycan denotes arabinan https://api.glycosmos.org/wurcs2image/latest/png/binary/G22535ZZ
T2 931-939 Glycan denotes arabinan https://api.glycosmos.org/wurcs2image/latest/png/binary/G22535ZZ

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 898-906 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes arabinan http://www.glycoepitope.jp/epitopes/EP0508
T2 931-939 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes arabinan http://www.glycoepitope.jp/epitopes/EP0508

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 81-108 OrganismTaxon denotes Phanerochaete chrysosporium 2822231
T2 148-175 OrganismTaxon denotes Phanerochaete chrysosporium 2822231
T3 221-236 OrganismTaxon denotes Pichia pastoris 4922
T4 908-918 OrganismTaxon denotes gum arabic 138043

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 908-911 Body_part denotes gum http://purl.obolibrary.org/obo/UBERON_0001828
T2 1884-1891 Body_part denotes Frontal http://purl.obolibrary.org/obo/UBERON_0000209