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PubMed:15761024 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 1222-1241 https://glytoucan.org/Structures/Glycans/G00055MO denotes N-acetyllactosamine
T2 1578-1597 https://glytoucan.org/Structures/Glycans/G00055MO denotes N-acetyllactosamine
T3 1767-1786 https://glytoucan.org/Structures/Glycans/G00055MO denotes N-acetyllactosamine

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1222-1241 Glycan_Motif denotes N-acetyllactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00055MO
T2 1578-1597 Glycan_Motif denotes N-acetyllactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00055MO
T3 1767-1786 Glycan_Motif denotes N-acetyllactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00055MO

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 1222-1241 https://glytoucan.org/Structures/Glycans/G00055MO denotes N-acetyllactosamine
T2 1578-1597 https://glytoucan.org/Structures/Glycans/G00055MO denotes N-acetyllactosamine
T3 1767-1786 https://glytoucan.org/Structures/Glycans/G00055MO denotes N-acetyllactosamine

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-104 Sentence denotes Xenopus galectin-VIIa binds N-glycans of members of the cortical granule lectin family (xCGL and xCGL2).
TextSentencer_T2 105-280 Sentence denotes We have identified members of the Xenopus cortical granule lectin (xCGL) family as candidate target glycoproteins of Xenopus galectin-VIIa (xgalectin-VIIa) in Xenopus embryos.
TextSentencer_T3 281-375 Sentence denotes In addition to the original xCGL, we also identified a novel member of the xCGL family, xCGL2.
TextSentencer_T4 376-498 Sentence denotes Expression of the mRNAs of xCGL and xCGL2, as well as that of xgalectin-VIIa, was observed throughout early embryogenesis.
TextSentencer_T5 499-768 Sentence denotes Two and three potential N-glycosylation sites were deduced from the amino acid sequences of xCGL and xCGL2, respectively, and xgalectin-VIIa recognizes N-glycans linked to a common site in xCGL and xCGL2 and also recognizes N-glycans linked to a site specific to xCGL2.
TextSentencer_T6 769-840 Sentence denotes However, interaction between xgalectin-Ia and xCGLs was not detectable.
TextSentencer_T7 841-969 Sentence denotes We also obtained consistent results on surface plasmon resonance analysis involving xCGLs as ligands and xgalectins as analytes.
TextSentencer_T8 970-1064 Sentence denotes The Kd value of the interaction between xgalectin-VIIa and xCGLs was calculated to be 35.9 nM.
TextSentencer_T9 1065-1317 Sentence denotes The structures of the N-glycans of xCGLs, which were recognized by xgalectin-VIIa, were analyzed by the two-dimensional sugar map method, and three kinds of N-acetyllactosamine type, biantennary N-glycans were identified as the major neutral N-glycans.
TextSentencer_T10 1318-1435 Sentence denotes The binding specificity of oligosaccharides for xgalectin-VIIa was analyzed by frontal affinity chromatography (FAC).
TextSentencer_T11 1436-1684 Sentence denotes The oligosaccharide specificity pattern of xgalectin-VIIa was similar to that of the human homolog galectin-3, and it was also shown that the N-acetyllactosamine type, biantennary N-glycans exhibit high affinity for xgalectin-VIIa (Kd = 11 microM).
TextSentencer_T12 1685-1927 Sentence denotes These results suggest that xgalectin-VIIa interacts with xCGLs through binding to N-acetyllactosamine type N-glycans and that this interaction might make it possible to organize a lectin network involving members of different lectin families.
T1 0-104 Sentence denotes Xenopus galectin-VIIa binds N-glycans of members of the cortical granule lectin family (xCGL and xCGL2).
T2 105-280 Sentence denotes We have identified members of the Xenopus cortical granule lectin (xCGL) family as candidate target glycoproteins of Xenopus galectin-VIIa (xgalectin-VIIa) in Xenopus embryos.
T3 281-375 Sentence denotes In addition to the original xCGL, we also identified a novel member of the xCGL family, xCGL2.
T4 376-498 Sentence denotes Expression of the mRNAs of xCGL and xCGL2, as well as that of xgalectin-VIIa, was observed throughout early embryogenesis.
T5 499-768 Sentence denotes Two and three potential N-glycosylation sites were deduced from the amino acid sequences of xCGL and xCGL2, respectively, and xgalectin-VIIa recognizes N-glycans linked to a common site in xCGL and xCGL2 and also recognizes N-glycans linked to a site specific to xCGL2.
T6 769-840 Sentence denotes However, interaction between xgalectin-Ia and xCGLs was not detectable.
T7 841-969 Sentence denotes We also obtained consistent results on surface plasmon resonance analysis involving xCGLs as ligands and xgalectins as analytes.
T8 970-1064 Sentence denotes The Kd value of the interaction between xgalectin-VIIa and xCGLs was calculated to be 35.9 nM.
T9 1065-1317 Sentence denotes The structures of the N-glycans of xCGLs, which were recognized by xgalectin-VIIa, were analyzed by the two-dimensional sugar map method, and three kinds of N-acetyllactosamine type, biantennary N-glycans were identified as the major neutral N-glycans.
T10 1318-1435 Sentence denotes The binding specificity of oligosaccharides for xgalectin-VIIa was analyzed by frontal affinity chromatography (FAC).
T11 1436-1684 Sentence denotes The oligosaccharide specificity pattern of xgalectin-VIIa was similar to that of the human homolog galectin-3, and it was also shown that the N-acetyllactosamine type, biantennary N-glycans exhibit high affinity for xgalectin-VIIa (Kd = 11 microM).
T12 1685-1927 Sentence denotes These results suggest that xgalectin-VIIa interacts with xCGLs through binding to N-acetyllactosamine type N-glycans and that this interaction might make it possible to organize a lectin network involving members of different lectin families.
T1 0-104 Sentence denotes Xenopus galectin-VIIa binds N-glycans of members of the cortical granule lectin family (xCGL and xCGL2).
T2 105-280 Sentence denotes We have identified members of the Xenopus cortical granule lectin (xCGL) family as candidate target glycoproteins of Xenopus galectin-VIIa (xgalectin-VIIa) in Xenopus embryos.
T3 281-375 Sentence denotes In addition to the original xCGL, we also identified a novel member of the xCGL family, xCGL2.
T4 376-498 Sentence denotes Expression of the mRNAs of xCGL and xCGL2, as well as that of xgalectin-VIIa, was observed throughout early embryogenesis.
T5 499-768 Sentence denotes Two and three potential N-glycosylation sites were deduced from the amino acid sequences of xCGL and xCGL2, respectively, and xgalectin-VIIa recognizes N-glycans linked to a common site in xCGL and xCGL2 and also recognizes N-glycans linked to a site specific to xCGL2.
T6 769-840 Sentence denotes However, interaction between xgalectin-Ia and xCGLs was not detectable.
T7 841-969 Sentence denotes We also obtained consistent results on surface plasmon resonance analysis involving xCGLs as ligands and xgalectins as analytes.
T8 970-1064 Sentence denotes The Kd value of the interaction between xgalectin-VIIa and xCGLs was calculated to be 35.9 nM.
T9 1065-1317 Sentence denotes The structures of the N-glycans of xCGLs, which were recognized by xgalectin-VIIa, were analyzed by the two-dimensional sugar map method, and three kinds of N-acetyllactosamine type, biantennary N-glycans were identified as the major neutral N-glycans.
T10 1318-1435 Sentence denotes The binding specificity of oligosaccharides for xgalectin-VIIa was analyzed by frontal affinity chromatography (FAC).
T11 1436-1684 Sentence denotes The oligosaccharide specificity pattern of xgalectin-VIIa was similar to that of the human homolog galectin-3, and it was also shown that the N-acetyllactosamine type, biantennary N-glycans exhibit high affinity for xgalectin-VIIa (Kd = 11 microM).
T12 1685-1927 Sentence denotes These results suggest that xgalectin-VIIa interacts with xCGLs through binding to N-acetyllactosamine type N-glycans and that this interaction might make it possible to organize a lectin network involving members of different lectin families.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 272-279 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos

GlycoBiology-GDGDB

Id Subject Object Predicate Lexical cue
_T1 1061-1063 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00386 denotes nM

uniprot-human

Id Subject Object Predicate Lexical cue
T1 1430-1433 http://www.uniprot.org/uniprot/Q00597 denotes FAC
T2 1535-1545 http://www.uniprot.org/uniprot/P17931 denotes galectin-3

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 1535-1545 http://www.uniprot.org/uniprot/P16110 denotes galectin-3

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 567-587 http://purl.bioontology.org/ontology/STY/T087 denotes amino acid sequences

GO-BP

Id Subject Object Predicate Lexical cue
T1 484-497 http://purl.obolibrary.org/obo/GO_0009790 denotes embryogenesis
T2 484-497 http://purl.obolibrary.org/obo/GO_0009792 denotes embryogenesis
T3 484-497 http://purl.obolibrary.org/obo/GO_0009793 denotes embryogenesis
T4 525-538 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

GO-MF

Id Subject Object Predicate Lexical cue
T1 22-27 http://purl.obolibrary.org/obo/GO_0070026 denotes binds
T2 1322-1329 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 1756-1763 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 22-27 http://purl.obolibrary.org/obo/GO_0003680 denotes binds
T5 1322-1329 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T6 1756-1763 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T7 22-27 http://purl.obolibrary.org/obo/GO_0017091 denotes binds
T8 1322-1329 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T9 1756-1763 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T10 22-27 http://purl.obolibrary.org/obo/GO_0005488 denotes binds
T11 1322-1329 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T12 1756-1763 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T13 22-29 http://purl.obolibrary.org/obo/GO_0005112 denotes binds N
T14 1756-1768 http://purl.obolibrary.org/obo/GO_0005112 denotes binding to N
T15 934-941 http://purl.obolibrary.org/obo/GO_0005488 denotes ligands

GO-CC

Id Subject Object Predicate Lexical cue
T1 56-72 http://purl.obolibrary.org/obo/GO_0060473 denotes cortical granule
T2 147-163 http://purl.obolibrary.org/obo/GO_0060473 denotes cortical granule

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 272-279 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos
T2 1854-1862 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organize

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 272-279 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1854-1862 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organize
PD-UBERON-AE-B_T2 272-279 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 28-37 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T2 651-660 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T3 723-732 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T4 1087-1096 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T5 1260-1269 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T6 1307-1316 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T7 1616-1625 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T8 1792-1801 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans

Lectin

Id Subject Object Predicate Lexical cue
Lectin_T1 8-21 https://acgg.asia/db/lfdb/LfDB0067 denotes galectin-VIIa
Lectin_T2 230-243 https://acgg.asia/db/lfdb/LfDB0067 denotes galectin-VIIa
Lectin_T3 245-259 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T4 438-452 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T5 625-639 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T6 1010-1024 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T7 1132-1146 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T8 1366-1380 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T9 1479-1493 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T10 1652-1666 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa
Lectin_T11 1712-1726 https://acgg.asia/db/lfdb/LfDB0067 denotes xgalectin-VIIa

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 1185-1190 "http://rdf.glycoinfo.org/glycan/G59665TO" denotes sugar
GlycanIUPAC_T2 1185-1190 "http://rdf.glycoinfo.org/glycan/G32915EI" denotes sugar
GlycanIUPAC_T3 1185-1190 "http://rdf.glycoinfo.org/glycan/G60625TS" denotes sugar

Lectin-Jamboree

Id Subject Object Predicate Lexical cue
T1 73-79 lectin denotes lectin
T2 164-170 lectin denotes lectin
T3 1865-1871 lectin denotes lectin
T4 1911-1917 lectin denotes lectin

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-104 Sentence denotes Xenopus galectin-VIIa binds N-glycans of members of the cortical granule lectin family (xCGL and xCGL2).
T2 105-280 Sentence denotes We have identified members of the Xenopus cortical granule lectin (xCGL) family as candidate target glycoproteins of Xenopus galectin-VIIa (xgalectin-VIIa) in Xenopus embryos.
T3 281-375 Sentence denotes In addition to the original xCGL, we also identified a novel member of the xCGL family, xCGL2.
T4 376-498 Sentence denotes Expression of the mRNAs of xCGL and xCGL2, as well as that of xgalectin-VIIa, was observed throughout early embryogenesis.
T5 499-768 Sentence denotes Two and three potential N-glycosylation sites were deduced from the amino acid sequences of xCGL and xCGL2, respectively, and xgalectin-VIIa recognizes N-glycans linked to a common site in xCGL and xCGL2 and also recognizes N-glycans linked to a site specific to xCGL2.
T6 769-840 Sentence denotes However, interaction between xgalectin-Ia and xCGLs was not detectable.
T7 841-969 Sentence denotes We also obtained consistent results on surface plasmon resonance analysis involving xCGLs as ligands and xgalectins as analytes.
T8 970-1064 Sentence denotes The Kd value of the interaction between xgalectin-VIIa and xCGLs was calculated to be 35.9 nM.
T9 1065-1317 Sentence denotes The structures of the N-glycans of xCGLs, which were recognized by xgalectin-VIIa, were analyzed by the two-dimensional sugar map method, and three kinds of N-acetyllactosamine type, biantennary N-glycans were identified as the major neutral N-glycans.
T10 1318-1435 Sentence denotes The binding specificity of oligosaccharides for xgalectin-VIIa was analyzed by frontal affinity chromatography (FAC).
T11 1436-1684 Sentence denotes The oligosaccharide specificity pattern of xgalectin-VIIa was similar to that of the human homolog galectin-3, and it was also shown that the N-acetyllactosamine type, biantennary N-glycans exhibit high affinity for xgalectin-VIIa (Kd = 11 microM).
T12 1685-1927 Sentence denotes These results suggest that xgalectin-VIIa interacts with xCGLs through binding to N-acetyllactosamine type N-glycans and that this interaction might make it possible to organize a lectin network involving members of different lectin families.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 0-7 OrganismTaxon denotes Xenopus 262014|8353
T3 139-146 OrganismTaxon denotes Xenopus 262014|8353
T5 222-229 OrganismTaxon denotes Xenopus 262014|8353
T7 264-271 OrganismTaxon denotes Xenopus 262014|8353
T9 1521-1526 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1397-1404 Body_part denotes frontal http://purl.obolibrary.org/obo/UBERON_0000209
T2 1854-1862 Body_part denotes organize http://purl.obolibrary.org/obo/UBERON_0003062|http://purl.obolibrary.org/obo/UBERON_3010449|http://purl.obolibrary.org/obo/UBERON_3010457

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 272-279 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226