PubMed:15668505 / 307-545
Annnotations
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-238 | Sentence | denotes | As these studies concerned sporadic cancer cases, we investigated whether N372H and another common variant located in the 5'-untranslated region (203G > A) of the BRCA2 gene modify breast or ovarian cancer risk in BRCA1 mutation carriers. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 1414 | 36-42 | DiseaseOrPhenotypicFeature | denotes | cancer | MESH:D009369 |
| 1415 | 74-79 | SequenceVariant | denotes | N372H | DBSNP:rs144848 |
| 1416 | 146-154 | SequenceVariant | denotes | 203G > A | g|SUB|G|203|A |
| 1417 | 163-168 | GeneOrGeneProduct | denotes | BRCA2 | NCBIGene:675 |
| 1418 | 181-205 | DiseaseOrPhenotypicFeature | denotes | breast or ovarian cancer | MESH:D001943|MESH:D010051 |
| 1419 | 214-219 | GeneOrGeneProduct | denotes | BRCA1 | NCBIGene:672 |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T5 | 36-42 | DiseaseOrPhenotypicFeature | denotes | cancer | 0004992 |
| T6 | 191-205 | DiseaseOrPhenotypicFeature | denotes | ovarian cancer | 0008170 |
| T7 | 199-205 | DiseaseOrPhenotypicFeature | denotes | cancer | 0004992 |
LitCoin-SeqVar
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 74-79 | SequenceVariant | denotes | N372H |
| T3 | 146-150 | SequenceVariant | denotes | 203G |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 43-48 | GeneOrGeneProduct | denotes | cases |
| T9 | 163-168 | GeneOrGeneProduct | denotes | BRCA2 |
| T10 | 214-219 | GeneOrGeneProduct | denotes | BRCA1 |
| T11 | 220-228 | GeneOrGeneProduct | denotes | mutation |
| T12 | 229-237 | GeneOrGeneProduct | denotes | carriers |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 163-168 | GeneOrGeneProduct | denotes | BRCA2 |
| T7 | 214-219 | GeneOrGeneProduct | denotes | BRCA1 |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T3 | 36-42 | DiseaseOrPhenotypicFeature | denotes | cancer | D009369 |
| T4 | 191-205 | DiseaseOrPhenotypicFeature | denotes | ovarian cancer | D010051 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 163-168 | GeneOrGeneProduct | denotes | BRCA2 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T5 | 191-205 | DiseaseOrPhenotypicFeature | denotes | ovarian cancer | 0008170|0005140 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T3 | 36-42 | DiseaseOrPhenotypicFeature | denotes | cancer | D009369 |
| T4 | 191-205 | DiseaseOrPhenotypicFeature | denotes | ovarian cancer | D010051 |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T3 | 36-42 | DiseaseOrPhenotypicFeature | denotes | cancer | D009369 |
| T4 | 191-205 | DiseaseOrPhenotypicFeature | denotes | ovarian cancer | D010051 |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T3 | 163-168 | GeneOrGeneProduct | denotes | BRCA2 | |
| T4943 | 191-205 | DiseaseOrPhenotypicFeature | denotes | ovarian cancer | D010051 |
| T58027 | 36-42 | DiseaseOrPhenotypicFeature | denotes | cancer | D009369 |
| T92662 | 146-150 | SequenceVariant | denotes | 203G | |
| T11899 | 74-79 | SequenceVariant | denotes | N372H |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 74-79 | ProteinMutation:p|SUB|N|372|H | denotes | N372H |
| T3 | 146-154 | DNAMutation:g|SUB|G|203|A | denotes | 203G > A |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 163-168 | gene:675 | denotes | BRCA2 |
| T1 | 191-205 | disease:C0029925 | denotes | ovarian cancer |
| T2 | 163-168 | gene:675 | denotes | BRCA2 |
| T3 | 191-205 | disease:C1140680 | denotes | ovarian cancer |
| T4 | 214-219 | gene:672 | denotes | BRCA1 |
| T5 | 191-205 | disease:C0029925 | denotes | ovarian cancer |
| T6 | 214-219 | gene:672 | denotes | BRCA1 |
| T7 | 191-205 | disease:C1140680 | denotes | ovarian cancer |
| R1 | T0 | T1 | associated_with | BRCA2,ovarian cancer |
| R2 | T2 | T3 | associated_with | BRCA2,ovarian cancer |
| R3 | T4 | T5 | associated_with | BRCA1,ovarian cancer |
| R4 | T6 | T7 | associated_with | BRCA1,ovarian cancer |