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PubMed:15659616 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 33-44 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T2 33-44 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid
T3 203-214 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T4 203-214 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid
T5 1027-1038 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T6 1027-1038 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid
T7 1310-1321 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T8 1310-1321 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 33-44 Glycan_Motif denotes seminolipid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G95090DW|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G72548RZ
T3 203-214 Glycan_Motif denotes seminolipid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G95090DW|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G72548RZ
T5 1027-1038 Glycan_Motif denotes seminolipid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G95090DW|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G72548RZ
T7 1310-1321 Glycan_Motif denotes seminolipid https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G95090DW|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G72548RZ

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 33-44 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T2 33-44 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid
T3 203-214 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T4 203-214 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid
T5 1027-1038 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T6 1027-1038 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid
T7 1310-1321 https://glytoucan.org/Structures/Glycans/G72548RZ denotes seminolipid
T8 1310-1321 https://glytoucan.org/Structures/Glycans/G95090DW denotes seminolipid

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 1235-1242 http://www.glycoepitope.jp/epitopes/AN0216 denotes Sulph-1

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 0-6 http://purl.obolibrary.org/obo/MAT_0000132 denotes Testis
T2 63-72 http://purl.obolibrary.org/obo/MAT_0000334 denotes germ cell
T3 147-153 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis
T4 390-394 http://purl.obolibrary.org/obo/MAT_0000029 denotes male
T5 543-553 http://purl.obolibrary.org/obo/MAT_0000334 denotes germ cells
T6 669-678 http://purl.obolibrary.org/obo/MAT_0000334 denotes germ cell
T7 826-846 http://purl.obolibrary.org/obo/MAT_0000503 denotes seminiferous tubules
T8 859-865 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis
T9 979-985 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis

ICD10

Id Subject Object Predicate Lexical cue
T1 390-406 http://purl.bioontology.org/ontology/ICD10/N46 denotes male infertility

uniprot-human

Id Subject Object Predicate Lexical cue
T1 290-319 http://www.uniprot.org/uniprot/Q99999 denotes sulfotransferase, cerebroside
T2 338-341 http://www.uniprot.org/uniprot/Q99999 denotes CST
T3 850-853 http://www.uniprot.org/uniprot/Q99999 denotes CST
T4 1262-1265 http://www.uniprot.org/uniprot/Q99999 denotes CST
T5 338-341 http://www.uniprot.org/uniprot/Q9NXC6 denotes CST
T6 850-853 http://www.uniprot.org/uniprot/Q9NXC6 denotes CST
T7 1262-1265 http://www.uniprot.org/uniprot/Q9NXC6 denotes CST

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 290-319 http://www.uniprot.org/uniprot/Q9JHE4 denotes sulfotransferase, cerebroside
T2 362-365 http://www.uniprot.org/uniprot/Q9JHE4 denotes Cst
T3 362-365 http://www.uniprot.org/uniprot/Q9CWL2 denotes Cst

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 68-81 http://purl.bioontology.org/ontology/STY/T043 denotes cell function
T2 529-542 http://purl.bioontology.org/ontology/STY/T043 denotes cell function
T3 548-553 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T4 565-570 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T5 629-637 http://purl.bioontology.org/ontology/STY/T033 denotes findings
T6 897-902 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T7 991-999 http://purl.bioontology.org/ontology/STY/T033 denotes findings
T8 1342-1345 http://purl.bioontology.org/ontology/NCBITAXON/82391 denotes day

GO-BP

Id Subject Object Predicate Lexical cue
T1 85-100 http://purl.obolibrary.org/obo/GO_0007283 denotes spermatogenesis
T2 428-443 http://purl.obolibrary.org/obo/GO_0007283 denotes spermatogenesis
T3 926-941 http://purl.obolibrary.org/obo/GO_0007283 denotes spermatogenesis
T4 175-183 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T5 220-229 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfation
T6 457-466 http://purl.obolibrary.org/obo/GO_0051323 denotes metaphase
T7 480-487 http://purl.obolibrary.org/obo/GO_0007126 denotes meiosis
T8 480-487 http://purl.obolibrary.org/obo/GO_0051321 denotes meiosis
T9 957-964 http://purl.obolibrary.org/obo/GO_0007126 denotes meiosis
T10 957-964 http://purl.obolibrary.org/obo/GO_0051321 denotes meiosis
T11 1351-1354 http://purl.obolibrary.org/obo/GO_0007568 denotes age

GO-MF

Id Subject Object Predicate Lexical cue
T1 1225-1233 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody

GO-CC

Id Subject Object Predicate Lexical cue
T1 68-72 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 529-533 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 548-553 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T4 565-570 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5 897-902 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T6 264-269 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T7 264-278 http://purl.obolibrary.org/obo/GO_0000139 denotes Golgi membrane
T8 264-289 http://purl.obolibrary.org/obo/GO_0030660 denotes Golgi membrane-associated
T9 270-278 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T10 1066-1075 http://purl.obolibrary.org/obo/GO_0016020 denotes membranes
T11 839-846 http://purl.obolibrary.org/obo/GO_0097649 denotes tubules
T12 1059-1075 http://purl.obolibrary.org/obo/GO_0005886 denotes plasma membranes

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 0-6 http://purl.obolibrary.org/obo/UBERON_0000473 denotes Testis
T2 147-153 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis
T3 859-865 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis
T4 979-985 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 0-6 http://purl.obolibrary.org/obo/MAT_0000132 denotes Testis
T2 63-72 http://purl.obolibrary.org/obo/MAT_0000334 denotes germ cell
T3 147-153 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis
T4 390-394 http://purl.obolibrary.org/obo/MAT_0000029 denotes male
T5 543-553 http://purl.obolibrary.org/obo/MAT_0000334 denotes germ cells
T6 669-678 http://purl.obolibrary.org/obo/MAT_0000334 denotes germ cell
T7 826-846 http://purl.obolibrary.org/obo/MAT_0000503 denotes seminiferous tubules
T8 859-865 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis
T9 979-985 http://purl.obolibrary.org/obo/MAT_0000132 denotes testis

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-101 Sentence denotes Testis-specific sulfoglycolipid, seminolipid, is essential for germ cell function in spermatogenesis.
TextSentencer_T2 102-215 Sentence denotes More than 90% of the glycolipid in mammalian testis consists of a unique sulfated glyceroglycolipid, seminolipid.
TextSentencer_T3 216-343 Sentence denotes The sulfation of the molecule is catalyzed by a Golgi membrane-associated sulfotransferase, cerebroside sulfotransferase (CST).
TextSentencer_T4 344-488 Sentence denotes Disruption of the Cst gene in mice results in male infertility due to the arrest of spermatogenesis prior to the metaphase of the first meiosis.
TextSentencer_T5 489-624 Sentence denotes However, the issue of which side of the cell function-germ cells or Sertoli cells-is deteriorated in this mutant mouse remains unknown.
TextSentencer_T6 625-866 Sentence denotes Our findings show that the defect is in the germ cell side, as evidenced by a transplantation analysis, in which wild-type spermatogonia expressing the green fluorescent protein were injected into the seminiferous tubules of CST-null testis.
TextSentencer_T7 867-986 Sentence denotes The transplanted GFP-positive cells generated colonies and spermatogenesis proceeded over meiosis in the mutant testis.
TextSentencer_T8 987-1389 Sentence denotes The findings also clearly show that the seminolipid is expressed on the plasma membranes of spermatogonia, spermatocytes, spermatids, and spermatozoa, as evidenced by the immunostaining of wild-type testes using an anti-sulfogalactolipid antibody, Sulph-1 in comparison with CST-null testes as a negative control, and that seminolipid appears as early as day 8 of age, when Type B spermatogonia emerge.
T1 0-101 Sentence denotes Testis-specific sulfoglycolipid, seminolipid, is essential for germ cell function in spermatogenesis.
T2 102-215 Sentence denotes More than 90% of the glycolipid in mammalian testis consists of a unique sulfated glyceroglycolipid, seminolipid.
T3 216-343 Sentence denotes The sulfation of the molecule is catalyzed by a Golgi membrane-associated sulfotransferase, cerebroside sulfotransferase (CST).
T4 344-488 Sentence denotes Disruption of the Cst gene in mice results in male infertility due to the arrest of spermatogenesis prior to the metaphase of the first meiosis.
T5 489-624 Sentence denotes However, the issue of which side of the cell function-germ cells or Sertoli cells-is deteriorated in this mutant mouse remains unknown.
T6 625-866 Sentence denotes Our findings show that the defect is in the germ cell side, as evidenced by a transplantation analysis, in which wild-type spermatogonia expressing the green fluorescent protein were injected into the seminiferous tubules of CST-null testis.
T7 867-986 Sentence denotes The transplanted GFP-positive cells generated colonies and spermatogenesis proceeded over meiosis in the mutant testis.
T8 987-1389 Sentence denotes The findings also clearly show that the seminolipid is expressed on the plasma membranes of spermatogonia, spermatocytes, spermatids, and spermatozoa, as evidenced by the immunostaining of wild-type testes using an anti-sulfogalactolipid antibody, Sulph-1 in comparison with CST-null testes as a negative control, and that seminolipid appears as early as day 8 of age, when Type B spermatogonia emerge.
T1 0-101 Sentence denotes Testis-specific sulfoglycolipid, seminolipid, is essential for germ cell function in spermatogenesis.
T2 102-215 Sentence denotes More than 90% of the glycolipid in mammalian testis consists of a unique sulfated glyceroglycolipid, seminolipid.
T3 216-343 Sentence denotes The sulfation of the molecule is catalyzed by a Golgi membrane-associated sulfotransferase, cerebroside sulfotransferase (CST).
T4 344-488 Sentence denotes Disruption of the Cst gene in mice results in male infertility due to the arrest of spermatogenesis prior to the metaphase of the first meiosis.
T5 489-624 Sentence denotes However, the issue of which side of the cell function-germ cells or Sertoli cells-is deteriorated in this mutant mouse remains unknown.
T6 625-866 Sentence denotes Our findings show that the defect is in the germ cell side, as evidenced by a transplantation analysis, in which wild-type spermatogonia expressing the green fluorescent protein were injected into the seminiferous tubules of CST-null testis.
T7 867-986 Sentence denotes The transplanted GFP-positive cells generated colonies and spermatogenesis proceeded over meiosis in the mutant testis.
T8 987-1389 Sentence denotes The findings also clearly show that the seminolipid is expressed on the plasma membranes of spermatogonia, spermatocytes, spermatids, and spermatozoa, as evidenced by the immunostaining of wild-type testes using an anti-sulfogalactolipid antibody, Sulph-1 in comparison with CST-null testes as a negative control, and that seminolipid appears as early as day 8 of age, when Type B spermatogonia emerge.

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 1235-1242 http://www.glycoepitope.jp/epitopes/AN0216 denotes Sulph-1

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 0-6 http://purl.obolibrary.org/obo/UBERON_0000473 denotes Testis
PD-UBERON-AE-B_T2 147-153 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis
PD-UBERON-AE-B_T3 859-865 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis
PD-UBERON-AE-B_T4 979-985 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 390-406 Disease denotes male infertility http://purl.obolibrary.org/obo/MONDO_0005372
T2 418-443 Disease denotes arrest of spermatogenesis http://purl.obolibrary.org/obo/MONDO_0010052

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 374-378 OrganismTaxon denotes mice 10088
T2 602-607 OrganismTaxon denotes mouse 10088|10090

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 0-6 Body_part denotes Testis http://purl.obolibrary.org/obo/UBERON_0000473
T2 63-72 Body_part denotes germ cell http://purl.obolibrary.org/obo/CL_0000586
T3 147-153 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T4 264-278 Body_part denotes Golgi membrane http://purl.obolibrary.org/obo/GO_0000139
T5 543-553 Body_part denotes germ cells http://purl.obolibrary.org/obo/CL_0000586
T6 557-570 Body_part denotes Sertoli cells http://purl.obolibrary.org/obo/CL_0000216
T7 669-678 Body_part denotes germ cell http://purl.obolibrary.org/obo/CL_0000586
T8 826-846 Body_part denotes seminiferous tubules http://purl.obolibrary.org/obo/UBERON_0001343
T9 859-865 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T10 979-985 Body_part denotes testis http://purl.obolibrary.org/obo/UBERON_0000473
T11 1059-1075 Body_part denotes plasma membranes http://purl.obolibrary.org/obo/GO_0005886
T12 1094-1107 Body_part denotes spermatocytes http://purl.obolibrary.org/obo/CL_0000017
T13 1109-1119 Body_part denotes spermatids http://purl.obolibrary.org/obo/CL_0000018

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 0-6 Body_part denotes Testis http://purl.obolibrary.org/obo/MAT_0000132
T2 63-72 Body_part denotes germ cell http://purl.obolibrary.org/obo/MAT_0000334
T3 147-153 Body_part denotes testis http://purl.obolibrary.org/obo/MAT_0000132
T4 390-394 Body_part denotes male http://purl.obolibrary.org/obo/MAT_0000029
T5 543-553 Body_part denotes germ cells http://purl.obolibrary.org/obo/MAT_0000334
T6 669-678 Body_part denotes germ cell http://purl.obolibrary.org/obo/MAT_0000334
T7 826-846 Body_part denotes seminiferous tubules http://purl.obolibrary.org/obo/MAT_0000503
T8 859-865 Body_part denotes testis http://purl.obolibrary.org/obo/MAT_0000132
T9 979-985 Body_part denotes testis http://purl.obolibrary.org/obo/MAT_0000132

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 390-406 Phenotype denotes male infertility HP:0003251

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 63-72 Cell denotes germ cell http://purl.obolibrary.org/obo/CL:0000586
T2 543-553 Cell denotes germ cells http://purl.obolibrary.org/obo/CL:0000586
T3 557-570 Cell denotes Sertoli cells http://purl.obolibrary.org/obo/CL:0000216
T4 669-678 Cell denotes germ cell http://purl.obolibrary.org/obo/CL:0000586
T5 1094-1107 Cell denotes spermatocytes http://purl.obolibrary.org/obo/CL:0000017
T6 1109-1119 Cell denotes spermatids http://purl.obolibrary.org/obo/CL:0000018