PubMed:15604091
Annnotations
Glycan-Motif
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 719-737 | https://glytoucan.org/Structures/Glycans/G08371CD | denotes | sialyl-Tn antigens |
T2 | 719-737 | https://glytoucan.org/Structures/Glycans/G36123IU | denotes | sialyl-Tn antigens |
T3 | 747-756 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
T4 | 806-815 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
T5 | 976-994 | https://glytoucan.org/Structures/Glycans/G08371CD | denotes | sialyl-Tn antigens |
T6 | 976-994 | https://glytoucan.org/Structures/Glycans/G36123IU | denotes | sialyl-Tn antigens |
T7 | 1116-1125 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
T8 | 1426-1435 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
GlyCosmos6-Glycan-Motif-Image
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 719-737 | Glycan_Motif | denotes | sialyl-Tn antigens | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G36123IU|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G08371CD |
T3 | 747-756 | Glycan_Motif | denotes | T antigen | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO |
T4 | 806-815 | Glycan_Motif | denotes | T antigen | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO |
T5 | 976-994 | Glycan_Motif | denotes | sialyl-Tn antigens | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G36123IU|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G08371CD |
T7 | 1116-1125 | Glycan_Motif | denotes | T antigen | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO |
T8 | 1426-1435 | Glycan_Motif | denotes | T antigen | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO |
Glycosmos6-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 747-756 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
T2 | 806-815 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
T3 | 1116-1125 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
T4 | 1426-1435 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
TextSentencer_T1 | 0-110 | Sentence | denotes | Thomsen-Friedenreich antigen expression in gastric carcinomas is associated with MUC1 mucin VNTR polymorphism. |
TextSentencer_T2 | 111-208 | Sentence | denotes | Aberrant glycosylation of mucins is a common phenomenon associated with oncogenic transformation. |
TextSentencer_T3 | 209-411 | Sentence | denotes | We investigated the association between expression of the tumor-associated antigens T, Tn, and sialyl-Tn and polymorphism in the length of the MUC1 mucin tandem repeat in a series of gastric carcinomas. |
TextSentencer_T4 | 412-664 | Sentence | denotes | We further evaluated the relevance of MUC1 tandem repeat length on the expression of these tumor-associated carbohydrate antigens (TACAs) using a gastric carcinoma cell line model expressing recombinant MUC1 constructs carrying 0, 3, 9, and 42 repeats. |
TextSentencer_T5 | 665-787 | Sentence | denotes | Gastric carcinomas showed a high prevalence of Tn and sialyl-Tn antigens, whereas T antigen was less frequently expressed. |
TextSentencer_T6 | 788-925 | Sentence | denotes | The expression of T antigen was significantly higher in gastric carcinomas from patients homozygous for MUC1 large tandem repeat alleles. |
TextSentencer_T7 | 926-995 | Sentence | denotes | No significant associations were found for Tn and sialyl-Tn antigens. |
TextSentencer_T8 | 996-1186 | Sentence | denotes | This novel association was reinforced by the gastric carcinoma cell line model experiments, where de novo expression of T antigen was detected in clones transfected with larger VNTR regions. |
TextSentencer_T9 | 1187-1436 | Sentence | denotes | Our results indicate that polymorphism in the MUC1 tandem repeat influences the expression of TACAs in gastric cancer cells and may therefore allow the identification of subgroups of patients that develop more aggressive tumors expressing T antigen. |
T1 | 0-110 | Sentence | denotes | Thomsen-Friedenreich antigen expression in gastric carcinomas is associated with MUC1 mucin VNTR polymorphism. |
T2 | 111-208 | Sentence | denotes | Aberrant glycosylation of mucins is a common phenomenon associated with oncogenic transformation. |
T3 | 209-411 | Sentence | denotes | We investigated the association between expression of the tumor-associated antigens T, Tn, and sialyl-Tn and polymorphism in the length of the MUC1 mucin tandem repeat in a series of gastric carcinomas. |
T4 | 412-664 | Sentence | denotes | We further evaluated the relevance of MUC1 tandem repeat length on the expression of these tumor-associated carbohydrate antigens (TACAs) using a gastric carcinoma cell line model expressing recombinant MUC1 constructs carrying 0, 3, 9, and 42 repeats. |
T5 | 665-787 | Sentence | denotes | Gastric carcinomas showed a high prevalence of Tn and sialyl-Tn antigens, whereas T antigen was less frequently expressed. |
T6 | 788-925 | Sentence | denotes | The expression of T antigen was significantly higher in gastric carcinomas from patients homozygous for MUC1 large tandem repeat alleles. |
T7 | 926-995 | Sentence | denotes | No significant associations were found for Tn and sialyl-Tn antigens. |
T8 | 996-1186 | Sentence | denotes | This novel association was reinforced by the gastric carcinoma cell line model experiments, where de novo expression of T antigen was detected in clones transfected with larger VNTR regions. |
T9 | 1187-1436 | Sentence | denotes | Our results indicate that polymorphism in the MUC1 tandem repeat influences the expression of TACAs in gastric cancer cells and may therefore allow the identification of subgroups of patients that develop more aggressive tumors expressing T antigen. |
T1 | 0-110 | Sentence | denotes | Thomsen-Friedenreich antigen expression in gastric carcinomas is associated with MUC1 mucin VNTR polymorphism. |
T2 | 111-208 | Sentence | denotes | Aberrant glycosylation of mucins is a common phenomenon associated with oncogenic transformation. |
T3 | 209-411 | Sentence | denotes | We investigated the association between expression of the tumor-associated antigens T, Tn, and sialyl-Tn and polymorphism in the length of the MUC1 mucin tandem repeat in a series of gastric carcinomas. |
T4 | 412-664 | Sentence | denotes | We further evaluated the relevance of MUC1 tandem repeat length on the expression of these tumor-associated carbohydrate antigens (TACAs) using a gastric carcinoma cell line model expressing recombinant MUC1 constructs carrying 0, 3, 9, and 42 repeats. |
T5 | 665-787 | Sentence | denotes | Gastric carcinomas showed a high prevalence of Tn and sialyl-Tn antigens, whereas T antigen was less frequently expressed. |
T6 | 788-925 | Sentence | denotes | The expression of T antigen was significantly higher in gastric carcinomas from patients homozygous for MUC1 large tandem repeat alleles. |
T7 | 926-995 | Sentence | denotes | No significant associations were found for Tn and sialyl-Tn antigens. |
T8 | 996-1186 | Sentence | denotes | This novel association was reinforced by the gastric carcinoma cell line model experiments, where de novo expression of T antigen was detected in clones transfected with larger VNTR regions. |
T9 | 1187-1436 | Sentence | denotes | Our results indicate that polymorphism in the MUC1 tandem repeat influences the expression of TACAs in gastric cancer cells and may therefore allow the identification of subgroups of patients that develop more aggressive tumors expressing T antigen. |
GlyCosmos6-Glycan-Motif-Structure
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 719-737 | https://glytoucan.org/Structures/Glycans/G08371CD | denotes | sialyl-Tn antigens |
T2 | 719-737 | https://glytoucan.org/Structures/Glycans/G36123IU | denotes | sialyl-Tn antigens |
T3 | 747-756 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
T4 | 806-815 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
T5 | 976-994 | https://glytoucan.org/Structures/Glycans/G08371CD | denotes | sialyl-Tn antigens |
T6 | 976-994 | https://glytoucan.org/Structures/Glycans/G36123IU | denotes | sialyl-Tn antigens |
T7 | 1116-1125 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
T8 | 1426-1435 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T antigen |
uniprot-human
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 81-85 | http://www.uniprot.org/uniprot/Q9BXA4 | denotes | MUC1 |
T2 | 352-356 | http://www.uniprot.org/uniprot/Q9BXA4 | denotes | MUC1 |
T3 | 450-454 | http://www.uniprot.org/uniprot/Q9BXA4 | denotes | MUC1 |
T4 | 615-619 | http://www.uniprot.org/uniprot/Q9BXA4 | denotes | MUC1 |
T5 | 892-896 | http://www.uniprot.org/uniprot/Q9BXA4 | denotes | MUC1 |
T6 | 1233-1237 | http://www.uniprot.org/uniprot/Q9BXA4 | denotes | MUC1 |
T7 | 267-292 | http://www.uniprot.org/uniprot/Q08380 | denotes | tumor-associated antigens |
T8 | 267-292 | http://www.uniprot.org/uniprot/P30408 | denotes | tumor-associated antigens |
GlycoBiology-NCBITAXON
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 51-61 | http://purl.bioontology.org/ontology/NCBITAXON/166034 | denotes | carcinomas |
T2 | 97-109 | http://purl.bioontology.org/ontology/NCBITAXON/991903 | denotes | polymorphism |
T3 | 97-109 | http://purl.bioontology.org/ontology/NCBITAXON/60540 | denotes | polymorphism |
T4 | 111-119 | http://purl.bioontology.org/ontology/NCBITAXON/317910 | denotes | Aberrant |
T5 | 318-330 | http://purl.bioontology.org/ontology/NCBITAXON/60540 | denotes | polymorphism |
T6 | 318-330 | http://purl.bioontology.org/ontology/NCBITAXON/991903 | denotes | polymorphism |
T7 | 400-410 | http://purl.bioontology.org/ontology/NCBITAXON/166034 | denotes | carcinomas |
T8 | 566-575 | http://purl.bioontology.org/ontology/NCBITAXON/166034 | denotes | carcinoma |
T9 | 673-683 | http://purl.bioontology.org/ontology/NCBITAXON/166034 | denotes | carcinomas |
T10 | 852-862 | http://purl.bioontology.org/ontology/NCBITAXON/166034 | denotes | carcinomas |
T11 | 1049-1058 | http://purl.bioontology.org/ontology/NCBITAXON/166034 | denotes | carcinoma |
T12 | 1213-1225 | http://purl.bioontology.org/ontology/NCBITAXON/60540 | denotes | polymorphism |
T13 | 1213-1225 | http://purl.bioontology.org/ontology/NCBITAXON/991903 | denotes | polymorphism |
T14 | 1298-1304 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
T15 | 1305-1310 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 120-133 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
T2 | 304-310 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialyl |
T3 | 719-725 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialyl |
T4 | 976-982 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialyl |
T5 | 1384-1391 | http://purl.obolibrary.org/obo/GO_0032502 | denotes | develop |
T6 | 1397-1407 | http://purl.obolibrary.org/obo/GO_0002118 | denotes | aggressive |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 576-580 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T2 | 1059-1063 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T3 | 1305-1310 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
EDAM-topics
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 21-28 | http://edamontology.org/topic_2830 | denotes | antigen |
T2 | 92-96 | http://edamontology.org/topic_2885 | denotes | VNTR |
T3 | 92-96 | http://edamontology.org/topic_2867 | denotes | VNTR |
T4 | 97-109 | http://edamontology.org/topic_0199 | denotes | polymorphism |
T5 | 284-292 | http://edamontology.org/topic_2830 | denotes | antigens |
T6 | 318-330 | http://edamontology.org/topic_0199 | denotes | polymorphism |
T7 | 520-532 | http://edamontology.org/topic_0152 | denotes | carbohydrate |
T8 | 533-541 | http://edamontology.org/topic_2830 | denotes | antigens |
T9 | 729-737 | http://edamontology.org/topic_2830 | denotes | antigens |
T10 | 749-756 | http://edamontology.org/topic_2830 | denotes | antigen |
T11 | 777-802 | http://edamontology.org/topic_0203 | denotes | expressed. The expression |
T12 | 808-815 | http://edamontology.org/topic_2830 | denotes | antigen |
T13 | 986-994 | http://edamontology.org/topic_2830 | denotes | antigens |
T14 | 1118-1125 | http://edamontology.org/topic_2830 | denotes | antigen |
T15 | 1173-1177 | http://edamontology.org/topic_2885 | denotes | VNTR |
T16 | 1173-1177 | http://edamontology.org/topic_2867 | denotes | VNTR |
T17 | 1213-1225 | http://edamontology.org/topic_0199 | denotes | polymorphism |
T18 | 1298-1304 | http://edamontology.org/topic_2640 | denotes | cancer |
T19 | 1428-1435 | http://edamontology.org/topic_2830 | denotes | antigen |
EDAM-DFO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 620-630 | http://edamontology.org/operation_3429 | denotes | constructs |
T2 | 1130-1138 | http://edamontology.org/operation_2423 | denotes | detected |
DisGeNET5_gene_disease
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
15604091-8#46#50#gene4582 | 1233-1237 | gene4582 | denotes | MUC1 |
15604091-8#103#117#diseaseC0024623 | 1290-1304 | diseaseC0024623 | denotes | gastric cancer |
15604091-8#103#117#diseaseC0699791 | 1290-1304 | diseaseC0699791 | denotes | gastric cancer |
46#50#gene4582103#117#diseaseC0024623 | 15604091-8#46#50#gene4582 | 15604091-8#103#117#diseaseC0024623 | associated_with | MUC1,gastric cancer |
46#50#gene4582103#117#diseaseC0699791 | 15604091-8#46#50#gene4582 | 15604091-8#103#117#diseaseC0699791 | associated_with | MUC1,gastric cancer |
Lectin
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
Lectin_T1 | 296-298 | https://acgg.asia/db/lfdb/LfDB0021 | denotes | Tn |
Lectin_T2 | 311-313 | https://acgg.asia/db/lfdb/LfDB0021 | denotes | Tn |
Lectin_T3 | 712-714 | https://acgg.asia/db/lfdb/LfDB0021 | denotes | Tn |
Lectin_T4 | 726-728 | https://acgg.asia/db/lfdb/LfDB0021 | denotes | Tn |
Lectin_T5 | 969-971 | https://acgg.asia/db/lfdb/LfDB0021 | denotes | Tn |
Lectin_T6 | 983-985 | https://acgg.asia/db/lfdb/LfDB0021 | denotes | Tn |
GlycoBiology-Epitope
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
PD-GlycoEpitope-B_T1 | 747-756 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
PD-GlycoEpitope-B_T2 | 806-815 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
PD-GlycoEpitope-B_T3 | 1116-1125 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
PD-GlycoEpitope-B_T4 | 1426-1435 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T antigen |
PD-GlycoEpitope-B_T5 | 726-737 | http://www.glycoepitope.jp/epitopes/EP0021 | denotes | Tn antigens |
PD-GlycoEpitope-B_T6 | 983-994 | http://www.glycoepitope.jp/epitopes/EP0021 | denotes | Tn antigens |
PD-GlycoEpitope-B_T7 | 719-737 | http://www.glycoepitope.jp/epitopes/EP0022 | denotes | sialyl-Tn antigens |
PD-GlycoEpitope-B_T8 | 976-994 | http://www.glycoepitope.jp/epitopes/EP0022 | denotes | sialyl-Tn antigens |
DisGeNET
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T0 | 81-85 | gene:4582 | denotes | MUC1 |
T1 | 51-61 | disease:C0007097 | denotes | carcinomas |
T2 | 892-896 | gene:4582 | denotes | MUC1 |
T3 | 852-862 | disease:C0007097 | denotes | carcinomas |
T4 | 1233-1237 | gene:4582 | denotes | MUC1 |
T5 | 1290-1304 | disease:C0024623 | denotes | gastric cancer |
T6 | 1233-1237 | gene:4582 | denotes | MUC1 |
T7 | 1290-1304 | disease:C0699791 | denotes | gastric cancer |
R1 | T0 | T1 | associated_with | MUC1,carcinomas |
R2 | T2 | T3 | associated_with | MUC1,carcinomas |
R3 | T4 | T5 | associated_with | MUC1,gastric cancer |
R4 | T6 | T7 | associated_with | MUC1,gastric cancer |
HP-phenotype
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 51-61 | Phenotype | denotes | carcinomas | HP:0030731 |
T2 | 267-272 | Phenotype | denotes | tumor | HP:0002664 |
T3 | 400-410 | Phenotype | denotes | carcinomas | HP:0030731 |
T4 | 503-508 | Phenotype | denotes | tumor | HP:0002664 |
T5 | 566-575 | Phenotype | denotes | carcinoma | HP:0030731 |
T6 | 673-683 | Phenotype | denotes | carcinomas | HP:0030731 |
T7 | 852-862 | Phenotype | denotes | carcinomas | HP:0030731 |
T8 | 1049-1058 | Phenotype | denotes | carcinoma | HP:0030731 |
T9 | 1290-1304 | Phenotype | denotes | gastric cancer | HP:0012126 |
T10 | 1397-1407 | Phenotype | denotes | aggressive | HP:0000718 |
mondo_disease
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 43-61 | Disease | denotes | gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T2 | 267-272 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
T3 | 392-410 | Disease | denotes | gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T4 | 503-508 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
T5 | 558-575 | Disease | denotes | gastric carcinoma | http://purl.obolibrary.org/obo/MONDO_0004950 |
T6 | 665-683 | Disease | denotes | Gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T7 | 844-862 | Disease | denotes | gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T8 | 1041-1058 | Disease | denotes | gastric carcinoma | http://purl.obolibrary.org/obo/MONDO_0004950 |
T9 | 1290-1304 | Disease | denotes | gastric cancer | http://purl.obolibrary.org/obo/MONDO_0001056 |
T10 | 1408-1414 | Disease | denotes | tumors | http://purl.obolibrary.org/obo/MONDO_0005070 |
Glycan-GlyCosmos
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 747-756 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
T2 | 806-815 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
T3 | 1116-1125 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
T4 | 1426-1435 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
GlyCosmos-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
---|---|---|---|---|---|
T1 | 747-756 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
T2 | 806-815 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
T3 | 1116-1125 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
T4 | 1426-1435 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
GlyCosmos15-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 51-61 | Phenotype | denotes | carcinomas | HP:0030731 |
T2 | 267-272 | Phenotype | denotes | tumor | HP:0002664 |
T3 | 400-410 | Phenotype | denotes | carcinomas | HP:0030731 |
T4 | 503-508 | Phenotype | denotes | tumor | HP:0002664 |
T5 | 566-575 | Phenotype | denotes | carcinoma | HP:0030731 |
T6 | 673-683 | Phenotype | denotes | carcinomas | HP:0030731 |
T7 | 852-862 | Phenotype | denotes | carcinomas | HP:0030731 |
T8 | 1049-1058 | Phenotype | denotes | carcinoma | HP:0030731 |
T9 | 1290-1304 | Phenotype | denotes | gastric cancer | HP:0012126 |
GlyCosmos15-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 43-61 | Disease | denotes | gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T2 | 267-272 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
T3 | 392-410 | Disease | denotes | gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T4 | 503-508 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
T5 | 558-575 | Disease | denotes | gastric carcinoma | http://purl.obolibrary.org/obo/MONDO_0004950 |
T6 | 665-683 | Disease | denotes | Gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T7 | 844-862 | Disease | denotes | gastric carcinomas | http://purl.obolibrary.org/obo/MONDO_0004950 |
T8 | 1041-1058 | Disease | denotes | gastric carcinoma | http://purl.obolibrary.org/obo/MONDO_0004950 |
T9 | 1290-1304 | Disease | denotes | gastric cancer | http://purl.obolibrary.org/obo/MONDO_0001056 |
T10 | 1408-1414 | Disease | denotes | tumors | http://purl.obolibrary.org/obo/MONDO_0005070 |
GlyCosmos15-CL
Id | Subject | Object | Predicate | Lexical cue | cl_id |
---|---|---|---|---|---|
T1 | 1298-1310 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
TextSentencer_T1 | 0-110 | Sentence | denotes | Thomsen-Friedenreich antigen expression in gastric carcinomas is associated with MUC1 mucin VNTR polymorphism. |
TextSentencer_T2 | 111-208 | Sentence | denotes | Aberrant glycosylation of mucins is a common phenomenon associated with oncogenic transformation. |
TextSentencer_T3 | 209-411 | Sentence | denotes | We investigated the association between expression of the tumor-associated antigens T, Tn, and sialyl-Tn and polymorphism in the length of the MUC1 mucin tandem repeat in a series of gastric carcinomas. |
TextSentencer_T4 | 412-664 | Sentence | denotes | We further evaluated the relevance of MUC1 tandem repeat length on the expression of these tumor-associated carbohydrate antigens (TACAs) using a gastric carcinoma cell line model expressing recombinant MUC1 constructs carrying 0, 3, 9, and 42 repeats. |
TextSentencer_T5 | 665-787 | Sentence | denotes | Gastric carcinomas showed a high prevalence of Tn and sialyl-Tn antigens, whereas T antigen was less frequently expressed. |
TextSentencer_T6 | 788-925 | Sentence | denotes | The expression of T antigen was significantly higher in gastric carcinomas from patients homozygous for MUC1 large tandem repeat alleles. |
TextSentencer_T7 | 926-995 | Sentence | denotes | No significant associations were found for Tn and sialyl-Tn antigens. |
TextSentencer_T8 | 996-1186 | Sentence | denotes | This novel association was reinforced by the gastric carcinoma cell line model experiments, where de novo expression of T antigen was detected in clones transfected with larger VNTR regions. |
TextSentencer_T9 | 1187-1436 | Sentence | denotes | Our results indicate that polymorphism in the MUC1 tandem repeat influences the expression of TACAs in gastric cancer cells and may therefore allow the identification of subgroups of patients that develop more aggressive tumors expressing T antigen. |
T1 | 0-110 | Sentence | denotes | Thomsen-Friedenreich antigen expression in gastric carcinomas is associated with MUC1 mucin VNTR polymorphism. |
T2 | 111-208 | Sentence | denotes | Aberrant glycosylation of mucins is a common phenomenon associated with oncogenic transformation. |
T3 | 209-411 | Sentence | denotes | We investigated the association between expression of the tumor-associated antigens T, Tn, and sialyl-Tn and polymorphism in the length of the MUC1 mucin tandem repeat in a series of gastric carcinomas. |
T4 | 412-664 | Sentence | denotes | We further evaluated the relevance of MUC1 tandem repeat length on the expression of these tumor-associated carbohydrate antigens (TACAs) using a gastric carcinoma cell line model expressing recombinant MUC1 constructs carrying 0, 3, 9, and 42 repeats. |
T5 | 665-787 | Sentence | denotes | Gastric carcinomas showed a high prevalence of Tn and sialyl-Tn antigens, whereas T antigen was less frequently expressed. |
T6 | 788-925 | Sentence | denotes | The expression of T antigen was significantly higher in gastric carcinomas from patients homozygous for MUC1 large tandem repeat alleles. |
T7 | 926-995 | Sentence | denotes | No significant associations were found for Tn and sialyl-Tn antigens. |
T8 | 996-1186 | Sentence | denotes | This novel association was reinforced by the gastric carcinoma cell line model experiments, where de novo expression of T antigen was detected in clones transfected with larger VNTR regions. |
T9 | 1187-1436 | Sentence | denotes | Our results indicate that polymorphism in the MUC1 tandem repeat influences the expression of TACAs in gastric cancer cells and may therefore allow the identification of subgroups of patients that develop more aggressive tumors expressing T antigen. |
T1 | 0-110 | Sentence | denotes | Thomsen-Friedenreich antigen expression in gastric carcinomas is associated with MUC1 mucin VNTR polymorphism. |
T2 | 111-208 | Sentence | denotes | Aberrant glycosylation of mucins is a common phenomenon associated with oncogenic transformation. |
T3 | 209-411 | Sentence | denotes | We investigated the association between expression of the tumor-associated antigens T, Tn, and sialyl-Tn and polymorphism in the length of the MUC1 mucin tandem repeat in a series of gastric carcinomas. |
T4 | 412-664 | Sentence | denotes | We further evaluated the relevance of MUC1 tandem repeat length on the expression of these tumor-associated carbohydrate antigens (TACAs) using a gastric carcinoma cell line model expressing recombinant MUC1 constructs carrying 0, 3, 9, and 42 repeats. |
T5 | 665-787 | Sentence | denotes | Gastric carcinomas showed a high prevalence of Tn and sialyl-Tn antigens, whereas T antigen was less frequently expressed. |
T6 | 788-925 | Sentence | denotes | The expression of T antigen was significantly higher in gastric carcinomas from patients homozygous for MUC1 large tandem repeat alleles. |
T7 | 926-995 | Sentence | denotes | No significant associations were found for Tn and sialyl-Tn antigens. |
T8 | 996-1186 | Sentence | denotes | This novel association was reinforced by the gastric carcinoma cell line model experiments, where de novo expression of T antigen was detected in clones transfected with larger VNTR regions. |
T9 | 1187-1436 | Sentence | denotes | Our results indicate that polymorphism in the MUC1 tandem repeat influences the expression of TACAs in gastric cancer cells and may therefore allow the identification of subgroups of patients that develop more aggressive tumors expressing T antigen. |
GlyCosmos15-Sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-110 | Sentence | denotes | Thomsen-Friedenreich antigen expression in gastric carcinomas is associated with MUC1 mucin VNTR polymorphism. |
T2 | 111-208 | Sentence | denotes | Aberrant glycosylation of mucins is a common phenomenon associated with oncogenic transformation. |
T3 | 209-411 | Sentence | denotes | We investigated the association between expression of the tumor-associated antigens T, Tn, and sialyl-Tn and polymorphism in the length of the MUC1 mucin tandem repeat in a series of gastric carcinomas. |
T4 | 412-664 | Sentence | denotes | We further evaluated the relevance of MUC1 tandem repeat length on the expression of these tumor-associated carbohydrate antigens (TACAs) using a gastric carcinoma cell line model expressing recombinant MUC1 constructs carrying 0, 3, 9, and 42 repeats. |
T5 | 665-787 | Sentence | denotes | Gastric carcinomas showed a high prevalence of Tn and sialyl-Tn antigens, whereas T antigen was less frequently expressed. |
T6 | 788-925 | Sentence | denotes | The expression of T antigen was significantly higher in gastric carcinomas from patients homozygous for MUC1 large tandem repeat alleles. |
T7 | 926-995 | Sentence | denotes | No significant associations were found for Tn and sialyl-Tn antigens. |
T8 | 996-1186 | Sentence | denotes | This novel association was reinforced by the gastric carcinoma cell line model experiments, where de novo expression of T antigen was detected in clones transfected with larger VNTR regions. |
T9 | 1187-1436 | Sentence | denotes | Our results indicate that polymorphism in the MUC1 tandem repeat influences the expression of TACAs in gastric cancer cells and may therefore allow the identification of subgroups of patients that develop more aggressive tumors expressing T antigen. |
GlyCosmos15-Glycan
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 747-756 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
T2 | 806-815 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
T3 | 1116-1125 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
T4 | 1426-1435 | Glycan | denotes | T antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
GlyCosmos15-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
---|---|---|---|---|---|
T1 | 747-756 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
T2 | 806-815 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
T3 | 1116-1125 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
T4 | 1426-1435 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
CL-cell
Id | Subject | Object | Predicate | Lexical cue | cl_id |
---|---|---|---|---|---|
T1 | 1298-1310 | Cell | denotes | cancer cells | http://purl.obolibrary.org/obo/CL:0001064 |