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LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
1206 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia MESH:D000860
1207 11-24 DiseaseOrPhenotypicFeature denotes renal disease MESH:D007674
1208 30-41 DiseaseOrPhenotypicFeature denotes proteinuria MESH:D011507
1209 60-72 DiseaseOrPhenotypicFeature denotes hypertension MESH:D006973
1210 247-254 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1211 290-297 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1212 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor NCBIGene:83785
1213 404-411 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1214 431-434 OrganismTaxon denotes rat NCBITaxon:10116
1215 509-516 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1216 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney MESH:D007674
1217 600-607 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1218 615-640 ChemicalEntity denotes puromycin aminonucleoside MESH:D011692
1219 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome MESH:D009404
1220 692-699 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1221 747-754 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1222 857-882 ChemicalEntity denotes puromycin aminonucleoside MESH:D011692
1223 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor NCBIGene:83785
1224 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1225 1134-1159 DiseaseOrPhenotypicFeature denotes tubulointerstitial injury MESH:D007674
1226 1264-1268 GeneOrGeneProduct denotes ED-1 NCBIGene:302424
1227 1292-1296 ChemicalEntity denotes dUTP MESH:C027078
1228 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic MESH:D000860
1229 1466-1473 DiseaseOrPhenotypicFeature denotes hypoxia MESH:D000860
1230 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases MESH:D007674

LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 431-434 OrganismTaxon denotes rat NCBItxid:10116|NCBItxid:10114

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-73 Sentence denotes Hypoxia in renal disease with proteinuria and/or glomerular hypertension.
T2 74-212 Sentence denotes Despite the increasing need to identify and quantify tissue oxygenation at the cellular level, relatively few methods have been available.
T3 213-435 Sentence denotes In this study, we developed a new hypoxia-responsive reporter vector using a hypoxia-responsive element of the 5' vascular endothelial growth factor untranslated region and generated a novel hypoxia-sensing transgenic rat.
T4 436-540 Sentence denotes We then applied this animal model to the detection of tubulointerstitial hypoxia in the diseased kidney.
T5 541-728 Sentence denotes With this model, we were able to identify diffuse cortical hypoxia in the puromycin aminonucleoside-induced nephrotic syndrome and focal and segmental hypoxia in the remnant kidney model.
T6 729-1064 Sentence denotes Expression of the hypoxia-responsive transgene increased throughout the observation period, reaching 2.2-fold at 2 weeks in the puromycin aminonucleoside model and 2.6-fold at 4 weeks in the remnant kidney model, whereas that of vascular endothelial growth factor showed a mild decrease, reflecting distinct behaviors of the two genes.
T7 1065-1175 Sentence denotes The degree of hypoxia showed a positive correlation with microscopic tubulointerstitial injury in both models.
T8 1176-1386 Sentence denotes Finally, we identified the localization of proliferating cell nuclear antigen-positive, ED-1-positive, and terminal dUTP nick-end labeled-positive cells in the hypoxic cortical area in the remnant kidney model.
T9 1387-1510 Sentence denotes We propose here a possible pathological tie between chronic tubulointerstitial hypoxia and progressive glomerular diseases.

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 30-41 DiseaseOrPhenotypicFeature denotes proteinuria 0003634
T2 336-347 DiseaseOrPhenotypicFeature denotes endothelial 0015292
T3 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome 0005377
T4 967-978 DiseaseOrPhenotypicFeature denotes endothelial 0015292
T5 1153-1159 DiseaseOrPhenotypicFeature denotes injury 0021178
T6 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases 0019722

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 60-72 GeneOrGeneProduct denotes hypertension
T2 184-191 GeneOrGeneProduct denotes methods
T3 202-211 GeneOrGeneProduct denotes available
T4 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T5 398-403 GeneOrGeneProduct denotes novel
T6 412-419 GeneOrGeneProduct denotes sensing
T7 533-539 GeneOrGeneProduct denotes kidney
T8 641-648 GeneOrGeneProduct denotes induced
T9 659-667 GeneOrGeneProduct denotes syndrome
T10 707-714 GeneOrGeneProduct denotes remnant
T11 715-721 GeneOrGeneProduct denotes kidney
T12 813-819 GeneOrGeneProduct denotes period
T13 830-833 GeneOrGeneProduct denotes 2.2
T14 834-838 GeneOrGeneProduct denotes fold
T15 839-843 GeneOrGeneProduct denotes at 2
T16 897-901 GeneOrGeneProduct denotes fold
T17 920-927 GeneOrGeneProduct denotes remnant
T18 928-934 GeneOrGeneProduct denotes kidney
T19 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T20 1037-1046 GeneOrGeneProduct denotes behaviors
T21 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T22 1292-1296 GeneOrGeneProduct denotes dUTP
T23 1297-1301 GeneOrGeneProduct denotes nick
T24 1302-1305 GeneOrGeneProduct denotes end
T25 1323-1328 GeneOrGeneProduct denotes cells
T26 1353-1357 GeneOrGeneProduct denotes area
T27 1365-1372 GeneOrGeneProduct denotes remnant
T28 1373-1379 GeneOrGeneProduct denotes kidney

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 60-72 GeneOrGeneProduct denotes hypertension
T2 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T3 398-403 GeneOrGeneProduct denotes novel
T4 533-539 GeneOrGeneProduct denotes kidney
T5 659-667 GeneOrGeneProduct denotes syndrome
T6 715-721 GeneOrGeneProduct denotes kidney
T7 813-819 GeneOrGeneProduct denotes period
T8 834-838 GeneOrGeneProduct denotes fold
T9 897-901 GeneOrGeneProduct denotes fold
T10 928-934 GeneOrGeneProduct denotes kidney
T11 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T12 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T13 1353-1357 GeneOrGeneProduct denotes area
T14 1373-1379 GeneOrGeneProduct denotes kidney

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia D000860
T2 17-24 DiseaseOrPhenotypicFeature denotes disease D004194
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria D011507
T4 60-72 DiseaseOrPhenotypicFeature denotes hypertension D006973
T5 247-254 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T6 290-297 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T7 404-411 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T8 509-516 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T9 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney D007674
T10 600-607 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T11 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome D009404
T12 692-699 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T13 747-754 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T14 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T15 1153-1159 DiseaseOrPhenotypicFeature denotes injury D014947
T16 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic DISEASE
T17 1466-1473 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T18 1501-1509 DiseaseOrPhenotypicFeature denotes diseases D004194

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T2 813-819 GeneOrGeneProduct denotes period
T3 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T4 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 11-24 DiseaseOrPhenotypicFeature denotes renal disease 0005240
T2 30-41 DiseaseOrPhenotypicFeature denotes proteinuria 0003634
T3 60-72 DiseaseOrPhenotypicFeature denotes hypertension 0005044
T4 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome 0005377
T5 1153-1159 DiseaseOrPhenotypicFeature denotes injury 0021178
T6 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases 0019722

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia D000860
T2 17-24 DiseaseOrPhenotypicFeature denotes disease D004194
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria D011507
T4 60-72 DiseaseOrPhenotypicFeature denotes hypertension D006973
T5 247-254 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T6 290-297 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T7 404-411 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T8 509-516 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T9 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney D007674
T10 600-607 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T11 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome D009404
T12 692-699 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T13 747-754 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T14 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T15 1153-1159 DiseaseOrPhenotypicFeature denotes injury D014947
T16 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic DISEASE
T17 1466-1473 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T18 1501-1509 DiseaseOrPhenotypicFeature denotes diseases D004194

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia D000860
T2 30-41 DiseaseOrPhenotypicFeature denotes proteinuria D011507
T3 60-72 DiseaseOrPhenotypicFeature denotes hypertension D006973
T4 247-254 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T5 290-297 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T6 404-411 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T7 509-516 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T8 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney D007674
T9 600-607 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome D009404
T11 692-699 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T12 747-754 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T13 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T14 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic DISEASE
T15 1466-1473 DiseaseOrPhenotypicFeature denotes hypoxia D000860

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 615-640 ChemicalEntity denotes puromycin aminonucleoside http://purl.obolibrary.org/obo/CHEBI_42839
T2 857-882 ChemicalEntity denotes puromycin aminonucleoside http://purl.obolibrary.org/obo/CHEBI_42839
T3 1292-1296 ChemicalEntity denotes dUTP http://purl.obolibrary.org/obo/CHEBI_61555|http://purl.obolibrary.org/obo/CHEBI_17625

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 431-434 OrganismTaxon denotes rat

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T3 1292-1296 ChemicalEntity denotes dUTP http://purl.obolibrary.org/obo/CHEBI_17625|http://purl.obolibrary.org/obo/CHEBI_61555
T2 857-882 ChemicalEntity denotes puromycin aminonucleoside http://purl.obolibrary.org/obo/CHEBI_42839
T1 615-640 ChemicalEntity denotes puromycin aminonucleoside http://purl.obolibrary.org/obo/CHEBI_42839
T4 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T23381 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T39388 813-819 GeneOrGeneProduct denotes period
T27767 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T15 1466-1473 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T14 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic DISEASE
T13 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T12 747-754 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T11 692-699 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome D009404
T9 600-607 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T8 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney D007674
T7 509-516 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T6 404-411 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T5 290-297 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T93494 247-254 DiseaseOrPhenotypicFeature denotes hypoxia D000860
T40833 60-72 DiseaseOrPhenotypicFeature denotes hypertension D006973
T91161 30-41 DiseaseOrPhenotypicFeature denotes proteinuria D011507
T42982 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia D000860
T31949 431-434 OrganismTaxon denotes rat

bc5cdr-valid-experiment

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 60-72 Disease denotes hypertension
T5 247-254 Disease denotes hypoxia
T6 290-297 Disease denotes hypoxia
T7 404-411 Disease denotes hypoxia
T8 509-516 Disease denotes hypoxia
T9 524-539 Disease denotes diseased kidney
T10 600-607 Disease denotes hypoxia
T11 615-640 Chemical denotes puromycin aminonucleoside
T12 649-667 Disease denotes nephrotic syndrome
T13 692-699 Disease denotes hypoxia
T14 747-754 Disease denotes hypoxia
T15 857-882 Chemical denotes puromycin aminonucleoside
T16 1079-1086 Disease denotes hypoxia
T17 1134-1159 Disease denotes tubulointerstitial injury
T18 1336-1343 Disease denotes hypoxic
T19 1466-1473 Disease denotes hypoxia
T20 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid-deepseek-nr-ng

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 615-667 Disease denotes puromycin aminonucleoside-induced nephrotic syndrome
T6 707-721 Disease denotes remnant kidney
T7 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid-gemini-r-g

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 247-254 Disease denotes hypoxia
T6 290-297 Disease denotes hypoxia
T7 490-516 Disease denotes tubulointerstitial hypoxia
T8 583-607 Disease denotes diffuse cortical hypoxia
T9 615-640 Chemical denotes puromycin aminonucleoside
T10 649-667 Disease denotes nephrotic syndrome
T11 672-699 Disease denotes focal and segmental hypoxia
T12 747-754 Disease denotes hypoxia
T13 1134-1159 Disease denotes tubulointerstitial injury
T14 1292-1296 Chemical denotes dUTP
T15 1336-1343 Disease denotes hypoxic
T16 1447-1473 Disease denotes tubulointerstitial hypoxia
T17 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid-gemini-nr-g

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 247-254 Disease denotes hypoxia
T6 490-516 Disease denotes tubulointerstitial hypoxia
T7 524-539 Disease denotes diseased kidney
T8 591-607 Disease denotes cortical hypoxia
T9 615-640 Chemical denotes puromycin aminonucleoside
T10 649-667 Disease denotes nephrotic syndrome
T11 672-699 Disease denotes focal and segmental hypoxia
T12 747-754 Disease denotes hypoxia
T13 1122-1159 Disease denotes microscopic tubulointerstitial injury
T14 1336-1343 Disease denotes hypoxic
T15 1439-1473 Disease denotes chronic tubulointerstitial hypoxia
T16 1478-1509 Disease denotes progressive glomerular diseases

bc5cdr-valid-gemini-nr-ng

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 247-254 Disease denotes hypoxia
T6 290-297 Disease denotes hypoxia
T7 490-516 Disease denotes tubulointerstitial hypoxia
T8 583-607 Disease denotes diffuse cortical hypoxia
T9 615-640 Chemical denotes puromycin aminonucleoside
T10 649-667 Disease denotes nephrotic syndrome
T11 672-699 Disease denotes focal and segmental hypoxia
T12 747-754 Disease denotes hypoxia
T13 1122-1159 Disease denotes microscopic tubulointerstitial injury
T14 1336-1357 Disease denotes hypoxic cortical area
T15 1439-1473 Disease denotes chronic tubulointerstitial hypoxia
T16 1478-1509 Disease denotes progressive glomerular diseases

bc5cdr-valid-gemini-r-ng

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 327-361 Chemical denotes vascular endothelial growth factor
T6 490-516 Disease denotes tubulointerstitial hypoxia
T7 591-607 Disease denotes cortical hypoxia
T8 615-640 Chemical denotes puromycin aminonucleoside
T9 649-667 Disease denotes nephrotic syndrome
T10 747-754 Disease denotes hypoxia
T11 958-992 Chemical denotes vascular endothelial growth factor
T12 1134-1159 Disease denotes tubulointerstitial injury
T13 1219-1253 Chemical denotes proliferating cell nuclear antigen
T14 1292-1296 Chemical denotes dUTP
T15 1447-1473 Disease denotes tubulointerstitial hypoxia
T16 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 60-72 Disease denotes hypertension
T5 247-254 Disease denotes hypoxia
T6 290-297 Disease denotes hypoxia
T7 404-411 Disease denotes hypoxia
T8 509-516 Disease denotes hypoxia
T9 524-539 Disease denotes diseased kidney
T10 600-607 Disease denotes hypoxia
T11 615-640 Chemical denotes puromycin aminonucleoside
T12 649-667 Disease denotes nephrotic syndrome
T13 692-699 Disease denotes hypoxia
T14 747-754 Disease denotes hypoxia
T15 857-882 Chemical denotes puromycin aminonucleoside
T16 1079-1086 Disease denotes hypoxia
T17 1134-1159 Disease denotes tubulointerstitial injury
T18 1336-1343 Disease denotes hypoxic
T19 1466-1473 Disease denotes hypoxia
T20 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid-gpt-r-ng

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 327-361 Chemical denotes vascular endothelial growth factor
T6 490-516 Disease denotes tubulointerstitial hypoxia
T7 591-607 Disease denotes cortical hypoxia
T8 615-640 Chemical denotes puromycin aminonucleoside
T9 649-667 Disease denotes nephrotic syndrome
T10 672-699 Disease denotes focal and segmental hypoxia
T11 857-882 Chemical denotes puromycin aminonucleoside
T12 958-992 Chemical denotes vascular endothelial growth factor
T13 1079-1086 Disease denotes hypoxia
T14 1134-1159 Disease denotes tubulointerstitial injury
T15 1219-1253 Chemical denotes proliferating cell nuclear antigen
T16 1292-1296 Chemical denotes dUTP
T17 1439-1473 Disease denotes chronic tubulointerstitial hypoxia
T18 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid-gpt-nr-ng

Id Subject Object Predicate Lexical cue
T1 11-24 Disease denotes renal disease
T2 30-41 Disease denotes proteinuria
T3 49-72 Disease denotes glomerular hypertension
T4 615-640 Chemical denotes puromycin aminonucleoside
T5 649-667 Disease denotes nephrotic syndrome
T6 857-882 Chemical denotes puromycin aminonucleoside
T7 1134-1159 Disease denotes tubulointerstitial injury
T8 1292-1296 Chemical denotes dUTP
T9 1439-1473 Disease denotes chronic tubulointerstitial hypoxia
T10 1478-1509 Disease denotes progressive glomerular diseases

bc5cdr-valid-deepseek-r-ng

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 327-361 Chemical denotes vascular endothelial growth factor
T6 615-640 Chemical denotes puromycin aminonucleoside
T7 1219-1253 Chemical denotes proliferating cell nuclear antigen
T8 1264-1268 Chemical denotes ED-1
T9 1292-1296 Chemical denotes dUTP

bc5cdr-valid-gpt-r-g

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 247-254 Disease denotes hypoxia
T6 404-411 Disease denotes hypoxia
T7 509-516 Disease denotes hypoxia
T8 600-607 Disease denotes hypoxia
T9 615-640 Chemical denotes puromycin aminonucleoside
T10 649-667 Disease denotes nephrotic syndrome
T11 692-699 Disease denotes hypoxia
T12 747-754 Disease denotes hypoxia
T13 857-882 Chemical denotes puromycin aminonucleoside
T14 1079-1086 Disease denotes hypoxia
T15 1134-1159 Disease denotes tubulointerstitial injury
T16 1292-1296 Chemical denotes dUTP
T17 1336-1343 Disease denotes hypoxic
T18 1466-1473 Disease denotes hypoxia
T19 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid-gpt-nr-g

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 30-41 Disease denotes proteinuria
T3 49-72 Disease denotes glomerular hypertension

bc5cdr-valid-gemini-r-m

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 490-516 Disease denotes tubulointerstitial hypoxia
T6 591-607 Disease denotes cortical hypoxia
T7 615-640 Chemical denotes puromycin aminonucleoside
T8 649-667 Disease denotes nephrotic syndrome
T9 857-882 Chemical denotes puromycin aminonucleoside
T10 1079-1086 Disease denotes hypoxia
T11 1134-1159 Disease denotes tubulointerstitial injury
T12 1292-1296 Chemical denotes dUTP
T13 1336-1343 Disease denotes hypoxic
T14 1447-1473 Disease denotes tubulointerstitial hypoxia
T15 1490-1509 Disease denotes glomerular diseases

bc5cdr-valid-gpt-r-m2

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 490-516 Disease denotes tubulointerstitial hypoxia
T6 591-607 Disease denotes cortical hypoxia
T7 615-640 Chemical denotes puromycin aminonucleoside
T8 649-667 Disease denotes nephrotic syndrome
T9 682-699 Disease denotes segmental hypoxia
T10 857-882 Chemical denotes puromycin aminonucleoside
T11 1079-1086 Disease denotes hypoxia
T12 1134-1159 Disease denotes tubulointerstitial injury
T13 1292-1296 Chemical denotes dUTP
T14 1336-1343 Disease denotes hypoxic
T15 1447-1473 Disease denotes tubulointerstitial hypoxia
T16 1490-1509 Disease denotes glomerular diseases

biored-valid-deepseek-nr-ng

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 127-145 DiseaseOrPhenotypicFeature denotes tissue oxygenation
T6 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T7 362-381 SequenceVariant denotes untranslated region
T8 404-434 OrganismTaxon denotes hypoxia-sensing transgenic rat
T9 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T10 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney
T11 583-607 DiseaseOrPhenotypicFeature denotes diffuse cortical hypoxia
T12 615-667 DiseaseOrPhenotypicFeature denotes puromycin aminonucleoside-induced nephrotic syndrome
T13 672-699 DiseaseOrPhenotypicFeature denotes focal and segmental hypoxia
T14 707-727 DiseaseOrPhenotypicFeature denotes remnant kidney model
T15 747-775 GeneOrGeneProduct denotes hypoxia-responsive transgene
T16 920-940 DiseaseOrPhenotypicFeature denotes remnant kidney model
T17 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T18 1054-1063 GeneOrGeneProduct denotes two genes
T19 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T20 1219-1262 GeneOrGeneProduct denotes proliferating cell nuclear antigen-positive
T21 1264-1277 GeneOrGeneProduct denotes ED-1-positive
T22 1283-1322 GeneOrGeneProduct denotes terminal dUTP nick-end labeled-positive
T23 1336-1357 DiseaseOrPhenotypicFeature denotes hypoxic cortical area
T24 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T25 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

biored-valid

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 60-72 DiseaseOrPhenotypicFeature denotes hypertension
T5 247-254 DiseaseOrPhenotypicFeature denotes hypoxia
T6 290-297 DiseaseOrPhenotypicFeature denotes hypoxia
T7 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T8 404-411 DiseaseOrPhenotypicFeature denotes hypoxia
T9 431-434 OrganismTaxon denotes rat
T10 509-516 DiseaseOrPhenotypicFeature denotes hypoxia
T11 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney
T12 600-607 DiseaseOrPhenotypicFeature denotes hypoxia
T13 615-640 ChemicalEntity denotes puromycin aminonucleoside
T14 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T15 692-699 DiseaseOrPhenotypicFeature denotes hypoxia
T16 747-754 DiseaseOrPhenotypicFeature denotes hypoxia
T17 857-882 ChemicalEntity denotes puromycin aminonucleoside
T18 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T19 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T20 1134-1159 DiseaseOrPhenotypicFeature denotes tubulointerstitial injury
T21 1264-1268 GeneOrGeneProduct denotes ED-1
T22 1292-1296 ChemicalEntity denotes dUTP
T23 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T24 1466-1473 DiseaseOrPhenotypicFeature denotes hypoxia
T25 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases

biored-valid-deepseek-nr-g

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 247-254 DiseaseOrPhenotypicFeature denotes hypoxia
T6 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T7 404-411 DiseaseOrPhenotypicFeature denotes hypoxia
T8 509-516 DiseaseOrPhenotypicFeature denotes hypoxia
T9 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney
T10 600-607 DiseaseOrPhenotypicFeature denotes hypoxia
T11 615-667 DiseaseOrPhenotypicFeature denotes puromycin aminonucleoside-induced nephrotic syndrome
T12 692-699 DiseaseOrPhenotypicFeature denotes hypoxia
T13 707-721 DiseaseOrPhenotypicFeature denotes remnant kidney
T14 747-754 DiseaseOrPhenotypicFeature denotes hypoxia
T15 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T16 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T17 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

biored-valid-deepseek-r-ng

Id Subject Object Predicate Lexical cue
T1 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T2 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T3 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T4 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T5 390-393 OrganismTaxon denotes rat
T6 615-640 ChemicalEntity denotes puromycin aminonucleoside
T7 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T8 747-775 GeneOrGeneProduct denotes hypoxia-responsive transgene
T9 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T10 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T11 1264-1268 GeneOrGeneProduct denotes ED-1
T12 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

bc5cdr-valid-deepseek-r-g

Id Subject Object Predicate Lexical cue
T1 11-24 Disease denotes renal disease
T2 30-41 Disease denotes proteinuria
T3 49-72 Disease denotes glomerular hypertension
T4 490-516 Disease denotes tubulointerstitial hypoxia
T5 615-640 Chemical denotes puromycin aminonucleoside
T6 649-667 Disease denotes nephrotic syndrome
T7 1292-1296 Chemical denotes dUTP
T8 1439-1473 Disease denotes chronic tubulointerstitial hypoxia
T9 1478-1509 Disease denotes progressive glomerular diseases

biored-valid-deepseek-r-g

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 583-607 DiseaseOrPhenotypicFeature denotes diffuse cortical hypoxia
T9 615-640 ChemicalEntity denotes puromycin aminonucleoside
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T11 672-699 DiseaseOrPhenotypicFeature denotes focal and segmental hypoxia
T12 747-775 GeneOrGeneProduct denotes hypoxia-responsive transgene
T13 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T14 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T15 1264-1268 GeneOrGeneProduct denotes ED-1
T16 1292-1296 ChemicalEntity denotes dUTP
T17 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T18 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T19 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

biored-valid-gemini-nr-ng

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 524-539 DiseaseOrPhenotypicFeature denotes diseased kidney
T9 583-607 DiseaseOrPhenotypicFeature denotes diffuse cortical hypoxia
T10 615-667 DiseaseOrPhenotypicFeature denotes puromycin aminonucleoside-induced nephrotic syndrome
T11 672-699 DiseaseOrPhenotypicFeature denotes focal and segmental hypoxia
T12 707-727 DiseaseOrPhenotypicFeature denotes remnant kidney model
T13 747-775 GeneOrGeneProduct denotes hypoxia-responsive transgene
T14 857-882 ChemicalEntity denotes puromycin aminonucleoside
T15 920-940 DiseaseOrPhenotypicFeature denotes remnant kidney model
T16 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T17 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T18 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T19 1219-1262 GeneOrGeneProduct denotes proliferating cell nuclear antigen-positive
T20 1264-1277 GeneOrGeneProduct denotes ED-1-positive
T21 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T22 1365-1385 DiseaseOrPhenotypicFeature denotes remnant kidney model
T23 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T24 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

biored-valid-gemini-r-g

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 247-254 DiseaseOrPhenotypicFeature denotes hypoxia
T6 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T7 390-393 OrganismTaxon denotes rat
T8 404-411 DiseaseOrPhenotypicFeature denotes hypoxia
T9 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T10 591-607 DiseaseOrPhenotypicFeature denotes cortical hypoxia
T11 615-640 ChemicalEntity denotes puromycin aminonucleoside
T12 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T13 747-754 DiseaseOrPhenotypicFeature denotes hypoxia
T14 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T15 1134-1159 DiseaseOrPhenotypicFeature denotes tubulointerstitial injury
T16 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T17 1264-1268 GeneOrGeneProduct denotes ED-1
T18 1292-1296 ChemicalEntity denotes dUTP
T19 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T20 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T21 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases

biored-valid-gemini-r-ng

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 127-145 DiseaseOrPhenotypicFeature denotes tissue oxygenation
T6 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T7 390-393 OrganismTaxon denotes rat
T8 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T9 583-607 DiseaseOrPhenotypicFeature denotes diffuse cortical hypoxia
T10 615-640 ChemicalEntity denotes puromycin aminonucleoside
T11 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T12 672-699 DiseaseOrPhenotypicFeature denotes focal and segmental hypoxia
T13 707-727 DiseaseOrPhenotypicFeature denotes remnant kidney model
T14 747-775 GeneOrGeneProduct denotes hypoxia-responsive transgene
T15 857-882 ChemicalEntity denotes puromycin aminonucleoside
T16 920-940 DiseaseOrPhenotypicFeature denotes remnant kidney model
T17 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T18 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T19 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T20 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T21 1264-1268 GeneOrGeneProduct denotes ED-1
T22 1292-1296 ChemicalEntity denotes dUTP
T23 1365-1385 DiseaseOrPhenotypicFeature denotes remnant kidney model
T24 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T25 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

biored-valid-gpt-nr-ng

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 591-607 DiseaseOrPhenotypicFeature denotes cortical hypoxia
T9 615-640 ChemicalEntity denotes puromycin aminonucleoside
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T11 682-699 DiseaseOrPhenotypicFeature denotes segmental hypoxia
T12 857-882 ChemicalEntity denotes puromycin aminonucleoside
T13 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T14 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T15 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T16 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T17 1264-1268 GeneOrGeneProduct denotes ED-1
T18 1292-1296 ChemicalEntity denotes dUTP
T19 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T20 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

biored-valid-gpt-r-ng

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 591-607 DiseaseOrPhenotypicFeature denotes cortical hypoxia
T9 615-640 ChemicalEntity denotes puromycin aminonucleoside
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T11 682-699 DiseaseOrPhenotypicFeature denotes segmental hypoxia
T12 857-882 ChemicalEntity denotes puromycin aminonucleoside
T13 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T14 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T15 1134-1159 DiseaseOrPhenotypicFeature denotes tubulointerstitial injury
T16 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T17 1264-1268 GeneOrGeneProduct denotes ED-1
T18 1292-1296 ChemicalEntity denotes dUTP
T19 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T20 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T21 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases

biored-valid-gpt-nr-g

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 600-607 DiseaseOrPhenotypicFeature denotes hypoxia
T9 615-640 ChemicalEntity denotes puromycin aminonucleoside
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T11 692-699 DiseaseOrPhenotypicFeature denotes hypoxia
T12 857-882 ChemicalEntity denotes puromycin aminonucleoside
T13 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T14 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T15 1134-1159 DiseaseOrPhenotypicFeature denotes tubulointerstitial injury
T16 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T17 1292-1296 ChemicalEntity denotes dUTP
T18 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T19 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T20 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases

biored-valid-gpt-r-g

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 60-72 DiseaseOrPhenotypicFeature denotes hypertension
T5 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 591-607 DiseaseOrPhenotypicFeature denotes cortical hypoxia
T9 615-640 ChemicalEntity denotes puromycin aminonucleoside
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T11 682-699 DiseaseOrPhenotypicFeature denotes segmental hypoxia
T12 857-882 ChemicalEntity denotes puromycin aminonucleoside
T13 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T14 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T15 1134-1159 DiseaseOrPhenotypicFeature denotes tubulointerstitial injury
T16 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T17 1292-1296 ChemicalEntity denotes dUTP
T18 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T19 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia

biored-valid-gemini-nr-g

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 327-354 GeneOrGeneProduct denotes vascular endothelial growth
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 591-607 DiseaseOrPhenotypicFeature denotes cortical hypoxia
T9 615-640 ChemicalEntity denotes puromycin aminonucleoside
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T11 672-699 DiseaseOrPhenotypicFeature denotes focal and segmental hypoxia
T12 747-754 DiseaseOrPhenotypicFeature denotes hypoxia
T13 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T14 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T15 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T16 1264-1268 GeneOrGeneProduct denotes ED-1
T17 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T18 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T19 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases

bc5cdr-valid-deepseek-nr-g

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 247-254 Disease denotes hypoxia
T6 290-297 Disease denotes hypoxia
T7 404-411 Disease denotes hypoxia
T8 509-516 Disease denotes hypoxia
T9 600-607 Disease denotes hypoxia
T10 692-699 Disease denotes hypoxia
T11 747-754 Disease denotes hypoxia
T12 1079-1086 Disease denotes hypoxia
T13 1466-1473 Disease denotes hypoxia

biored-valid-gpt-r-m

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 60-72 DiseaseOrPhenotypicFeature denotes hypertension
T5 247-254 DiseaseOrPhenotypicFeature denotes hypoxia
T6 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T7 390-393 OrganismTaxon denotes rat
T8 404-411 DiseaseOrPhenotypicFeature denotes hypoxia
T9 509-516 DiseaseOrPhenotypicFeature denotes hypoxia
T10 600-607 DiseaseOrPhenotypicFeature denotes hypoxia
T11 615-640 ChemicalEntity denotes puromycin aminonucleoside
T12 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T13 692-699 DiseaseOrPhenotypicFeature denotes hypoxia
T14 747-754 DiseaseOrPhenotypicFeature denotes hypoxia
T15 857-882 ChemicalEntity denotes puromycin aminonucleoside
T16 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T17 1079-1086 DiseaseOrPhenotypicFeature denotes hypoxia
T18 1153-1159 DiseaseOrPhenotypicFeature denotes injury
T19 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T20 1264-1268 GeneOrGeneProduct denotes ED-1
T21 1292-1296 ChemicalEntity denotes dUTP
T22 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T23 1466-1473 DiseaseOrPhenotypicFeature denotes hypoxia
T24 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases

biored-valid-gemini-r-m

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 247-254 DiseaseOrPhenotypicFeature denotes hypoxia
T6 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T7 390-393 OrganismTaxon denotes rat
T8 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T9 600-607 DiseaseOrPhenotypicFeature denotes hypoxia
T10 615-640 ChemicalEntity denotes puromycin aminonucleoside
T11 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T12 692-699 DiseaseOrPhenotypicFeature denotes hypoxia
T13 707-721 DiseaseOrPhenotypicFeature denotes remnant kidney
T14 747-754 DiseaseOrPhenotypicFeature denotes hypoxia
T15 920-934 DiseaseOrPhenotypicFeature denotes remnant kidney
T16 958-992 GeneOrGeneProduct denotes vascular endothelial growth factor
T17 1134-1159 DiseaseOrPhenotypicFeature denotes tubulointerstitial injury
T18 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T19 1264-1268 GeneOrGeneProduct denotes ED-1
T20 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T21 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T22 1490-1509 DiseaseOrPhenotypicFeature denotes glomerular diseases

bc5cdr-valid-deepseek-r-m

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 11-24 Disease denotes renal disease
T3 30-41 Disease denotes proteinuria
T4 49-72 Disease denotes glomerular hypertension
T5 404-411 Disease denotes hypoxia
T6 490-516 Disease denotes tubulointerstitial hypoxia
T7 524-532 Disease denotes diseased
T8 591-607 Disease denotes cortical hypoxia
T9 615-640 Chemical denotes puromycin aminonucleoside
T10 649-667 Disease denotes nephrotic syndrome
T11 1122-1159 Disease denotes microscopic tubulointerstitial injury
T12 1292-1296 Chemical denotes dUTP
T13 1336-1343 Disease denotes hypoxic
T14 1439-1473 Disease denotes chronic tubulointerstitial hypoxia
T15 1478-1509 Disease denotes progressive glomerular diseases

bc5cdr-valid-gpt-r-m

Id Subject Object Predicate Lexical cue
T1 0-7 Disease denotes Hypoxia
T2 30-41 Disease denotes proteinuria
T3 49-72 Disease denotes glomerular hypertension
T4 490-516 Disease denotes tubulointerstitial hypoxia
T5 591-607 Disease denotes cortical hypoxia
T6 615-640 Chemical denotes puromycin aminonucleoside
T7 649-667 Disease denotes nephrotic syndrome
T8 672-699 Disease denotes focal and segmental hypoxia
T9 857-882 Chemical denotes puromycin aminonucleoside
T10 1079-1086 Disease denotes hypoxia
T11 1134-1159 Disease denotes tubulointerstitial injury
T12 1292-1296 Chemical denotes dUTP
T13 1336-1343 Disease denotes hypoxic
T14 1447-1473 Disease denotes tubulointerstitial hypoxia

biored-valid-deepseek-r-m

Id Subject Object Predicate Lexical cue
T1 0-7 DiseaseOrPhenotypicFeature denotes Hypoxia
T2 11-24 DiseaseOrPhenotypicFeature denotes renal disease
T3 30-41 DiseaseOrPhenotypicFeature denotes proteinuria
T4 49-72 DiseaseOrPhenotypicFeature denotes glomerular hypertension
T5 327-361 GeneOrGeneProduct denotes vascular endothelial growth factor
T6 390-393 OrganismTaxon denotes rat
T7 490-516 DiseaseOrPhenotypicFeature denotes tubulointerstitial hypoxia
T8 583-607 DiseaseOrPhenotypicFeature denotes diffuse cortical hypoxia
T9 615-640 ChemicalEntity denotes puromycin aminonucleoside
T10 649-667 DiseaseOrPhenotypicFeature denotes nephrotic syndrome
T11 672-699 DiseaseOrPhenotypicFeature denotes focal and segmental hypoxia
T12 747-775 GeneOrGeneProduct denotes hypoxia-responsive transgene
T13 1122-1159 DiseaseOrPhenotypicFeature denotes microscopic tubulointerstitial injury
T14 1219-1253 GeneOrGeneProduct denotes proliferating cell nuclear antigen
T15 1264-1268 GeneOrGeneProduct denotes ED-1
T16 1336-1343 DiseaseOrPhenotypicFeature denotes hypoxic
T17 1439-1473 DiseaseOrPhenotypicFeature denotes chronic tubulointerstitial hypoxia
T18 1478-1509 DiseaseOrPhenotypicFeature denotes progressive glomerular diseases