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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 431-440 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T2 431-440 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T3 1053-1062 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T4 1053-1062 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 431-440 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T3 1053-1062 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 431-440 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T2 431-440 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T3 1053-1062 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T4 1053-1062 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 307-318 http://purl.obolibrary.org/obo/MAT_0000373 denotes vertebrates
T2 391-398 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T3 1078-1086 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo's
T4 1409-1416 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T5 1740-1747 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-114 Sentence denotes Isolation, characterization, and extra-embryonic secretion of the Xenopus laevis embryonic epidermal lectin, XEEL.
TextSentencer_T2 115-333 Sentence denotes The Xenopus laevis embryonic epidermal lectin (XEEL) is a novel member of a group of lectins including mammalian intelectins, frog oocyte cortical granule lectins, and plasma lectins in lower vertebrates and ascidians.
TextSentencer_T3 334-458 Sentence denotes We isolated the XEEL protein from the extract of tailbud embryos by affinity chromatography on a galactose-Sepharose column.
TextSentencer_T4 459-561 Sentence denotes The XEEL protein is a homohexamer of 43-kDa N-glycosylated peptide subunits linked by disulfide bonds.
TextSentencer_T5 562-675 Sentence denotes It requires Ca(2+) for saccharide binding and shows a higher affinity to pentoses than hexoses and disaccharides.
TextSentencer_T6 676-910 Sentence denotes HEK-293T cells transfected with an expression vector containing the XEEL cDNA secrete into the culture medium the recombinant XEEL (rXEEL) that is similar to the purified XEEL in its molecular nature and saccharide-binding properties.
TextSentencer_T7 911-1073 Sentence denotes Substitution of Asn-192 to Gln removed the N-linked carbohydrate and inhibited secretion of rXEEL but did not abolish the activity to bind to galactose-Sepharose.
TextSentencer_T8 1074-1224 Sentence denotes The embryo's XEEL content, as estimated by western blot analyses, increases during neurula/tailbud stages and declines after 1 week postfertilization.
TextSentencer_T9 1225-1395 Sentence denotes Immunofluorescence and immuno-electron microscopic analyses showed localization of the XEEL protein in a typical secretory granule pathway of nonciliated epidermal cells.
TextSentencer_T10 1396-1549 Sentence denotes When tailbud embryos were cultured in the standard medium, XEEL was accumulated in the medium, indicating secretion of XEEL into the environmental water.
TextSentencer_T11 1550-1688 Sentence denotes The rate of XEEL secretion greatly increased at around the hatching stage and stayed at a high level during the first week after hatching.
TextSentencer_T12 1689-1820 Sentence denotes XEEL may have a role in innate immunity to protect embryos and larvae against pathogenic microorganisms in the environmental water.
T1 0-114 Sentence denotes Isolation, characterization, and extra-embryonic secretion of the Xenopus laevis embryonic epidermal lectin, XEEL.
T2 115-333 Sentence denotes The Xenopus laevis embryonic epidermal lectin (XEEL) is a novel member of a group of lectins including mammalian intelectins, frog oocyte cortical granule lectins, and plasma lectins in lower vertebrates and ascidians.
T3 334-458 Sentence denotes We isolated the XEEL protein from the extract of tailbud embryos by affinity chromatography on a galactose-Sepharose column.
T4 459-561 Sentence denotes The XEEL protein is a homohexamer of 43-kDa N-glycosylated peptide subunits linked by disulfide bonds.
T5 562-675 Sentence denotes It requires Ca(2+) for saccharide binding and shows a higher affinity to pentoses than hexoses and disaccharides.
T6 676-910 Sentence denotes HEK-293T cells transfected with an expression vector containing the XEEL cDNA secrete into the culture medium the recombinant XEEL (rXEEL) that is similar to the purified XEEL in its molecular nature and saccharide-binding properties.
T7 911-1224 Sentence denotes Substitution of Asn-192 to Gln removed the N-linked carbohydrate and inhibited secretion of rXEEL but did not abolish the activity to bind to galactose-Sepharose. The embryo's XEEL content, as estimated by western blot analyses, increases during neurula/tailbud stages and declines after 1 week postfertilization.
T8 1225-1395 Sentence denotes Immunofluorescence and immuno-electron microscopic analyses showed localization of the XEEL protein in a typical secretory granule pathway of nonciliated epidermal cells.
T9 1396-1549 Sentence denotes When tailbud embryos were cultured in the standard medium, XEEL was accumulated in the medium, indicating secretion of XEEL into the environmental water.
T10 1550-1688 Sentence denotes The rate of XEEL secretion greatly increased at around the hatching stage and stayed at a high level during the first week after hatching.
T11 1689-1820 Sentence denotes XEEL may have a role in innate immunity to protect embryos and larvae against pathogenic microorganisms in the environmental water.
T1 0-114 Sentence denotes Isolation, characterization, and extra-embryonic secretion of the Xenopus laevis embryonic epidermal lectin, XEEL.
T2 115-333 Sentence denotes The Xenopus laevis embryonic epidermal lectin (XEEL) is a novel member of a group of lectins including mammalian intelectins, frog oocyte cortical granule lectins, and plasma lectins in lower vertebrates and ascidians.
T3 334-458 Sentence denotes We isolated the XEEL protein from the extract of tailbud embryos by affinity chromatography on a galactose-Sepharose column.
T4 459-561 Sentence denotes The XEEL protein is a homohexamer of 43-kDa N-glycosylated peptide subunits linked by disulfide bonds.
T5 562-675 Sentence denotes It requires Ca(2+) for saccharide binding and shows a higher affinity to pentoses than hexoses and disaccharides.
T6 676-910 Sentence denotes HEK-293T cells transfected with an expression vector containing the XEEL cDNA secrete into the culture medium the recombinant XEEL (rXEEL) that is similar to the purified XEEL in its molecular nature and saccharide-binding properties.
T7 911-1073 Sentence denotes Substitution of Asn-192 to Gln removed the N-linked carbohydrate and inhibited secretion of rXEEL but did not abolish the activity to bind to galactose-Sepharose.
T8 1074-1224 Sentence denotes The embryo's XEEL content, as estimated by western blot analyses, increases during neurula/tailbud stages and declines after 1 week postfertilization.
T9 1225-1395 Sentence denotes Immunofluorescence and immuno-electron microscopic analyses showed localization of the XEEL protein in a typical secretory granule pathway of nonciliated epidermal cells.
T10 1396-1549 Sentence denotes When tailbud embryos were cultured in the standard medium, XEEL was accumulated in the medium, indicating secretion of XEEL into the environmental water.
T11 1550-1688 Sentence denotes The rate of XEEL secretion greatly increased at around the hatching stage and stayed at a high level during the first week after hatching.
T12 1689-1820 Sentence denotes XEEL may have a role in innate immunity to protect embryos and larvae against pathogenic microorganisms in the environmental water.

uniprot-human

Id Subject Object Predicate Lexical cue
T1 676-679 http://www.uniprot.org/uniprot/P29320 denotes HEK

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 927-930 http://www.uniprot.org/uniprot/Q61024 denotes Asn
T2 938-941 http://www.uniprot.org/uniprot/P15105 denotes Gln

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 66-80 http://purl.bioontology.org/ontology/NCBITAXON/8355 denotes Xenopus laevis
T2 66-80 http://purl.bioontology.org/ontology/NCBITAXON/8359 denotes Xenopus laevis
T3 119-133 http://purl.bioontology.org/ontology/NCBITAXON/8355 denotes Xenopus laevis
T4 119-133 http://purl.bioontology.org/ontology/NCBITAXON/8359 denotes Xenopus laevis
T5 191-196 http://purl.bioontology.org/ontology/STY/T096 denotes group
T6 307-318 http://purl.bioontology.org/ontology/STY/T010 denotes vertebrates
T7 685-690 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T8 1255-1263 http://purl.bioontology.org/ontology/NCBITAXON/68518 denotes electron
T9 1389-1394 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T1 49-58 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T2 990-999 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T3 1502-1511 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion
T4 754-761 http://purl.obolibrary.org/obo/GO_0046903 denotes secrete
T5 505-517 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylated
T6 574-576 http://purl.obolibrary.org/obo/GO_0033968 denotes Ca
T7 980-999 http://purl.obolibrary.org/obo/GO_0051048 denotes inhibited secretion
T8 1033-1049 http://purl.obolibrary.org/obo/GO_0051099 denotes activity to bind
T9 1292-1304 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T10 1609-1617 http://purl.obolibrary.org/obo/GO_0035188 denotes hatching
T11 1679-1687 http://purl.obolibrary.org/obo/GO_0035188 denotes hatching
T12 1713-1728 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immunity

GO-MF

Id Subject Object Predicate Lexical cue
T1 596-603 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T2 891-898 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 1045-1049 http://purl.obolibrary.org/obo/GO_0070026 denotes bind
T4 596-603 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T5 891-898 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T6 1045-1049 http://purl.obolibrary.org/obo/GO_0003680 denotes bind
T7 596-603 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T8 891-898 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T9 1045-1049 http://purl.obolibrary.org/obo/GO_0017091 denotes bind
T10 596-603 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T11 891-898 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T12 1045-1049 http://purl.obolibrary.org/obo/GO_0005488 denotes bind
T13 1045-1062 http://purl.obolibrary.org/obo/GO_0005534 denotes bind to galactose

GO-CC

Id Subject Object Predicate Lexical cue
T1 253-269 http://purl.obolibrary.org/obo/GO_0060473 denotes cortical granule
T2 685-690 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T3 1389-1394 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T4 1338-1355 http://purl.obolibrary.org/obo/GO_0030141 denotes secretory granule

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 307-318 http://purl.obolibrary.org/obo/UBERON_3010224 denotes vertebrates
T2 391-398 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos
T3 1409-1416 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos
T4 1740-1747 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos
T5 1752-1758 http://purl.obolibrary.org/obo/UBERON_0002548 denotes larvae

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 307-318 http://purl.obolibrary.org/obo/MAT_0000373 denotes vertebrates
T2 391-398 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T3 1078-1084 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryo
T4 1409-1416 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos
T5 1740-1747 http://purl.obolibrary.org/obo/MAT_0000226 denotes embryos

Lectin

Id Subject Object Predicate Lexical cue
Lectin_T1 574-576 https://acgg.asia/db/lfdb/LfDB0227 denotes Ca

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 931-934 http://www.glycoepitope.jp/epitopes/AN0741 denotes 192

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 307-318 http://purl.obolibrary.org/obo/UBERON_3010224 denotes vertebrates
PD-UBERON-AE-B_T2 391-398 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos
PD-UBERON-AE-B_T3 1078-1086 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryo's
PD-UBERON-AE-B_T4 1409-1416 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos
PD-UBERON-AE-B_T5 1740-1747 http://purl.obolibrary.org/obo/UBERON_0000922 denotes embryos
PD-UBERON-AE-B_T6 1752-1758 http://purl.obolibrary.org/obo/UBERON_0002548 denotes larvae

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 307-318 Body_part denotes vertebrates http://purl.obolibrary.org/obo/MAT_0000373
T2 391-398 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T3 1078-1086 Body_part denotes embryo's http://purl.obolibrary.org/obo/MAT_0000226
T4 1409-1416 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226
T5 1740-1747 Body_part denotes embryos http://purl.obolibrary.org/obo/MAT_0000226

Lectin-Jamboree

Id Subject Object Predicate Lexical cue
T1 101-107 lectin denotes lectin
T2 154-160 lectin denotes lectin
T3 200-207 lectin denotes lectins
T4 270-277 lectin denotes lectins
T5 290-300 lectin denotes lectins in

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-114 Sentence denotes Isolation, characterization, and extra-embryonic secretion of the Xenopus laevis embryonic epidermal lectin, XEEL.
T2 115-333 Sentence denotes The Xenopus laevis embryonic epidermal lectin (XEEL) is a novel member of a group of lectins including mammalian intelectins, frog oocyte cortical granule lectins, and plasma lectins in lower vertebrates and ascidians.
T3 334-458 Sentence denotes We isolated the XEEL protein from the extract of tailbud embryos by affinity chromatography on a galactose-Sepharose column.
T4 459-561 Sentence denotes The XEEL protein is a homohexamer of 43-kDa N-glycosylated peptide subunits linked by disulfide bonds.
T5 562-675 Sentence denotes It requires Ca(2+) for saccharide binding and shows a higher affinity to pentoses than hexoses and disaccharides.
T6 676-910 Sentence denotes HEK-293T cells transfected with an expression vector containing the XEEL cDNA secrete into the culture medium the recombinant XEEL (rXEEL) that is similar to the purified XEEL in its molecular nature and saccharide-binding properties.
T7 911-1224 Sentence denotes Substitution of Asn-192 to Gln removed the N-linked carbohydrate and inhibited secretion of rXEEL but did not abolish the activity to bind to galactose-Sepharose. The embryo's XEEL content, as estimated by western blot analyses, increases during neurula/tailbud stages and declines after 1 week postfertilization.
T8 1225-1395 Sentence denotes Immunofluorescence and immuno-electron microscopic analyses showed localization of the XEEL protein in a typical secretory granule pathway of nonciliated epidermal cells.
T9 1396-1549 Sentence denotes When tailbud embryos were cultured in the standard medium, XEEL was accumulated in the medium, indicating secretion of XEEL into the environmental water.
T10 1550-1688 Sentence denotes The rate of XEEL secretion greatly increased at around the hatching stage and stayed at a high level during the first week after hatching.
T11 1689-1820 Sentence denotes XEEL may have a role in innate immunity to protect embryos and larvae against pathogenic microorganisms in the environmental water.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 66-80 OrganismTaxon denotes Xenopus laevis 8355
T2 119-133 OrganismTaxon denotes Xenopus laevis 8355

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 246-252 Body_part denotes oocyte http://purl.obolibrary.org/obo/CL_0000023
T2 283-289 Body_part denotes plasma http://purl.obolibrary.org/obo/UBERON_0001969
T3 383-390 Body_part denotes tailbud http://purl.obolibrary.org/obo/UBERON_0002533
T4 1157-1164 Body_part denotes neurula http://purl.obolibrary.org/obo/UBERON_0004455
T5 1165-1172 Body_part denotes tailbud http://purl.obolibrary.org/obo/UBERON_0002533
T6 1338-1355 Body_part denotes secretory granule http://purl.obolibrary.org/obo/GO_0030141
T7 1379-1394 Body_part denotes epidermal cells http://purl.obolibrary.org/obo/CL_0000362
T8 1401-1408 Body_part denotes tailbud http://purl.obolibrary.org/obo/UBERON_0002533

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 246-252 Cell denotes oocyte http://purl.obolibrary.org/obo/CL:0000023
T2 1379-1394 Cell denotes epidermal cells http://purl.obolibrary.org/obo/CL:0000362