PubMed:1535455
Annnotations
jnlpba-st-training
{"project":"jnlpba-st-training","denotations":[{"id":"T1","span":{"begin":50,"end":66},"obj":"protein"},{"id":"T2","span":{"begin":70,"end":83},"obj":"cell_type"},{"id":"T3","span":{"begin":85,"end":98},"obj":"cell_type"},{"id":"T4","span":{"begin":139,"end":174},"obj":"protein"},{"id":"T5","span":{"begin":176,"end":188},"obj":"protein"},{"id":"T6","span":{"begin":234,"end":253},"obj":"protein"},{"id":"T7","span":{"begin":321,"end":340},"obj":"protein"},{"id":"T8","span":{"begin":467,"end":500},"obj":"cell_line"},{"id":"T9","span":{"begin":653,"end":665},"obj":"protein"},{"id":"T10","span":{"begin":691,"end":703},"obj":"protein"},{"id":"T11","span":{"begin":770,"end":782},"obj":"protein"},{"id":"T12","span":{"begin":795,"end":817},"obj":"protein"},{"id":"T13","span":{"begin":906,"end":924},"obj":"protein"},{"id":"T14","span":{"begin":944,"end":987},"obj":"protein"}],"text":"Cytoplasmic domain heterogeneity and functions of IgG Fc receptors in B lymphocytes.\nB lymphocytes and macrophages express closely related immunoglobulin G (IgG) Fc receptors (Fc gamma RII) that differ only in the structures of their cytoplasmic domains. Because of cell type-specific alternative messenger RNA splicing, B-cell Fc gamma RII contains an insertion of 47 amino acids that participates in determining receptor function in these cells. Transfection of an Fc gamma RII-negative B-cell line with complementary DNA's encoding the two splice products and various receptor mutants indicated that the insertion was responsible for preventing both Fc gamma RII-mediated endocytosis and Fc gamma RII-mediated antigen presentation. The insertion was not required for Fc gamma RII to modulate surface immunoglobulin-triggered B-cell activation. Instead, regulation of activation involved a region of the cytoplasmic domain common to both the lymphocyte and macrophage receptor isoforms. In contrast, the insertion did contribute to the formation of caps in response to receptor cross-linking, consistent with suggestions that the lymphocyte but not macrophage form of the receptor can associate with the detergent-insoluble cytoskeleton."}
genia-medco-coref
{"project":"genia-medco-coref","denotations":[{"id":"C1","span":{"begin":0,"end":18},"obj":"NP"},{"id":"C2","span":{"begin":50,"end":66},"obj":"NP"},{"id":"C3","span":{"begin":70,"end":83},"obj":"NP"},{"id":"C4","span":{"begin":85,"end":98},"obj":"NP"},{"id":"C5","span":{"begin":103,"end":114},"obj":"NP"},{"id":"C6","span":{"begin":123,"end":189},"obj":"NP"},{"id":"C7","span":{"begin":190,"end":194},"obj":"NP"},{"id":"C9","span":{"begin":228,"end":233},"obj":"NP"},{"id":"C8","span":{"begin":228,"end":253},"obj":"NP"},{"id":"C10","span":{"begin":321,"end":340},"obj":"NP"},{"id":"C11","span":{"begin":350,"end":380},"obj":"NP"},{"id":"C12","span":{"begin":381,"end":385},"obj":"NP"},{"id":"C13","span":{"begin":435,"end":446},"obj":"NP"},{"id":"C14","span":{"begin":467,"end":479},"obj":"NP"},{"id":"C15","span":{"begin":603,"end":616},"obj":"NP"},{"id":"C16","span":{"begin":653,"end":665},"obj":"NP"},{"id":"C17","span":{"begin":691,"end":703},"obj":"NP"},{"id":"C18","span":{"begin":735,"end":748},"obj":"NP"},{"id":"C19","span":{"begin":770,"end":782},"obj":"NP"},{"id":"C20","span":{"begin":795,"end":845},"obj":"NP"},{"id":"C21","span":{"begin":870,"end":880},"obj":"NP"},{"id":"C23","span":{"begin":944,"end":954},"obj":"NP"},{"id":"C24","span":{"begin":959,"end":969},"obj":"NP"},{"id":"C22","span":{"begin":902,"end":987},"obj":"NP"},{"id":"C25","span":{"begin":1002,"end":1015},"obj":"NP"},{"id":"C26","span":{"begin":1111,"end":1122},"obj":"NP"},{"id":"C27","span":{"begin":1123,"end":1127},"obj":"NP"},{"id":"C28","span":{"begin":1132,"end":1142},"obj":"NP"},{"id":"C29","span":{"begin":1151,"end":1161},"obj":"NP"}],"relations":[{"id":"R1","pred":"coref-ident","subj":"C4","obj":"C3"},{"id":"R2","pred":"coref-other","subj":"C6","obj":"C2"},{"id":"R3","pred":"coref-relat","subj":"C7","obj":"C6"},{"id":"R4","pred":"coref-pron","subj":"C9","obj":"C6"},{"id":"R5","pred":"coref-other","subj":"C8","obj":"C1"},{"id":"R6","pred":"coref-ident","subj":"C10","obj":"C2"},{"id":"R7","pred":"coref-relat","subj":"C12","obj":"C11"},{"id":"R8","pred":"coref-other","subj":"C13","obj":"C4"},{"id":"R9","pred":"coref-other","subj":"C14","obj":"C10"},{"id":"R10","pred":"coref-ident","subj":"C15","obj":"C11"},{"id":"R11","pred":"coref-ident","subj":"C16","obj":"C14"},{"id":"R12","pred":"coref-ident","subj":"C17","obj":"C16"},{"id":"R13","pred":"coref-ident","subj":"C18","obj":"C15"},{"id":"R14","pred":"coref-ident","subj":"C19","obj":"C17"},{"id":"R15","pred":"coref-other","subj":"C21","obj":"C20"},{"id":"R16","pred":"coref-other","subj":"C23","obj":"C4"},{"id":"R17","pred":"coref-ident","subj":"C24","obj":"C5"},{"id":"R18","pred":"coref-other","subj":"C22","obj":"C8"},{"id":"R19","pred":"coref-ident","subj":"C25","obj":"C18"},{"id":"R20","pred":"coref-relat","subj":"C27","obj":"C26"},{"id":"R21","pred":"coref-ident","subj":"C28","obj":"C23"},{"id":"R22","pred":"coref-ident","subj":"C29","obj":"C24"}],"text":"Cytoplasmic domain heterogeneity and functions of IgG Fc receptors in B lymphocytes.\nB lymphocytes and macrophages express closely related immunoglobulin G (IgG) Fc receptors (Fc gamma RII) that differ only in the structures of their cytoplasmic domains. Because of cell type-specific alternative messenger RNA splicing, B-cell Fc gamma RII contains an insertion of 47 amino acids that participates in determining receptor function in these cells. Transfection of an Fc gamma RII-negative B-cell line with complementary DNA's encoding the two splice products and various receptor mutants indicated that the insertion was responsible for preventing both Fc gamma RII-mediated endocytosis and Fc gamma RII-mediated antigen presentation. The insertion was not required for Fc gamma RII to modulate surface immunoglobulin-triggered B-cell activation. Instead, regulation of activation involved a region of the cytoplasmic domain common to both the lymphocyte and macrophage receptor isoforms. In contrast, the insertion did contribute to the formation of caps in response to receptor cross-linking, consistent with suggestions that the lymphocyte but not macrophage form of the receptor can associate with the detergent-insoluble cytoskeleton."}
pubmed-sentences-benchmark
{"project":"pubmed-sentences-benchmark","denotations":[{"id":"S1","span":{"begin":0,"end":84},"obj":"Sentence"},{"id":"S2","span":{"begin":85,"end":254},"obj":"Sentence"},{"id":"S3","span":{"begin":255,"end":447},"obj":"Sentence"},{"id":"S4","span":{"begin":448,"end":734},"obj":"Sentence"},{"id":"S5","span":{"begin":735,"end":846},"obj":"Sentence"},{"id":"S6","span":{"begin":847,"end":988},"obj":"Sentence"},{"id":"S7","span":{"begin":989,"end":1239},"obj":"Sentence"}],"text":"Cytoplasmic domain heterogeneity and functions of IgG Fc receptors in B lymphocytes.\nB lymphocytes and macrophages express closely related immunoglobulin G (IgG) Fc receptors (Fc gamma RII) that differ only in the structures of their cytoplasmic domains. Because of cell type-specific alternative messenger RNA splicing, B-cell Fc gamma RII contains an insertion of 47 amino acids that participates in determining receptor function in these cells. Transfection of an Fc gamma RII-negative B-cell line with complementary DNA's encoding the two splice products and various receptor mutants indicated that the insertion was responsible for preventing both Fc gamma RII-mediated endocytosis and Fc gamma RII-mediated antigen presentation. The insertion was not required for Fc gamma RII to modulate surface immunoglobulin-triggered B-cell activation. Instead, regulation of activation involved a region of the cytoplasmic domain common to both the lymphocyte and macrophage receptor isoforms. In contrast, the insertion did contribute to the formation of caps in response to receptor cross-linking, consistent with suggestions that the lymphocyte but not macrophage form of the receptor can associate with the detergent-insoluble cytoskeleton."}
GENIAcorpus
{"project":"GENIAcorpus","denotations":[{"id":"T1","span":{"begin":0,"end":32},"obj":"other_name"},{"id":"T2","span":{"begin":50,"end":66},"obj":"protein_family_or_group"},{"id":"T3","span":{"begin":70,"end":83},"obj":"cell_type"},{"id":"T4","span":{"begin":85,"end":98},"obj":"cell_type"},{"id":"T5","span":{"begin":139,"end":155},"obj":"protein_family_or_group"},{"id":"T6","span":{"begin":157,"end":160},"obj":"protein_family_or_group"},{"id":"T7","span":{"begin":176,"end":188},"obj":"protein_family_or_group"},{"id":"T8","span":{"begin":234,"end":253},"obj":"protein_domain_or_region"},{"id":"T9","span":{"begin":297,"end":319},"obj":"other_name"},{"id":"T10","span":{"begin":321,"end":327},"obj":"protein_domain_or_region"},{"id":"T11","span":{"begin":328,"end":340},"obj":"protein_family_or_group"},{"id":"T12","span":{"begin":366,"end":380},"obj":"peptide"},{"id":"T13","span":{"begin":467,"end":479},"obj":"protein_family_or_group"},{"id":"T14","span":{"begin":653,"end":665},"obj":"protein_family_or_group"},{"id":"T15","span":{"begin":691,"end":703},"obj":"protein_family_or_group"},{"id":"T16","span":{"begin":770,"end":782},"obj":"protein_family_or_group"},{"id":"T17","span":{"begin":786,"end":794},"obj":"other_name"},{"id":"T18","span":{"begin":795,"end":817},"obj":"protein_family_or_group"},{"id":"T19","span":{"begin":906,"end":924},"obj":"protein_domain_or_region"},{"id":"T20","span":{"begin":1071,"end":1093},"obj":"other_name"},{"id":"T21","span":{"begin":1206,"end":1238},"obj":"cell_component"}],"text":"Cytoplasmic domain heterogeneity and functions of IgG Fc receptors in B lymphocytes.\nB lymphocytes and macrophages express closely related immunoglobulin G (IgG) Fc receptors (Fc gamma RII) that differ only in the structures of their cytoplasmic domains. Because of cell type-specific alternative messenger RNA splicing, B-cell Fc gamma RII contains an insertion of 47 amino acids that participates in determining receptor function in these cells. Transfection of an Fc gamma RII-negative B-cell line with complementary DNA's encoding the two splice products and various receptor mutants indicated that the insertion was responsible for preventing both Fc gamma RII-mediated endocytosis and Fc gamma RII-mediated antigen presentation. The insertion was not required for Fc gamma RII to modulate surface immunoglobulin-triggered B-cell activation. Instead, regulation of activation involved a region of the cytoplasmic domain common to both the lymphocyte and macrophage receptor isoforms. In contrast, the insertion did contribute to the formation of caps in response to receptor cross-linking, consistent with suggestions that the lymphocyte but not macrophage form of the receptor can associate with the detergent-insoluble cytoskeleton."}