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PubMed:15329359 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-87 Sentence denotes A database analysis of jacalin-like lectins: sequence-structure-function relationships.
TextSentencer_T2 88-236 Sentence denotes Lectins are known to be important for many biological processes, due to their ability to recognize cell surface carbohydrates with high specificity.
TextSentencer_T3 237-439 Sentence denotes Plant lectins have been model systems to study protein-carbohydrate recognition, because individually they exhibit high sensitivity and as a group large diversity in recognizing carbohydrate structures.
TextSentencer_T4 440-700 Sentence denotes Although extensive studies have been carried out for legume lectins that have led to interesting insights into the sequence determinants of sugar recognition in them, frameworks with such specific correlations are not available for other plant lectin families.
TextSentencer_T5 701-1003 Sentence denotes This study reports a large-scale data acquisition and extensive analysis of sequences and structures of beta-prism-I or jacalin-related lectins (JRLs) and shows that hypervariability in the binding site loops generates carbohydrate recognition diversity, a strategy analogous to that in legume lectins.
TextSentencer_T6 1004-1208 Sentence denotes Analyses of the size, conformation, and sequence variability in key regions reveal the existence of a common theme, encoded as a set of structural features over a common scaffold, in defining specificity.
TextSentencer_T7 1209-1352 Sentence denotes This study also points to the remarkable range of domain architectures, often arising out of gene duplication events in lectins of this family.
TextSentencer_T8 1353-1520 Sentence denotes The data analyzed here also indicate a spectacular variety of quaternary associations possible in this family of lectins that have implications for glycan recognition.
TextSentencer_T9 1521-1776 Sentence denotes These results thus provide sequence-structure-function correlations, an understanding of the molecular basis of carbohydrate recognition by beta-prism-I lectins, and also a rationale for engineering specific recognition capabilities in relevant molecules.
T6 1004-1208 Sentence denotes Analyses of the size, conformation, and sequence variability in key regions reveal the existence of a common theme, encoded as a set of structural features over a common scaffold, in defining specificity.
T7 1209-1352 Sentence denotes This study also points to the remarkable range of domain architectures, often arising out of gene duplication events in lectins of this family.
T8 1353-1520 Sentence denotes The data analyzed here also indicate a spectacular variety of quaternary associations possible in this family of lectins that have implications for glycan recognition.
T9 1521-1776 Sentence denotes These results thus provide sequence-structure-function correlations, an understanding of the molecular basis of carbohydrate recognition by beta-prism-I lectins, and also a rationale for engineering specific recognition capabilities in relevant molecules.
T1 0-87 Sentence denotes A database analysis of jacalin-like lectins: sequence-structure-function relationships.
T2 88-236 Sentence denotes Lectins are known to be important for many biological processes, due to their ability to recognize cell surface carbohydrates with high specificity.
T3 237-439 Sentence denotes Plant lectins have been model systems to study protein-carbohydrate recognition, because individually they exhibit high sensitivity and as a group large diversity in recognizing carbohydrate structures.
T4 440-700 Sentence denotes Although extensive studies have been carried out for legume lectins that have led to interesting insights into the sequence determinants of sugar recognition in them, frameworks with such specific correlations are not available for other plant lectin families.
T5 701-1003 Sentence denotes This study reports a large-scale data acquisition and extensive analysis of sequences and structures of beta-prism-I or jacalin-related lectins (JRLs) and shows that hypervariability in the binding site loops generates carbohydrate recognition diversity, a strategy analogous to that in legume lectins.
T1 0-87 Sentence denotes A database analysis of jacalin-like lectins: sequence-structure-function relationships.
T2 88-236 Sentence denotes Lectins are known to be important for many biological processes, due to their ability to recognize cell surface carbohydrates with high specificity.
T3 237-439 Sentence denotes Plant lectins have been model systems to study protein-carbohydrate recognition, because individually they exhibit high sensitivity and as a group large diversity in recognizing carbohydrate structures.
T4 440-700 Sentence denotes Although extensive studies have been carried out for legume lectins that have led to interesting insights into the sequence determinants of sugar recognition in them, frameworks with such specific correlations are not available for other plant lectin families.
T5 701-1003 Sentence denotes This study reports a large-scale data acquisition and extensive analysis of sequences and structures of beta-prism-I or jacalin-related lectins (JRLs) and shows that hypervariability in the binding site loops generates carbohydrate recognition diversity, a strategy analogous to that in legume lectins.
T6 1004-1208 Sentence denotes Analyses of the size, conformation, and sequence variability in key regions reveal the existence of a common theme, encoded as a set of structural features over a common scaffold, in defining specificity.
T7 1209-1352 Sentence denotes This study also points to the remarkable range of domain architectures, often arising out of gene duplication events in lectins of this family.
T8 1353-1520 Sentence denotes The data analyzed here also indicate a spectacular variety of quaternary associations possible in this family of lectins that have implications for glycan recognition.
T9 1521-1776 Sentence denotes These results thus provide sequence-structure-function correlations, an understanding of the molecular basis of carbohydrate recognition by beta-prism-I lectins, and also a rationale for engineering specific recognition capabilities in relevant molecules.

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 810-815 http://www.uniprot.org/uniprot/Q3UZD5 denotes prism
T2 1666-1671 http://www.uniprot.org/uniprot/Q3UZD5 denotes prism

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 126-130 http://purl.bioontology.org/ontology/NCBITAXON/9973 denotes many
T2 378-383 http://purl.bioontology.org/ontology/STY/T096 denotes group
T3 805-809 http://purl.bioontology.org/ontology/NCBITAXON/158455 denotes beta
T4 805-809 http://purl.bioontology.org/ontology/NCBITAXON/3554 denotes beta
T5 829-836 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related
T6 1319-1325 http://purl.bioontology.org/ontology/STY/T051 denotes events
T7 1661-1665 http://purl.bioontology.org/ontology/NCBITAXON/3554 denotes beta
T8 1661-1665 http://purl.bioontology.org/ontology/NCBITAXON/158455 denotes beta

GO-BP

Id Subject Object Predicate Lexical cue
T1 357-368 http://purl.obolibrary.org/obo/GO_0046960 denotes sensitivity

GO-MF

Id Subject Object Predicate Lexical cue
T1 891-898 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T2 891-898 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T3 891-898 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T4 891-898 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T1 187-191 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 187-199 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 449-458 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensive
T2 755-764 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensive
T3 728-733 http://purl.obolibrary.org/obo/UBERON_0002542 denotes scale

Lectin

Id Subject Object Predicate Lexical cue
Lectin_T1 23-30 https://acgg.asia/db/lfdb/LfDB0146 denotes jacalin
Lectin_T2 821-828 https://acgg.asia/db/lfdb/LfDB0146 denotes jacalin

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 580-585 "http://rdf.glycoinfo.org/glycan/G59665TO" denotes sugar
GlycanIUPAC_T2 580-585 "http://rdf.glycoinfo.org/glycan/G32915EI" denotes sugar
GlycanIUPAC_T3 580-585 "http://rdf.glycoinfo.org/glycan/G60625TS" denotes sugar

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 449-458 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensive
PD-UBERON-AE-B_T2 755-764 http://purl.obolibrary.org/obo/UBERON_2000106 denotes extensive
PD-UBERON-AE-B_T3 728-733 http://purl.obolibrary.org/obo/UBERON_0002542 denotes scale

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 728-733 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542