PubMed:1498423
Annnotations
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 698-709 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
| T2 | 1474-1485 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 698-709 | Glycan_Motif | denotes | sialic acid | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T2 | 1474-1485 | Glycan_Motif | denotes | sialic acid | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-98 | Sentence | denotes | Analysis of kidney mRNAs expressed from the rat beta-galactoside alpha 2,6-sialyltransferase gene. |
| TextSentencer_T2 | 99-230 | Sentence | denotes | beta-Galactoside alpha 2,6-sialyltransferase (SiaT-1), like other glycosyltransferases, is differentially expressed in rat tissues. |
| TextSentencer_T3 | 231-348 | Sentence | denotes | Two distinct size classes of SiaT-1 mRNAs expressed in rat kidney are comprised of at least three SiaT-1 transcripts. |
| TextSentencer_T4 | 349-471 | Sentence | denotes | One mRNA, RKE, represents the larger transcript class (4.7 kb) and predicts a polypeptide identical to the hepatic SiaT-1. |
| TextSentencer_T5 | 472-648 | Sentence | denotes | In transfected Chinese hamster ovary (CHO) cells, RKE polypeptides exhibit hemi-perinuclear staining with a SiaT-1 antibody (Ab-267) that is consistent with Golgi localization. |
| TextSentencer_T6 | 649-761 | Sentence | denotes | RKE transfectants display cell-surface alpha 2,6-sialic acid linkages as determined by lectin affinity staining. |
| TextSentencer_T7 | 762-896 | Sentence | denotes | Two other mRNAs, RKA and RKB, are members of a smaller size class (3.6 kb) that comprise predominant SiaT-1 transcripts in rat kidney. |
| TextSentencer_T8 | 897-1056 | Sentence | denotes | Both RKA and RKB encode polypeptides that are missing the amino-terminal 232 residues, but retain 171 amino acids of RKE carboxy-terminal sequence information. |
| TextSentencer_T9 | 1057-1247 | Sentence | denotes | A short, leucine-rich peptide present in the divergent amino-terminus of RKA has sequence similarity to the secretory signal domain of several eukaryotic secretory and cell-surface proteins. |
| TextSentencer_T10 | 1248-1410 | Sentence | denotes | In transfected CHO cells, both RKA and RKB polypeptides display an immunostaining pattern that is distinct from that of the Golgi-associated SiaT-1 protein (RKE). |
| TextSentencer_T11 | 1411-1527 | Sentence | denotes | Furthermore, RKA or RKB transfectants do not display alpha 2,6-sialic acid linkages on cell-surface glycoconjugates. |
| TextSentencer_T12 | 1528-1794 | Sentence | denotes | Consistent with the expression of divergent SiaT-1 mRNAs in rat kidney, protein blot analysis of rat tissue homogenates with Ab-267 reveals that in addition to protein that co-migrates with hepatic SiaT-1, rat kidney expresses a unique size class of SiaT-1 proteins. |
| T1 | 0-98 | Sentence | denotes | Analysis of kidney mRNAs expressed from the rat beta-galactoside alpha 2,6-sialyltransferase gene. |
| T2 | 99-230 | Sentence | denotes | beta-Galactoside alpha 2,6-sialyltransferase (SiaT-1), like other glycosyltransferases, is differentially expressed in rat tissues. |
| T3 | 231-348 | Sentence | denotes | Two distinct size classes of SiaT-1 mRNAs expressed in rat kidney are comprised of at least three SiaT-1 transcripts. |
| T4 | 349-471 | Sentence | denotes | One mRNA, RKE, represents the larger transcript class (4.7 kb) and predicts a polypeptide identical to the hepatic SiaT-1. |
| T5 | 472-648 | Sentence | denotes | In transfected Chinese hamster ovary (CHO) cells, RKE polypeptides exhibit hemi-perinuclear staining with a SiaT-1 antibody (Ab-267) that is consistent with Golgi localization. |
| T6 | 649-761 | Sentence | denotes | RKE transfectants display cell-surface alpha 2,6-sialic acid linkages as determined by lectin affinity staining. |
| T7 | 762-896 | Sentence | denotes | Two other mRNAs, RKA and RKB, are members of a smaller size class (3.6 kb) that comprise predominant SiaT-1 transcripts in rat kidney. |
| T8 | 897-1056 | Sentence | denotes | Both RKA and RKB encode polypeptides that are missing the amino-terminal 232 residues, but retain 171 amino acids of RKE carboxy-terminal sequence information. |
| T9 | 1057-1247 | Sentence | denotes | A short, leucine-rich peptide present in the divergent amino-terminus of RKA has sequence similarity to the secretory signal domain of several eukaryotic secretory and cell-surface proteins. |
| T10 | 1248-1410 | Sentence | denotes | In transfected CHO cells, both RKA and RKB polypeptides display an immunostaining pattern that is distinct from that of the Golgi-associated SiaT-1 protein (RKE). |
| T11 | 1411-1527 | Sentence | denotes | Furthermore, RKA or RKB transfectants do not display alpha 2,6-sialic acid linkages on cell-surface glycoconjugates. |
| T12 | 1528-1794 | Sentence | denotes | Consistent with the expression of divergent SiaT-1 mRNAs in rat kidney, protein blot analysis of rat tissue homogenates with Ab-267 reveals that in addition to protein that co-migrates with hepatic SiaT-1, rat kidney expresses a unique size class of SiaT-1 proteins. |
| T1 | 0-98 | Sentence | denotes | Analysis of kidney mRNAs expressed from the rat beta-galactoside alpha 2,6-sialyltransferase gene. |
| T2 | 99-230 | Sentence | denotes | beta-Galactoside alpha 2,6-sialyltransferase (SiaT-1), like other glycosyltransferases, is differentially expressed in rat tissues. |
| T3 | 231-348 | Sentence | denotes | Two distinct size classes of SiaT-1 mRNAs expressed in rat kidney are comprised of at least three SiaT-1 transcripts. |
| T4 | 349-471 | Sentence | denotes | One mRNA, RKE, represents the larger transcript class (4.7 kb) and predicts a polypeptide identical to the hepatic SiaT-1. |
| T5 | 472-648 | Sentence | denotes | In transfected Chinese hamster ovary (CHO) cells, RKE polypeptides exhibit hemi-perinuclear staining with a SiaT-1 antibody (Ab-267) that is consistent with Golgi localization. |
| T6 | 649-761 | Sentence | denotes | RKE transfectants display cell-surface alpha 2,6-sialic acid linkages as determined by lectin affinity staining. |
| T7 | 762-896 | Sentence | denotes | Two other mRNAs, RKA and RKB, are members of a smaller size class (3.6 kb) that comprise predominant SiaT-1 transcripts in rat kidney. |
| T8 | 897-1056 | Sentence | denotes | Both RKA and RKB encode polypeptides that are missing the amino-terminal 232 residues, but retain 171 amino acids of RKE carboxy-terminal sequence information. |
| T9 | 1057-1247 | Sentence | denotes | A short, leucine-rich peptide present in the divergent amino-terminus of RKA has sequence similarity to the secretory signal domain of several eukaryotic secretory and cell-surface proteins. |
| T10 | 1248-1410 | Sentence | denotes | In transfected CHO cells, both RKA and RKB polypeptides display an immunostaining pattern that is distinct from that of the Golgi-associated SiaT-1 protein (RKE). |
| T11 | 1411-1527 | Sentence | denotes | Furthermore, RKA or RKB transfectants do not display alpha 2,6-sialic acid linkages on cell-surface glycoconjugates. |
| T12 | 1528-1794 | Sentence | denotes | Consistent with the expression of divergent SiaT-1 mRNAs in rat kidney, protein blot analysis of rat tissue homogenates with Ab-267 reveals that in addition to protein that co-migrates with hepatic SiaT-1, rat kidney expresses a unique size class of SiaT-1 proteins. |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 698-709 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
| T2 | 1474-1485 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acid |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 12-18 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T2 | 290-296 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T3 | 889-895 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T4 | 1592-1598 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T5 | 1738-1744 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 12-18 | FMAID:7203 | denotes | kidney |
| _T2 | 12-18 | FMAID:93681 | denotes | kidney |
| _T3 | 19-24 | FMAID:199098 | denotes | mRNAs |
| _T4 | 93-97 | FMAID:198663 | denotes | gene |
| _T5 | 222-229 | FMAID:256050 | denotes | tissues |
| _T6 | 267-272 | FMAID:199098 | denotes | mRNAs |
| _T7 | 290-296 | FMAID:93681 | denotes | kidney |
| _T8 | 290-296 | FMAID:7203 | denotes | kidney |
| _T9 | 503-508 | FMAID:7209 | denotes | ovary |
| _T10 | 503-508 | FMAID:93687 | denotes | ovary |
| _T11 | 515-520 | FMAID:169002 | denotes | cells |
| _T12 | 515-520 | FMAID:68646 | denotes | cells |
| _T13 | 587-595 | FMAID:167180 | denotes | antibody |
| _T14 | 675-687 | FMAID:200942 | denotes | cell-surface |
| _T15 | 675-687 | FMAID:212684 | denotes | cell-surface |
| _T16 | 680-687 | FMAID:50594 | denotes | surface |
| _T17 | 680-687 | FMAID:146300 | denotes | surface |
| _T18 | 772-777 | FMAID:199098 | denotes | mRNAs |
| _T19 | 889-895 | FMAID:93681 | denotes | kidney |
| _T20 | 889-895 | FMAID:7203 | denotes | kidney |
| _T21 | 999-1010 | FMAID:82739 | denotes | amino acids |
| _T22 | 999-1010 | FMAID:196728 | denotes | amino acids |
| _T23 | 1066-1073 | FMAID:82757 | denotes | leucine |
| _T24 | 1066-1073 | FMAID:196746 | denotes | leucine |
| _T25 | 1225-1237 | FMAID:200942 | denotes | cell-surface |
| _T26 | 1225-1237 | FMAID:212684 | denotes | cell-surface |
| _T27 | 1230-1237 | FMAID:146300 | denotes | surface |
| _T28 | 1230-1237 | FMAID:50594 | denotes | surface |
| _T29 | 1238-1246 | FMAID:165447 | denotes | proteins |
| _T30 | 1238-1246 | FMAID:67257 | denotes | proteins |
| _T31 | 1267-1272 | FMAID:68646 | denotes | cells |
| _T32 | 1267-1272 | FMAID:169002 | denotes | cells |
| _T33 | 1396-1403 | FMAID:165447 | denotes | protein |
| _T34 | 1396-1403 | FMAID:67257 | denotes | protein |
| _T35 | 1498-1510 | FMAID:212684 | denotes | cell-surface |
| _T36 | 1498-1510 | FMAID:200942 | denotes | cell-surface |
| _T37 | 1503-1510 | FMAID:146300 | denotes | surface |
| _T38 | 1503-1510 | FMAID:50594 | denotes | surface |
| _T39 | 1511-1526 | FMAID:82782 | denotes | glycoconjugates |
| _T40 | 1511-1526 | FMAID:196776 | denotes | glycoconjugates |
| _T41 | 1579-1584 | FMAID:199098 | denotes | mRNAs |
| _T42 | 1592-1598 | FMAID:93681 | denotes | kidney |
| _T43 | 1592-1598 | FMAID:7203 | denotes | kidney |
| _T44 | 1600-1607 | FMAID:67257 | denotes | protein |
| _T45 | 1600-1607 | FMAID:165447 | denotes | protein |
| _T46 | 1629-1635 | FMAID:256050 | denotes | tissue |
| _T47 | 1688-1695 | FMAID:165447 | denotes | protein |
| _T48 | 1688-1695 | FMAID:67257 | denotes | protein |
| _T49 | 1738-1744 | FMAID:93681 | denotes | kidney |
| _T50 | 1738-1744 | FMAID:7203 | denotes | kidney |
| _T51 | 1785-1793 | FMAID:165447 | denotes | proteins |
| _T52 | 1785-1793 | FMAID:67257 | denotes | proteins |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 48-52 | http://purl.bioontology.org/ontology/NCBITAXON/3554 | denotes | beta |
| T2 | 48-52 | http://purl.bioontology.org/ontology/NCBITAXON/158455 | denotes | beta |
| T3 | 99-103 | http://purl.bioontology.org/ontology/NCBITAXON/3554 | denotes | beta |
| T4 | 99-103 | http://purl.bioontology.org/ontology/NCBITAXON/158455 | denotes | beta |
| T5 | 222-229 | http://purl.bioontology.org/ontology/STY/T024 | denotes | tissues |
| T6 | 515-520 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T7 | 1200-1210 | http://purl.bioontology.org/ontology/NCBITAXON/2759 | denotes | eukaryotic |
| T8 | 1267-1272 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T9 | 1629-1635 | http://purl.bioontology.org/ontology/STY/T024 | denotes | tissue |
| T10 | 1701-1703 | http://purl.bioontology.org/ontology/NCBITAXON/13893 | denotes | co |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 145-149 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T2 | 260-264 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T3 | 329-333 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T4 | 464-468 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T5 | 580-584 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T6 | 863-867 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T7 | 1389-1393 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T8 | 1572-1576 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T9 | 1726-1730 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T10 | 1778-1782 | http://purl.obolibrary.org/obo/GO_0008118 | denotes | SiaT |
| T11 | 336-347 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcripts |
| T12 | 386-396 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcript |
| T13 | 510-513 | http://purl.obolibrary.org/obo/GO_0043848 | denotes | CHO |
| T14 | 1263-1266 | http://purl.obolibrary.org/obo/GO_0043848 | denotes | CHO |
| T15 | 629-647 | http://purl.obolibrary.org/obo/GO_0051645 | denotes | Golgi localization |
| T16 | 635-647 | http://purl.obolibrary.org/obo/GO_0051179 | denotes | localization |
| T17 | 1175-1181 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signal |
| T18 | 1225-1246 | http://purl.obolibrary.org/obo/GO_0034394 | denotes | cell-surface proteins |
| T19 | 1225-1246 | http://purl.obolibrary.org/obo/GO_0033575 | denotes | cell-surface proteins |
| T20 | 1225-1246 | http://purl.obolibrary.org/obo/GO_0033580 | denotes | cell-surface proteins |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 587-595 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 515-520 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T2 | 675-679 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T3 | 1225-1229 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T4 | 1498-1502 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T5 | 629-634 | http://purl.obolibrary.org/obo/GO_0005794 | denotes | Golgi |
| T6 | 1372-1377 | http://purl.obolibrary.org/obo/GO_0005794 | denotes | Golgi |
| T7 | 675-687 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell-surface |
| T8 | 1225-1237 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell-surface |
| T9 | 1498-1510 | http://purl.obolibrary.org/obo/GO_0009986 | denotes | cell-surface |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 12-18 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T2 | 290-296 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T3 | 889-895 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T4 | 1592-1598 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T5 | 1738-1744 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T6 | 222-229 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissues |
| T7 | 1629-1635 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
EDAM-topics
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 19-24 | http://edamontology.org/topic_3512 | denotes | mRNAs |
| T2 | 267-272 | http://edamontology.org/topic_3512 | denotes | mRNAs |
| T3 | 336-347 | http://edamontology.org/topic_0110 | denotes | transcripts |
| T4 | 336-347 | http://edamontology.org/topic_0203 | denotes | transcripts |
| T5 | 336-347 | http://edamontology.org/topic_3308 | denotes | transcripts |
| T6 | 336-347 | http://edamontology.org/topic_3512 | denotes | transcripts |
| T7 | 386-396 | http://edamontology.org/topic_3512 | denotes | transcript |
| T8 | 386-396 | http://edamontology.org/topic_3308 | denotes | transcript |
| T9 | 386-396 | http://edamontology.org/topic_0203 | denotes | transcript |
| T10 | 386-396 | http://edamontology.org/topic_0110 | denotes | transcript |
| T11 | 710-718 | http://edamontology.org/topic_0102 | denotes | linkages |
| T12 | 772-777 | http://edamontology.org/topic_3512 | denotes | mRNAs |
| T13 | 870-881 | http://edamontology.org/topic_0110 | denotes | transcripts |
| T14 | 870-881 | http://edamontology.org/topic_0203 | denotes | transcripts |
| T15 | 870-881 | http://edamontology.org/topic_3308 | denotes | transcripts |
| T16 | 870-881 | http://edamontology.org/topic_3512 | denotes | transcripts |
| T17 | 961-969 | http://edamontology.org/topic_0749 | denotes | terminal |
| T18 | 999-1010 | http://edamontology.org/topic_0154 | denotes | amino acids |
| T19 | 1026-1034 | http://edamontology.org/topic_0749 | denotes | terminal |
| T20 | 1035-1043 | http://edamontology.org/topic_3168 | denotes | sequence |
| T21 | 1035-1043 | http://edamontology.org/topic_0080 | denotes | sequence |
| T22 | 1079-1086 | http://edamontology.org/topic_0154 | denotes | peptide |
| T23 | 1138-1146 | http://edamontology.org/topic_0080 | denotes | sequence |
| T24 | 1138-1146 | http://edamontology.org/topic_3168 | denotes | sequence |
| T25 | 1200-1210 | http://edamontology.org/topic_2818 | denotes | eukaryotic |
| T26 | 1238-1246 | http://edamontology.org/topic_0078 | denotes | proteins |
| T27 | 1396-1403 | http://edamontology.org/topic_0078 | denotes | protein |
| T28 | 1486-1494 | http://edamontology.org/topic_0102 | denotes | linkages |
| T29 | 1579-1584 | http://edamontology.org/topic_3512 | denotes | mRNAs |
| T30 | 1600-1607 | http://edamontology.org/topic_0078 | denotes | protein |
| T31 | 1688-1695 | http://edamontology.org/topic_0078 | denotes | protein |
| T32 | 1785-1793 | http://edamontology.org/topic_0078 | denotes | proteins |
EDAM-DFO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-8 | http://edamontology.org/operation_2945 | denotes | Analysis |
| T2 | 190-214 | http://edamontology.org/operation_3742 | denotes | differentially expressed |
| T3 | 416-424 | http://edamontology.org/operation_2423 | denotes | predicts |
| T4 | 870-884 | http://edamontology.org/data_2769 | denotes | transcripts in |
| T5 | 974-982 | http://edamontology.org/data_1756 | denotes | residues |
| T6 | 1035-1043 | http://edamontology.org/operation_3218 | denotes | sequence |
| T7 | 1035-1043 | http://edamontology.org/data_2044 | denotes | sequence |
| T8 | 1035-1055 | http://edamontology.org/data_1771 | denotes | sequence information |
| T9 | 1079-1086 | http://edamontology.org/data_2906 | denotes | peptide |
| T10 | 1138-1146 | http://edamontology.org/data_2044 | denotes | sequence |
| T11 | 1138-1146 | http://edamontology.org/operation_3218 | denotes | sequence |
| T12 | 1138-1157 | http://edamontology.org/data_1413 | denotes | sequence similarity |
| T13 | 1138-1157 | http://edamontology.org/data_0865 | denotes | sequence similarity |
| T14 | 1138-1157 | http://edamontology.org/data_2161 | denotes | sequence similarity |
| T15 | 1238-1246 | http://edamontology.org/format_1208 | denotes | proteins |
| T16 | 1238-1246 | http://edamontology.org/data_1467 | denotes | proteins |
| T17 | 1396-1403 | http://edamontology.org/data_1467 | denotes | protein |
| T18 | 1396-1403 | http://edamontology.org/format_1208 | denotes | protein |
| T19 | 1600-1607 | http://edamontology.org/data_1467 | denotes | protein |
| T20 | 1600-1607 | http://edamontology.org/format_1208 | denotes | protein |
| T21 | 1600-1621 | http://edamontology.org/operation_2502 | denotes | protein blot analysis |
| T22 | 1613-1621 | http://edamontology.org/operation_2945 | denotes | analysis |
| T23 | 1688-1695 | http://edamontology.org/format_1208 | denotes | protein |
| T24 | 1688-1695 | http://edamontology.org/data_1467 | denotes | protein |
| T25 | 1785-1793 | http://edamontology.org/format_1208 | denotes | proteins |
| T26 | 1785-1793 | http://edamontology.org/data_1467 | denotes | proteins |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 12-18 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T2 | 290-296 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T3 | 889-895 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T4 | 1592-1598 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
| T5 | 1738-1744 | http://purl.obolibrary.org/obo/MAT_0000119 | denotes | kidney |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 222-229 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissues |
| PD-UBERON-AE-B_T2 | 1629-1635 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| PD-UBERON-AE-B_T3 | 12-18 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| PD-UBERON-AE-B_T4 | 290-296 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| PD-UBERON-AE-B_T5 | 889-895 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| PD-UBERON-AE-B_T6 | 1592-1598 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| PD-UBERON-AE-B_T7 | 1738-1744 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 12-18 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/MAT_0000119 |
| T2 | 290-296 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/MAT_0000119 |
| T3 | 889-895 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/MAT_0000119 |
| T4 | 1592-1598 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/MAT_0000119 |
| T5 | 1738-1744 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/MAT_0000119 |
Lectin-Jamboree
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 736-742 | lectin | denotes | lectin |
Lectin-Jamboree-Sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-98 | Sentence | denotes | Analysis of kidney mRNAs expressed from the rat beta-galactoside alpha 2,6-sialyltransferase gene. |
| T2 | 99-230 | Sentence | denotes | beta-Galactoside alpha 2,6-sialyltransferase (SiaT-1), like other glycosyltransferases, is differentially expressed in rat tissues. |
| T3 | 231-348 | Sentence | denotes | Two distinct size classes of SiaT-1 mRNAs expressed in rat kidney are comprised of at least three SiaT-1 transcripts. |
| T4 | 349-471 | Sentence | denotes | One mRNA, RKE, represents the larger transcript class (4.7 kb) and predicts a polypeptide identical to the hepatic SiaT-1. |
| T5 | 472-648 | Sentence | denotes | In transfected Chinese hamster ovary (CHO) cells, RKE polypeptides exhibit hemi-perinuclear staining with a SiaT-1 antibody (Ab-267) that is consistent with Golgi localization. |
| T6 | 649-761 | Sentence | denotes | RKE transfectants display cell-surface alpha 2,6-sialic acid linkages as determined by lectin affinity staining. |
| T7 | 762-896 | Sentence | denotes | Two other mRNAs, RKA and RKB, are members of a smaller size class (3.6 kb) that comprise predominant SiaT-1 transcripts in rat kidney. |
| T8 | 897-1056 | Sentence | denotes | Both RKA and RKB encode polypeptides that are missing the amino-terminal 232 residues, but retain 171 amino acids of RKE carboxy-terminal sequence information. |
| T9 | 1057-1247 | Sentence | denotes | A short, leucine-rich peptide present in the divergent amino-terminus of RKA has sequence similarity to the secretory signal domain of several eukaryotic secretory and cell-surface proteins. |
| T10 | 1248-1410 | Sentence | denotes | In transfected CHO cells, both RKA and RKB polypeptides display an immunostaining pattern that is distinct from that of the Golgi-associated SiaT-1 protein (RKE). |
| T11 | 1411-1527 | Sentence | denotes | Furthermore, RKA or RKB transfectants do not display alpha 2,6-sialic acid linkages on cell-surface glycoconjugates. |
| T12 | 1528-1794 | Sentence | denotes | Consistent with the expression of divergent SiaT-1 mRNAs in rat kidney, protein blot analysis of rat tissue homogenates with Ab-267 reveals that in addition to protein that co-migrates with hepatic SiaT-1, rat kidney expresses a unique size class of SiaT-1 proteins. |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 44-47 | OrganismTaxon | denotes | rat | 10114|10116 |
| T3 | 218-221 | OrganismTaxon | denotes | rat | 10114|10116 |
| T5 | 286-289 | OrganismTaxon | denotes | rat | 10114|10116 |
| T7 | 487-502 | OrganismTaxon | denotes | Chinese hamster | 10029 |
| T8 | 885-888 | OrganismTaxon | denotes | rat | 10114|10116 |
| T10 | 1588-1591 | OrganismTaxon | denotes | rat | 10114|10116 |
| T12 | 1625-1628 | OrganismTaxon | denotes | rat | 10114|10116 |
| T14 | 1734-1737 | OrganismTaxon | denotes | rat | 10114|10116 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 12-18 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T2 | 290-296 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T3 | 503-508 | Body_part | denotes | ovary | http://purl.obolibrary.org/obo/UBERON_0000992 |
| T4 | 629-634 | Body_part | denotes | Golgi | http://purl.obolibrary.org/obo/GO_0005794 |
| T5 | 889-895 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T6 | 1211-1229 | Body_part | denotes | secretory and cell | http://purl.obolibrary.org/obo/CL_0000151 |
| T7 | 1372-1377 | Body_part | denotes | Golgi | http://purl.obolibrary.org/obo/GO_0005794 |
| T8 | 1592-1598 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T9 | 1629-1635 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T10 | 1738-1744 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 1211-1229 | Cell | denotes | secretory and cell | http://purl.obolibrary.org/obo/CL:0000151 |