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PubMed:14770434 JSONTXT

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PubMed_Structured_Abstracts

Id Subject Object Predicate Lexical cue
T1 145-662 BACKGROUND denotes Although the majority of children with acute lymphoblastic leukemia (ALL) are cured with combination chemotherapy containing methotrexate (MTX), drug resistance contributes to treatment failure for a substantial fraction of patients. The primary transporter for folates and MTX is the reduced folate carrier (RFC). Impaired drug transport is a documented mechanism of MTX resistance in patients with ALL; however, to the authors' knowledge it is not known whether inactivating RFC mutations are a contributing factor.
T2 672-1168 METHODS denotes The authors devised a genomic polymerase chain reaction-single strand conformational polymorphism assay followed by sequencing and screened the entire RFC coding region for sequence alterations in DNA from 246 leukemia specimens from patients with diverse ethnic variation, 24 at the time of recurrence and the rest at the time of diagnosis. This cohort was comprised of 203 B-precursor ALL specimens (82.5%), 32 T-lineage ALL specimens (13%), and 11 acute myeloblastic leukemia specimens (4.5%).
T3 1178-1600 RESULTS denotes Of 246 DNA samples, only 3 diagnosis B-precursor ALL specimens (1.2%) were found to harbor alterations in the RFC gene, including heterozygous single nucleotide changes resulting in D56H and D522N substitutions in the first extracellular loop and the C-terminus of this transporter, respectively. The third sample had a sequence alteration in exon 3 that could not be identified because of the lack of availability of DNA.
T4 1614-1971 CONCLUSIONS denotes Whereas inactivating RFC mutations are a frequent mechanism of MTX resistance in human leukemia cell lines and in patients with osteosarcoma, they are not common and do not appear to play any significant role in intrinsic or acquired resistance to MTX in childhood leukemia. This is the first study of RFC mutations in multiple pediatric leukemia specimens.

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 184-212 HP_0006721 denotes acute lymphoblastic leukemia
T2 204-212 HP_0001909 denotes leukemia

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
14770434-6#191#196#geners58836581 1369-1374 geners58836581 denotes D522N
14770434-6#182#186#geners146321452 1360-1364 geners146321452 denotes D56H
14770434-6#37#52#diseaseC1292769 1215-1230 diseaseC1292769 denotes B-precursor ALL
191#196#geners5883658137#52#diseaseC1292769 14770434-6#191#196#geners58836581 14770434-6#37#52#diseaseC1292769 associated_with D522N,B-precursor ALL
182#186#geners14632145237#52#diseaseC1292769 14770434-6#182#186#geners146321452 14770434-6#37#52#diseaseC1292769 associated_with D56H,B-precursor ALL

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
14770434-6#110#113#gene5981 1288-1291 gene5981 denotes RFC
14770434-6#110#113#gene6573 1288-1291 gene6573 denotes RFC
14770434-6#37#52#diseaseC1292769 1215-1230 diseaseC1292769 denotes B-precursor ALL
110#113#gene598137#52#diseaseC1292769 14770434-6#110#113#gene5981 14770434-6#37#52#diseaseC1292769 associated_with RFC,B-precursor ALL
110#113#gene657337#52#diseaseC1292769 14770434-6#110#113#gene6573 14770434-6#37#52#diseaseC1292769 associated_with RFC,B-precursor ALL

DisGeNET

Id Subject Object Predicate Lexical cue
T0 1288-1291 gene:6573 denotes RFC
T1 1215-1230 disease:C1292769 denotes B-precursor ALL
R1 T0 T1 associated_with RFC,B-precursor ALL