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PubMed:1316718 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-93 Sentence denotes Coincident Kaposi sarcoma and T-cell lymphoma in a patient with the Wiskott-Aldrich syndrome.
TextSentencer_T2 94-344 Sentence denotes A 24 year old male with a history of eczema, recurrent mild infections, and thrombocytopenia consistent with the Wiskott-Aldrich syndrome (WAS) presented with a mediastinal mass, generalized lymphadenopathy, splenomegaly, and severe thrombocytopenia.
TextSentencer_T3 345-435 Sentence denotes Studies of immune function including immunoglobulin levels and T-cell subsets were normal.
TextSentencer_T4 436-595 Sentence denotes Furthermore, his T lymphocytes proliferated normally in response to phytohemagglutinin, concanavalin A, and the combination of neuraminidase/galactose oxidase.
TextSentencer_T5 596-734 Sentence denotes However, their proliferative responses to anti-CD43 antibody and periodate were diminished, consistent with the clinical diagnosis of WAS.
TextSentencer_T6 735-810 Sentence denotes An initial inguinal lymph node biopsy surprisingly revealed Kaposi sarcoma.
TextSentencer_T7 811-941 Sentence denotes However, following splenectomy to increase the platelet count, biopsy of the mediastinal mass revealed T-cell large cell lymphoma.
TextSentencer_T8 942-1169 Sentence denotes Studies of biopsied tissue for the presence of Epstein-Barr virus and cytomegalovirus were negative, as were studies of blood, including the polymerase chain reaction, for the presence of the human immunodeficiency virus (HIV).
TextSentencer_T9 1170-1278 Sentence denotes This is the first report of Kaposi sarcoma arising in a patient with a congenital immunodeficiency syndrome.
TextSentencer_T10 1279-1571 Sentence denotes Although Kaposi sarcoma can arise in the face of the severe immunosuppression that follows allograft transplantation and in patients infected with HIV, we postulate that longevity in the face of mild immunosuppression was the major factor in the development of Kaposi sarcoma in this patient.
T1 0-93 Sentence denotes Coincident Kaposi sarcoma and T-cell lymphoma in a patient with the Wiskott-Aldrich syndrome.
T2 94-344 Sentence denotes A 24 year old male with a history of eczema, recurrent mild infections, and thrombocytopenia consistent with the Wiskott-Aldrich syndrome (WAS) presented with a mediastinal mass, generalized lymphadenopathy, splenomegaly, and severe thrombocytopenia.
T3 345-435 Sentence denotes Studies of immune function including immunoglobulin levels and T-cell subsets were normal.
T4 436-595 Sentence denotes Furthermore, his T lymphocytes proliferated normally in response to phytohemagglutinin, concanavalin A, and the combination of neuraminidase/galactose oxidase.
T5 596-734 Sentence denotes However, their proliferative responses to anti-CD43 antibody and periodate were diminished, consistent with the clinical diagnosis of WAS.
T6 735-810 Sentence denotes An initial inguinal lymph node biopsy surprisingly revealed Kaposi sarcoma.
T7 811-941 Sentence denotes However, following splenectomy to increase the platelet count, biopsy of the mediastinal mass revealed T-cell large cell lymphoma.
T8 942-1169 Sentence denotes Studies of biopsied tissue for the presence of Epstein-Barr virus and cytomegalovirus were negative, as were studies of blood, including the polymerase chain reaction, for the presence of the human immunodeficiency virus (HIV).
T9 1170-1278 Sentence denotes This is the first report of Kaposi sarcoma arising in a patient with a congenital immunodeficiency syndrome.
T10 1279-1571 Sentence denotes Although Kaposi sarcoma can arise in the face of the severe immunosuppression that follows allograft transplantation and in patients infected with HIV, we postulate that longevity in the face of mild immunosuppression was the major factor in the development of Kaposi sarcoma in this patient.

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
1316718-1#173#177#gene2200 267-271 gene2200 denotes mass
1316718-1#76#92#diseaseC0040034 170-186 diseaseC0040034 denotes thrombocytopenia
1316718-1#113#137#diseaseC0043194 207-231 diseaseC0043194 denotes Wiskott-Aldrich syndrome
1316718-1#139#142#diseaseC0043194 233-236 diseaseC0043194 denotes WAS
1316718-1#233#249#diseaseC0040034 327-343 diseaseC0040034 denotes thrombocytopenia
1316718-4#47#51#gene6693 643-647 gene6693 denotes CD43
1316718-4#134#137#diseaseC0043194 730-733 diseaseC0043194 denotes WAS
173#177#gene220076#92#diseaseC0040034 1316718-1#173#177#gene2200 1316718-1#76#92#diseaseC0040034 associated_with mass,thrombocytopenia
173#177#gene2200113#137#diseaseC0043194 1316718-1#173#177#gene2200 1316718-1#113#137#diseaseC0043194 associated_with mass,Wiskott-Aldrich syndrome
173#177#gene2200139#142#diseaseC0043194 1316718-1#173#177#gene2200 1316718-1#139#142#diseaseC0043194 associated_with mass,WAS
173#177#gene2200233#249#diseaseC0040034 1316718-1#173#177#gene2200 1316718-1#233#249#diseaseC0040034 associated_with mass,thrombocytopenia
47#51#gene6693134#137#diseaseC0043194 1316718-4#47#51#gene6693 1316718-4#134#137#diseaseC0043194 associated_with CD43,WAS

PubCasesHPO

Id Subject Object Predicate Lexical cue
TI1 18-25 HP:0100242 denotes sarcoma
TI2 30-45 HP:0012190 denotes T-cell lymphoma
AB1 170-186 HP:0001873 denotes thrombocytopenia
AB2 273-300 HP:0008940 denotes generalized lymphadenopathy
AB3 302-314 HP:0001744 denotes splenomegaly
AB4 327-343 HP:0001873 denotes thrombocytopenia
AB5 802-809 HP:0100242 denotes sarcoma
AB6 932-940 HP:0002665 denotes lymphoma
AB7 1140-1156 HP:0002721 denotes immunodeficiency
AB8 1205-1212 HP:0100242 denotes sarcoma
AB9 1252-1268 HP:0002721 denotes immunodeficiency
AB10 1295-1302 HP:0100242 denotes sarcoma
AB11 1547-1554 HP:0100242 denotes sarcoma

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 746-765 http://purl.obolibrary.org/obo/UBERON_0001542 denotes inguinal lymph node
PD-UBERON-AE-B_T2 755-760 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
PD-UBERON-AE-B_T3 755-765 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph node
PD-UBERON-AE-B_T4 962-968 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T5 1062-1067 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
PD-UBERON-AE-B_T6 1320-1324 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
PD-UBERON-AE-B_T7 1466-1470 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face

PubCasesORDO

Id Subject Object Predicate Lexical cue
TI1 11-25 ORDO:33276 denotes Kaposi sarcoma
TI2 68-92 ORDO:906 denotes Wiskott-Aldrich syndrome
AB1 207-231 ORDO:906 denotes Wiskott-Aldrich syndrome
AB2 795-809 ORDO:33276 denotes Kaposi sarcoma
AB3 1198-1212 ORDO:33276 denotes Kaposi sarcoma
AB4 1288-1302 ORDO:33276 denotes Kaposi sarcoma
AB5 1540-1554 ORDO:33276 denotes Kaposi sarcoma

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1062-1067 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
PD-UBERON-AE-B_T2 962-968 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T3 1320-1324 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
PD-UBERON-AE-B_T4 1466-1470 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
PD-UBERON-AE-B_T5 746-765 http://purl.obolibrary.org/obo/UBERON_0001542 denotes inguinal lymph node
PD-UBERON-AE-B_T6 755-760 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
PD-UBERON-AE-B_T7 755-765 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph node

NCBIDiseaseCorpus

Id Subject Object Predicate Lexical cue
T1 11-25 SpecificDisease:D012514 denotes Kaposi sarcoma
T2 30-45 SpecificDisease:D016399 denotes T-cell lymphoma
T3 68-92 SpecificDisease:D014923 denotes Wiskott-Aldrich syndrome
T4 131-137 DiseaseClass:D004485 denotes eczema
T5 170-186 SpecificDisease:D013921 denotes thrombocytopenia
T6 207-231 SpecificDisease:D014923 denotes Wiskott-Aldrich syndrome
T7 233-236 SpecificDisease:D014923 denotes WAS
T8 285-300 SpecificDisease:D008206 denotes lymphadenopathy
T9 302-314 SpecificDisease:D013163 denotes splenomegaly
T10 327-343 SpecificDisease:D013921 denotes thrombocytopenia
T11 730-733 SpecificDisease:D014923 denotes WAS
T12 795-809 SpecificDisease:D012514 denotes Kaposi sarcoma
T13 914-940 SpecificDisease:D016399 denotes T-cell large cell lymphoma
T14 989-1007 SpecificDisease:D020031 denotes Epstein-Barr virus
T15 1012-1027 SpecificDisease:D003586 denotes cytomegalovirus
T16 1134-1162 SpecificDisease:D015658 denotes human immunodeficiency virus
T17 1164-1167 SpecificDisease:D015658 denotes HIV
T18 1198-1212 SpecificDisease:D012514 denotes Kaposi sarcoma
T19 1241-1277 DiseaseClass:D007153 denotes congenital immunodeficiency syndrome
T20 1288-1302 SpecificDisease:D012514 denotes Kaposi sarcoma
T21 1426-1429 SpecificDisease:D015658 denotes HIV
T22 1540-1554 SpecificDisease:D012514 denotes Kaposi sarcoma

DisGeNET

Id Subject Object Predicate Lexical cue
T0 643-647 gene:6693 denotes CD43
T1 730-733 disease:C0043194 denotes WAS
T2 643-647 gene:101929889 denotes CD43
T3 730-733 disease:C0043194 denotes WAS
R1 T0 T1 associated_with CD43,WAS
R2 T2 T3 associated_with CD43,WAS

NCBI-Disease-Train

Id Subject Object Predicate Lexical cue database_id
T1057 11-25 SpecificDisease denotes Kaposi sarcoma D012514
T1058 30-45 SpecificDisease denotes T-cell lymphoma D016399
T1059 68-92 SpecificDisease denotes Wiskott-Aldrich syndrome D014923
T1060 131-137 DiseaseClass denotes eczema D004485
T1061 170-186 SpecificDisease denotes thrombocytopenia D013921
T1062 207-231 SpecificDisease denotes Wiskott-Aldrich syndrome D014923
T1063 233-236 SpecificDisease denotes WAS D014923
T1064 285-300 SpecificDisease denotes lymphadenopathy D008206
T1065 302-314 SpecificDisease denotes splenomegaly D013163
T1066 327-343 SpecificDisease denotes thrombocytopenia D013921
T1067 730-733 SpecificDisease denotes WAS D014923
T1068 795-809 SpecificDisease denotes Kaposi sarcoma D012514
T1069 914-940 SpecificDisease denotes T-cell large cell lymphoma D016399
T1070 989-1007 SpecificDisease denotes Epstein-Barr virus D020031
T1071 1012-1027 SpecificDisease denotes cytomegalovirus D003586
T1072 1134-1162 SpecificDisease denotes human immunodeficiency virus D015658
T1073 1164-1167 SpecificDisease denotes HIV D015658
T1074 1198-1212 SpecificDisease denotes Kaposi sarcoma D012514
T1075 1241-1277 DiseaseClass denotes congenital immunodeficiency syndrome D007153
T1076 1288-1302 SpecificDisease denotes Kaposi sarcoma D012514
T1077 1426-1429 SpecificDisease denotes HIV D015658
T1078 1540-1554 SpecificDisease denotes Kaposi sarcoma D012514

NCBI-Disease-Corpus-All

Id Subject Object Predicate Lexical cue database_id
T1057 11-25 SpecificDisease denotes Kaposi sarcoma D012514
T1058 30-45 SpecificDisease denotes T-cell lymphoma D016399
T1059 68-92 SpecificDisease denotes Wiskott-Aldrich syndrome D014923
T1060 131-137 DiseaseClass denotes eczema D004485
T1061 170-186 SpecificDisease denotes thrombocytopenia D013921
T1062 207-231 SpecificDisease denotes Wiskott-Aldrich syndrome D014923
T1063 233-236 SpecificDisease denotes WAS D014923
T1064 285-300 SpecificDisease denotes lymphadenopathy D008206
T1065 302-314 SpecificDisease denotes splenomegaly D013163
T1066 327-343 SpecificDisease denotes thrombocytopenia D013921
T1067 730-733 SpecificDisease denotes WAS D014923
T1068 795-809 SpecificDisease denotes Kaposi sarcoma D012514
T1069 914-940 SpecificDisease denotes T-cell large cell lymphoma D016399
T1070 989-1007 SpecificDisease denotes Epstein-Barr virus D020031
T1071 1012-1027 SpecificDisease denotes cytomegalovirus D003586
T1072 1134-1162 SpecificDisease denotes human immunodeficiency virus D015658
T1073 1164-1167 SpecificDisease denotes HIV D015658
T1074 1198-1212 SpecificDisease denotes Kaposi sarcoma D012514
T1075 1241-1277 DiseaseClass denotes congenital immunodeficiency syndrome D007153
T1076 1288-1302 SpecificDisease denotes Kaposi sarcoma D012514
T1077 1426-1429 SpecificDisease denotes HIV D015658
T1078 1540-1554 SpecificDisease denotes Kaposi sarcoma D012514

NCBI-Disease-Corpus-2stage-All

Id Subject Object Predicate Lexical cue
T1 11-25 SpecificDisease denotes Kaposi sarcoma
T2 30-45 SpecificDisease denotes T-cell lymphoma
T3 68-92 SpecificDisease denotes Wiskott-Aldrich syndrome
T4 207-231 SpecificDisease denotes Wiskott-Aldrich syndrome
T5 730-733 SpecificDisease denotes WAS
T6 795-809 SpecificDisease denotes Kaposi sarcoma
T7 914-940 SpecificDisease denotes T-cell large cell lymphoma
T8 1134-1162 Modifier denotes human immunodeficiency virus
T9 1198-1212 SpecificDisease denotes Kaposi sarcoma
T10 1288-1302 SpecificDisease denotes Kaposi sarcoma
T11 1426-1429 Modifier denotes HIV
T12 1540-1554 SpecificDisease denotes Kaposi sarcoma

NCBI-Disease-Corpus-rezarta-All

Id Subject Object Predicate Lexical cue
T1 11-25 CompositeMention denotes Kaposi sarcoma
T2 30-45 CompositeMention denotes T-cell lymphoma
T3 68-92 SpecificDisease denotes Wiskott-Aldrich syndrome
T4 207-231 SpecificDisease denotes Wiskott-Aldrich syndrome
T5 730-733 SpecificDisease denotes WAS
T6 795-809 CompositeMention denotes Kaposi sarcoma
T7 914-940 SpecificDisease denotes T-cell large cell lymphoma
T8 1164-1167 Modifier denotes HIV
T9 1198-1212 CompositeMention denotes Kaposi sarcoma
T10 1288-1302 CompositeMention denotes Kaposi sarcoma
T11 1426-1429 SpecificDisease denotes HIV
T12 1540-1554 CompositeMention denotes Kaposi sarcoma

NCBI-Disease-Corpus-4oGuideline-All

Id Subject Object Predicate Lexical cue
T1 11-45 CompositeMention denotes Kaposi sarcoma and T-cell lymphoma
T2 68-92 SpecificDisease denotes Wiskott-Aldrich syndrome
T3 207-231 SpecificDisease denotes Wiskott-Aldrich syndrome
T4 730-733 SpecificDisease denotes WAS
T5 795-809 SpecificDisease denotes Kaposi sarcoma
T6 914-940 SpecificDisease denotes T-cell large cell lymphoma
T7 1134-1162 Modifier denotes human immunodeficiency virus
T8 1198-1212 SpecificDisease denotes Kaposi sarcoma
T9 1288-1302 SpecificDisease denotes Kaposi sarcoma
T10 1426-1429 Modifier denotes HIV
T11 1540-1554 SpecificDisease denotes Kaposi sarcoma

NCBI-Disease-Corpus-Simple-All

Id Subject Object Predicate Lexical cue
T1 11-25 SpecificDisease denotes Kaposi sarcoma
T2 30-45 SpecificDisease denotes T-cell lymphoma
T3 68-92 SpecificDisease denotes Wiskott-Aldrich syndrome
T4 131-137 DiseaseClass denotes eczema
T5 170-186 DiseaseClass denotes thrombocytopenia
T6 207-237 SpecificDisease denotes Wiskott-Aldrich syndrome (WAS)
T7 327-343 DiseaseClass denotes thrombocytopenia
T8 730-733 SpecificDisease denotes WAS
T9 795-809 SpecificDisease denotes Kaposi sarcoma
T10 914-940 SpecificDisease denotes T-cell large cell lymphoma
T11 989-1007 SpecificDisease denotes Epstein-Barr virus
T12 1012-1027 SpecificDisease denotes cytomegalovirus
T13 1134-1168 SpecificDisease denotes human immunodeficiency virus (HIV)
T14 1198-1212 SpecificDisease denotes Kaposi sarcoma
T15 1288-1302 SpecificDisease denotes Kaposi sarcoma
T16 1426-1429 SpecificDisease denotes HIV
T17 1540-1554 SpecificDisease denotes Kaposi sarcoma