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PubMed:12746512 JSONTXT

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Oryza-OGER

Id Subject Object Predicate Lexical cue
T1 21-24 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T2 21-24 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T3 66-75 http://purl.obolibrary.org/obo/SO_0000119 denotes regulated
T4 90-103 http://purl.obolibrary.org/obo/SO_0001077 denotes transmembrane
T5 90-103 http://purl.obolibrary.org/obo/GO_0044214 denotes transmembrane
T6 90-103 http://purl.obolibrary.org/obo/GO_0016021 denotes transmembrane
T7 90-111 http://purl.obolibrary.org/obo/PR_000003230 denotes transmembrane protein
T8 104-111 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T9 104-111 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T10 104-111 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T11 104-111 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T12 104-111 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T13 104-111 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T14 124-131 http://id.nlm.nih.gov/mesh/D002523 denotes cereals
T15 132-135 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T16 132-135 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T17 136-147 http://id.nlm.nih.gov/mesh/D017360 denotes Arabidopsis
T18 149-153 http://purl.obolibrary.org/obo/PR_Q54NU3 denotes Cold
T19 149-165 http://purl.obolibrary.org/obo/GO_0009631 denotes Cold acclimation
T20 206-212 http://id.nlm.nih.gov/mesh/D010944 denotes plants
T21 262-265 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T22 262-265 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T23 344-348 http://purl.obolibrary.org/obo/PR_Q54NU3 denotes cold
T24 369-376 http://www.ncbi.nlm.nih.gov/taxonomy/32644 denotes unknown
T25 407-411 http://purl.obolibrary.org/obo/PR_Q54NU3 denotes cold
T26 423-428 http://purl.bioontology.org/ontology/RXNORM/901299 denotes wheat
T27 423-428 http://purl.bioontology.org/ontology/RXNORM/1441652 denotes wheat
T28 423-428 http://id.nlm.nih.gov/mesh/D014908 denotes wheat
T29 423-428 http://www.ncbi.nlm.nih.gov/taxonomy/4565 denotes wheat
T30 430-438 http://id.nlm.nih.gov/mesh/D014908 denotes Triticum
T31 430-447 http://id.nlm.nih.gov/mesh/D014908 denotes Triticum aestivum
T32 430-447 http://www.ncbi.nlm.nih.gov/taxonomy/4565 denotes Triticum aestivum
T33 485-488 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T34 485-488 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T35 597-600 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T36 597-600 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T37 665-668 http://web.expasy.org/cellosaurus/CVCL_Z424 denotes one
T38 665-668 http://purl.obolibrary.org/obo/CHEBI_58972 denotes one
T39 701-706 SDG725 denotes small
T40 764-777 http://purl.obolibrary.org/obo/SO_0001077 denotes transmembrane
T41 764-777 http://purl.obolibrary.org/obo/GO_0044214 denotes transmembrane
T42 764-777 http://purl.obolibrary.org/obo/GO_0016021 denotes transmembrane
T43 778-786 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T44 778-786 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T45 792-796 http://purl.obolibrary.org/obo/PR_Q54NU3 denotes cold
T46 797-806 http://purl.obolibrary.org/obo/SO_0000119 denotes regulated
T47 816-822 http://purl.obolibrary.org/obo/PR_000002327 denotes plasma
T48 816-822 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T49 816-831 http://purl.obolibrary.org/obo/GO_0005886 denotes plasma membrane
T50 823-831 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T51 823-831 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T52 823-831 http://purl.obolibrary.org/obo/UBERON_0000094 denotes membrane
T53 832-835 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T54 832-835 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T55 843-852 http://purl.obolibrary.org/obo/GO_0009579 denotes thylakoid
T56 843-861 http://purl.obolibrary.org/obo/GO_0042651 denotes thylakoid membrane
T57 853-861 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T58 853-861 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T59 853-861 http://purl.obolibrary.org/obo/UBERON_0000094 denotes membrane
T60 869-872 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T61 869-872 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T62 901-907 http://purl.obolibrary.org/obo/PR_000002327 denotes plasma
T63 901-907 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T64 901-916 http://purl.obolibrary.org/obo/GO_0005886 denotes plasma membrane
T65 908-916 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T66 908-916 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T67 908-916 http://purl.obolibrary.org/obo/UBERON_0000094 denotes membrane
T68 917-920 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T69 917-920 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T70 921-930 http://purl.obolibrary.org/obo/GO_0009579 denotes thylakoid
T71 921-939 http://purl.obolibrary.org/obo/GO_0042651 denotes thylakoid membrane
T72 931-939 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T73 931-939 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T74 931-939 http://purl.obolibrary.org/obo/UBERON_0000094 denotes membrane
T75 963-971 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T76 1014-1019 http://id.nlm.nih.gov/mesh/D010944 denotes plant
T77 1062-1071 http://purl.obolibrary.org/obo/SO_0000856 denotes conserved
T78 1072-1087 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T79 1072-1092 http://purl.obolibrary.org/obo/SO_0001811 denotes phosphorylation site
T80 1088-1092 http://purl.obolibrary.org/obo/SO_0000409 denotes site
T81 1088-1092 http://purl.obolibrary.org/obo/SO_0000839 denotes site
T82 1088-1092 http://purl.obolibrary.org/obo/SO_0000408 denotes site
T83 1093-1096 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T84 1093-1096 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T85 1099-1127 http://id.nlm.nih.gov/mesh/D017261 denotes glycosylphosphatidylinositol
T86 1099-1127 http://purl.obolibrary.org/obo/CHEBI_24410 denotes glycosylphosphatidylinositol
T87 1099-1127 http://id.nlm.nih.gov/mesh/D017261 denotes glycosylphosphatidylinositol
T88 1128-1137 http://purl.obolibrary.org/obo/GO_0043495 denotes anchoring
T89 1138-1142 http://purl.obolibrary.org/obo/SO_0000409 denotes site
T90 1138-1142 http://purl.obolibrary.org/obo/SO_0000839 denotes site
T91 1138-1142 http://purl.obolibrary.org/obo/SO_0000408 denotes site
T92 1161-1164 http://purl.obolibrary.org/obo/PR_P17813 denotes end
T93 1161-1164 http://purl.obolibrary.org/obo/PR_000001345 denotes end
T94 1169-1179 http://purl.obolibrary.org/obo/SO_0000857 denotes homologous
T95 1204-1209 http://www.ncbi.nlm.nih.gov/taxonomy/32644 denotes other
T96 1236-1240 http://purl.obolibrary.org/obo/PR_000024065 denotes this
T97 1236-1240 http://purl.obolibrary.org/obo/PR_O32583 denotes this
T98 1267-1272 http://id.nlm.nih.gov/mesh/D010944 denotes plant
T99 1295-1298 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T100 1295-1298 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T101 1324-1328 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T102 1324-1339 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T103 1379-1383 http://purl.obolibrary.org/obo/PR_000024065 denotes this
T104 1379-1383 http://purl.obolibrary.org/obo/PR_O32583 denotes this
T105 1384-1388 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T106 1419-1430 http://purl.obolibrary.org/obo/GO_0032502 denotes development
T107 1434-1452 http://purl.obolibrary.org/obo/GO_0033637 denotes freezing tolerance
T108 1434-1452 http://purl.obolibrary.org/obo/GO_0009409 denotes freezing tolerance
T109 1434-1452 http://purl.obolibrary.org/obo/GO_0009632 denotes freezing tolerance
T110 1456-1463 http://id.nlm.nih.gov/mesh/D002523 denotes cereals
T111 1464-1467 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T112 1464-1467 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T113 1468-1479 http://id.nlm.nih.gov/mesh/D017360 denotes Arabidopsis
T114 1524-1527 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T115 1524-1527 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T116 1528-1537 http://purl.obolibrary.org/obo/SO_0000119 denotes regulated
T117 1541-1546 http://purl.obolibrary.org/obo/CHEBI_15377 denotes water
T118 1541-1546 http://id.nlm.nih.gov/mesh/D014867 denotes water
T119 1541-1546 http://purl.bioontology.org/ontology/RXNORM/11295 denotes water
T120 1541-1546 http://id.nlm.nih.gov/mesh/D014867 denotes water
T121 1541-1553 http://id.nlm.nih.gov/mesh/D003681 denotes water stress
T122 1541-1553 http://id.nlm.nih.gov/mesh/D003681 denotes water stress
T123 1555-1560 http://purl.obolibrary.org/obo/CHEBI_30212 denotes light
T124 1555-1560 http://purl.obolibrary.org/obo/PR_Q9QYH9 denotes light
T125 1555-1560 http://purl.obolibrary.org/obo/PR_000002222 denotes light
T126 1555-1560 http://purl.obolibrary.org/obo/PR_O43557 denotes light
T127 1562-1565 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T128 1562-1565 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T129 1566-1579 http://purl.obolibrary.org/obo/CHEBI_28937 denotes abscisic acid
T130 1566-1579 http://purl.obolibrary.org/obo/CHEBI_22152 denotes abscisic acid
T131 1566-1579 ASR1 denotes abscisic acid
T132 1566-1579 http://purl.obolibrary.org/obo/CHEBI_2365 denotes abscisic acid
T133 1566-1579 http://purl.obolibrary.org/obo/CHEBI_62431 denotes abscisic acid
T134 1566-1579 ASR5 denotes abscisic acid
T135 1566-1579 http://id.nlm.nih.gov/mesh/D000040 denotes abscisic acid
T136 1566-1579 http://id.nlm.nih.gov/mesh/D000040 denotes abscisic acid
T137 1575-1579 http://purl.obolibrary.org/obo/CHEBI_37527 denotes acid
T138 1603-1606 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T139 1603-1606 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T140 1619-1625 http://purl.obolibrary.org/obo/SO_0001026 denotes genome
T141 1693-1702 http://www.uniprot.org/uniprot/Q38042 denotes G-protein
T142 1693-1702 http://www.uniprot.org/uniprot/P03644 denotes G-protein
T143 1693-1702 http://www.uniprot.org/uniprot/P03645 denotes G-protein
T144 1693-1702 http://www.uniprot.org/uniprot/P31281 denotes G-protein
T145 1693-1702 http://id.nlm.nih.gov/mesh/D019204 denotes G-protein
T146 1693-1702 http://www.uniprot.org/uniprot/P03643 denotes G-protein
T147 1693-1702 http://www.uniprot.org/uniprot/P07932 denotes G-protein
T148 1693-1720 http://id.nlm.nih.gov/mesh/D043562 denotes G-protein-coupled receptors
T149 1695-1702 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T150 1695-1702 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T151 1695-1702 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T152 1695-1702 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T153 1695-1702 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T154 1695-1702 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 701-706 http://identifiers.org/oryzabase.gene/11165 denotes small
T2 1566-1579 http://identifiers.org/oryzabase.gene/8408 denotes abscisic acid
T53778 701-706 http://identifiers.org/ricegap/LOC_Os02g34850 denotes small
T80090 1566-1579 http://identifiers.org/ricegap/LOC_Os11g06720 denotes abscisic acid
T3 1693-1720 http://identifiers.org/ricegap/LOC_Os06g09930 denotes G-protein-coupled receptors
T46022 701-706 http://identifiers.org/rapdb.locus/Os02g0554000 denotes small
T65079 1566-1579 http://identifiers.org/rapdb.locus/Os11g0167800 denotes abscisic acid
T88774 1693-1720 http://identifiers.org/rapdb.locus/Os06g0199800 denotes G-protein-coupled receptors
T78976 1566-1579 http://identifiers.org/uniprot/Q53JF7 denotes abscisic acid
M_0 423-428 hunflair:NA:Species denotes wheat
M_1 1566-1579 hunflair:NA:Chemical denotes abscisic acid
M_2 124-131 hunflair:NA:Species denotes cereals
M_3 1456-1463 hunflair:NA:Species denotes cereals
M_4 1693-1720 hunflair:NA:Gene denotes G-protein-coupled receptors
M_5 1099-1127 hunflair:NA:Chemical denotes glycosylphosphatidylinositol
M_6 1664-1676 hunflair:NA:Gene denotes cor413 genes
M_7 430-447 hunflair:NA:Species denotes Triticum aestivum
M_8 136-147 hunflair:NA:Species denotes Arabidopsis
M_9 1468-1479 hunflair:NA:Species denotes Arabidopsis

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 234-243 funRiceGene:214 denotes tolerance
M_1 1443-1452 funRiceGene:214 denotes tolerance
M_2 182-187 WTO:0000006 denotes trait
M_3 149-153 WTO:0000129, funRiceGene:509 denotes Cold
M_4 1419-1430 WTO:0000011, funRiceGene:359 denotes development
M_5 901-916 funRiceGene:329, xzyao:14501 denotes plasma membrane
M_6 1693-1720 hunflair:NA:Gene denotes G-protein-coupled receptors
M_7 1099-1127 hunflair:NA:Chemical denotes glycosylphosphatidylinositol
M_8 1566-1579 hunflair:NA:Chemical denotes abscisic acid
M_9 1664-1676 hunflair:NA:Gene denotes cor413 genes
M_10 136-147 hunflair:NA:Species denotes Arabidopsis
M_11 1468-1479 hunflair:NA:Species denotes Arabidopsis
M_12 124-131 hunflair:NA:Species denotes cereals
M_13 1456-1463 hunflair:NA:Species denotes cereals
M_14 430-447 hunflair:NA:Species denotes Triticum aestivum
M_15 423-428 hunflair:NA:Species denotes wheat
M_16 1566-1579 pubtator:MESH:D000040:Chemical denotes abscisic acid
M_17 430-447 pubtator:4565:Species denotes Triticum aestivum
M_18 136-147 pubtator:3702:Species denotes Arabidopsis
M_19 1468-1479 pubtator:3702:Species denotes Arabidopsis
M_20 1099-1127 pubtator:MESH:D017261:Chemical denotes glycosylphosphatidylinositol
M_21 423-428 pubtator:4565:Species denotes wheat
M_22 1150-1151 pubtator:MESH:D002244:Chemical denotes C

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 149-165 xzyao:41531 denotes Cold acclimation
M_1 1419-1430 WTO:0000011, funRiceGene:359 denotes development
M_2 344-365 xzyao:37154 denotes cold-responsive genes
M_3 266-281 xzyao:21075 denotes winter survival
M_4 816-831 funRiceGene:329, xzyao:23356 denotes plasma membrane
M_5 901-916 funRiceGene:329, xzyao:23356 denotes plasma membrane
M_6 1014-1027 xzyao:45052 denotes plant species
M_7 1541-1553 WTO:0000203, xzyao:42094 denotes water stress
M_8 701-713 xzyao:40239 denotes small family
M_9 300-314 xzyao:35638 denotes genetic nature
M_10 234-254 xzyao:20786 denotes tolerance mechanisms
M_11 430-447 xzyao:19370 denotes Triticum aestivum
M_12 149-153 WTO:0000129, funRiceGene:509 denotes Cold
M_13 344-348 WTO:0000129, funRiceGene:509 denotes cold
M_14 407-411 WTO:0000129, funRiceGene:509 denotes cold
M_15 792-796 WTO:0000129, funRiceGene:509 denotes cold
M_16 369-385 xzyao:10045 denotes unknown function
M_17 1566-1579 funRiceGene:339, xzyao:16388 denotes abscisic acid
M_18 59-65 funRiceGene:361 denotes stress
M_19 1547-1553 funRiceGene:361 denotes stress
M_20 182-187 WTO:0000006 denotes trait
M_21 1004-1027 xzyao:6093 denotes different plant species
M_22 1072-1092 xzyao:28703 denotes phosphorylation site
M_23 843-861 xzyao:13514 denotes thylakoid membrane
M_24 921-939 xzyao:13514 denotes thylakoid membrane
M_25 1434-1452 xzyao:7910 denotes freezing tolerance
M_26 234-243 funRiceGene:214 denotes tolerance
M_27 1443-1452 funRiceGene:214 denotes tolerance
M_28 1581-1602 xzyao:3169 denotes Structure predictions
M_29 430-447 hunflair:NA:Species denotes Triticum aestivum
M_30 136-147 hunflair:NA:Species denotes Arabidopsis
M_31 1468-1479 hunflair:NA:Species denotes Arabidopsis
M_32 1099-1127 hunflair:NA:Chemical denotes glycosylphosphatidylinositol
M_33 1693-1720 hunflair:NA:Gene denotes G-protein-coupled receptors
M_34 1566-1579 hunflair:NA:Chemical denotes abscisic acid
M_35 1664-1676 hunflair:NA:Gene denotes cor413 genes
M_36 124-131 hunflair:NA:Species denotes cereals
M_37 1456-1463 hunflair:NA:Species denotes cereals
M_38 423-428 hunflair:NA:Species denotes wheat
M_39 1566-1579 pubtator:MESH:D000040:Chemical denotes abscisic acid
M_40 423-428 pubtator:4565:Species denotes wheat
M_41 136-147 pubtator:3702:Species denotes Arabidopsis
M_42 1468-1479 pubtator:3702:Species denotes Arabidopsis
M_43 1150-1151 pubtator:MESH:D002244:Chemical denotes C
M_44 430-447 pubtator:4565:Species denotes Triticum aestivum
M_45 1099-1127 pubtator:MESH:D017261:Chemical denotes glycosylphosphatidylinositol

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 423-428 hunflair:NA:Species denotes wheat
M_1 1566-1579 hunflair:NA:Chemical denotes abscisic acid
M_2 124-131 hunflair:NA:Species denotes cereals
M_3 1456-1463 hunflair:NA:Species denotes cereals
M_4 1693-1720 hunflair:NA:Gene denotes G-protein-coupled receptors
M_5 1099-1127 hunflair:NA:Chemical denotes glycosylphosphatidylinositol
M_6 1664-1676 hunflair:NA:Gene denotes cor413 genes
M_7 430-447 hunflair:NA:Species denotes Triticum aestivum
M_8 136-147 hunflair:NA:Species denotes Arabidopsis
M_9 1468-1479 hunflair:NA:Species denotes Arabidopsis

funRiceGenes-all

Id Subject Object Predicate Lexical cue
PTO-all_T1 1161-1164 http://purl.obolibrary.org/obo/TO_0000587 denotes end