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PubMed:12626414 / 239-440 JSONTXT

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GlyCosmos600-CLO

Id Subject Object Predicate Lexical cue
T1 129-146 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells

GlyCosmos600-GlycoGenes2

Id Subject Object Predicate Lexical cue
T3 14-25 https://acgg.asia/db/ggdb/info/gg034 denotes GlcNAc6ST-2
T4 44-57 https://acgg.asia/db/ggdb/info/gg034 denotes HEC-GlcNAc6ST
T5 61-65 https://acgg.asia/db/ggdb/info/gg034 denotes LSST

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T3 0-201 Sentence denotes One of these, GlcNAc6ST-2 (originally named HEC-GlcNAc6ST or LSST), shows a very restricted expression at the mRNA level in high endothelial cells (HECs) of lymph nodes high endothelial venules (HEVs).
T3 0-201 Sentence denotes One of these, GlcNAc6ST-2 (originally named HEC-GlcNAc6ST or LSST), shows a very restricted expression at the mRNA level in high endothelial cells (HECs) of lymph nodes high endothelial venules (HEVs).

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 157-168 http://purl.obolibrary.org/obo/MAT_0000197 denotes lymph nodes
T2 157-168 http://purl.obolibrary.org/obo/MAT_0000442 denotes lymph nodes
T3 157-162 http://purl.obolibrary.org/obo/MAT_0000055 denotes lymph

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T18 174-193 FMAID:62117 denotes endothelial venules
_T3 129-140 FMAID:63916 denotes endothelial
_T4 129-140 FMAID:162384 denotes endothelial
_T5 129-146 FMAID:169653 denotes endothelial cells
_T6 129-146 FMAID:66772 denotes endothelial cells
_T7 129-146 FMAID:69075 denotes endothelial cells
_T8 129-146 FMAID:164926 denotes endothelial cells
_T9 141-146 FMAID:68646 denotes cells
_T10 141-146 FMAID:169002 denotes cells
_T11 154-168 FMAID:171664 denotes of lymph nodes
_T12 157-162 FMAID:97585 denotes lymph
_T13 157-162 FMAID:217076 denotes lymph
_T14 157-168 FMAID:91368 denotes lymph nodes
_T15 157-168 FMAID:5034 denotes lymph nodes
_T16 174-185 FMAID:63916 denotes endothelial
_T17 174-185 FMAID:162384 denotes endothelial
_T19 174-193 FMAID:67762 denotes endothelial venules
_T20 174-193 FMAID:166404 denotes endothelial venules
_T21 174-193 FMAID:166393 denotes endothelial venules
_T22 186-193 FMAID:167505 denotes venules
_T23 186-193 FMAID:63130 denotes venules

uniprot-human

Id Subject Object Predicate Lexical cue
T7 14-25 http://www.uniprot.org/uniprot/Q8NCG5 denotes GlcNAc6ST-2
T9 44-57 http://www.uniprot.org/uniprot/Q8NCG5 denotes HEC-GlcNAc6ST
T10 61-65 http://www.uniprot.org/uniprot/Q8NCG5 denotes LSST
T11 44-47 http://www.uniprot.org/uniprot/O14777 denotes HEC
T12 169-193 http://www.uniprot.org/uniprot/Q14515 denotes high endothelial venules

uniprot-mouse

Id Subject Object Predicate Lexical cue
T7 14-25 http://www.uniprot.org/uniprot/Q9R1I1 denotes GlcNAc6ST-2
T9 44-57 http://www.uniprot.org/uniprot/Q9R1I1 denotes HEC-GlcNAc6ST
T10 61-65 http://www.uniprot.org/uniprot/Q9R1I1 denotes LSST

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T3 141-146 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-CC

Id Subject Object Predicate Lexical cue
T1 141-146 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 157-162 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
T3 157-168 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph nodes
T5 186-193 http://purl.obolibrary.org/obo/UBERON_0001979 denotes venules

EDAM-DFO

Id Subject Object Predicate Lexical cue
T2 38-43 http://edamontology.org/data_2099 denotes named

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 157-162 http://purl.obolibrary.org/obo/MAT_0000055 denotes lymph
T2 157-168 http://purl.obolibrary.org/obo/MAT_0000197 denotes lymph nodes
T3 157-168 http://purl.obolibrary.org/obo/MAT_0000442 denotes lymph nodes

pubmed-enju-pas

Id Subject Object Predicate Lexical cue
EnjuParser_T33 0-3 CD denotes One
EnjuParser_T34 4-6 IN denotes of
EnjuParser_T35 7-12 DT denotes these
EnjuParser_T36 12-13 -COMMA- denotes ,
EnjuParser_T37 14-25 NN denotes GlcNAc6ST-2
EnjuParser_T38 26-27 -LRB- denotes (
EnjuParser_T39 27-37 RB denotes originally
EnjuParser_T40 38-43 VBN denotes named
EnjuParser_T41 44-57 NN denotes HEC-GlcNAc6ST
EnjuParser_T42 58-60 CC denotes or
EnjuParser_T43 61-65 NN denotes LSST
EnjuParser_T44 65-66 -RRB- denotes )
EnjuParser_T45 66-67 -COMMA- denotes ,
EnjuParser_T46 68-73 VBZ denotes shows
EnjuParser_T47 74-75 DT denotes a
EnjuParser_T48 76-80 RB denotes very
EnjuParser_T49 81-91 JJ denotes restricted
EnjuParser_T50 92-102 NN denotes expression
EnjuParser_T51 103-105 IN denotes at
EnjuParser_T52 106-109 DT denotes the
EnjuParser_T53 110-114 NN denotes mRNA
EnjuParser_T54 115-120 NN denotes level
EnjuParser_T55 121-123 IN denotes in
EnjuParser_T56 124-128 JJ denotes high
EnjuParser_T57 129-140 JJ denotes endothelial
EnjuParser_T58 141-146 NNS denotes cells
EnjuParser_T59 147-148 -LRB- denotes (
EnjuParser_T60 148-152 NNS denotes HECs
EnjuParser_T61 152-153 -RRB- denotes )
EnjuParser_T62 154-156 IN denotes of
EnjuParser_T63 157-162 NN denotes lymph
EnjuParser_T64 163-168 NNS denotes nodes
EnjuParser_T65 169-173 JJ denotes high
EnjuParser_T66 174-185 JJ denotes endothelial
EnjuParser_T67 186-193 NNS denotes venules
EnjuParser_T68 194-195 -LRB- denotes (
EnjuParser_T69 195-199 NNS denotes HEVs
EnjuParser_T70 199-200 -RRB- denotes )
EnjuParser_R33 EnjuParser_T33 EnjuParser_T34 arg1Of One,of
EnjuParser_R34 EnjuParser_T35 EnjuParser_T34 arg2Of these,of
EnjuParser_R35 EnjuParser_T33 EnjuParser_T36 arg1Of One,","
EnjuParser_R36 EnjuParser_T37 EnjuParser_T36 arg2Of GlcNAc6ST-2,","
EnjuParser_R37 EnjuParser_T37 EnjuParser_T38 arg1Of GlcNAc6ST-2,(
EnjuParser_R38 EnjuParser_T40 EnjuParser_T38 arg2Of named,(
EnjuParser_R39 EnjuParser_T44 EnjuParser_T38 arg3Of ),(
EnjuParser_R40 EnjuParser_T40 EnjuParser_T39 arg1Of named,originally
EnjuParser_R41 EnjuParser_T42 EnjuParser_T40 arg3Of or,named
EnjuParser_R42 EnjuParser_T41 EnjuParser_T42 arg1Of HEC-GlcNAc6ST,or
EnjuParser_R43 EnjuParser_T43 EnjuParser_T42 arg2Of LSST,or
EnjuParser_R44 EnjuParser_T46 EnjuParser_T45 arg1Of shows,","
EnjuParser_R45 EnjuParser_T33 EnjuParser_T46 arg1Of One,shows
EnjuParser_R46 EnjuParser_T50 EnjuParser_T46 arg2Of expression,shows
EnjuParser_R47 EnjuParser_T50 EnjuParser_T47 arg1Of expression,a
EnjuParser_R48 EnjuParser_T49 EnjuParser_T48 arg1Of restricted,very
EnjuParser_R49 EnjuParser_T50 EnjuParser_T49 arg1Of expression,restricted
EnjuParser_R50 EnjuParser_T50 EnjuParser_T51 arg1Of expression,at
EnjuParser_R51 EnjuParser_T54 EnjuParser_T51 arg2Of level,at
EnjuParser_R52 EnjuParser_T54 EnjuParser_T52 arg1Of level,the
EnjuParser_R53 EnjuParser_T54 EnjuParser_T53 arg1Of level,mRNA
EnjuParser_R54 EnjuParser_T50 EnjuParser_T55 arg1Of expression,in
EnjuParser_R55 EnjuParser_T58 EnjuParser_T55 arg2Of cells,in
EnjuParser_R56 EnjuParser_T58 EnjuParser_T56 arg1Of cells,high
EnjuParser_R57 EnjuParser_T58 EnjuParser_T57 arg1Of cells,endothelial
EnjuParser_R58 EnjuParser_T58 EnjuParser_T59 arg1Of cells,(
EnjuParser_R59 EnjuParser_T60 EnjuParser_T59 arg2Of HECs,(
EnjuParser_R60 EnjuParser_T61 EnjuParser_T59 arg3Of ),(
EnjuParser_R61 EnjuParser_T50 EnjuParser_T62 arg1Of expression,of
EnjuParser_R62 EnjuParser_T67 EnjuParser_T62 arg2Of venules,of
EnjuParser_R63 EnjuParser_T67 EnjuParser_T63 arg1Of venules,lymph
EnjuParser_R64 EnjuParser_T67 EnjuParser_T64 arg1Of venules,nodes
EnjuParser_R65 EnjuParser_T67 EnjuParser_T65 arg1Of venules,high
EnjuParser_R66 EnjuParser_T67 EnjuParser_T66 arg1Of venules,endothelial
EnjuParser_R67 EnjuParser_T67 EnjuParser_T68 arg1Of venules,(
EnjuParser_R68 EnjuParser_T69 EnjuParser_T68 arg2Of HEVs,(
EnjuParser_R69 EnjuParser_T70 EnjuParser_T68 arg3Of ),(

GlyCosmos600-MAT

Id Subject Object Predicate Lexical cue
PD-MAT-B_T2 157-162 http://purl.obolibrary.org/obo/MAT_0000055 denotes lymph
PD-MAT-B_T4 157-168 http://purl.obolibrary.org/obo/MAT_0000197 denotes lymph nodes
PD-MAT-B_T6 157-168 http://purl.obolibrary.org/obo/MAT_0000442 denotes lymph nodes

GlyCosmos600-GlycoProteins

Id Subject Object Predicate Lexical cue
PD-GlycoProteins-B_T17 110-114 https://acgg.asia/db/gpdb/id/GPDB0005542 denotes mRNA
PD-GlycoProteins-B_T18 110-114 https://acgg.asia/db/gpdb/id/GPDB0005543 denotes mRNA
PD-GlycoProteins-B_T19 110-114 https://acgg.asia/db/gpdb/id/GPDB0005544 denotes mRNA
PD-GlycoProteins-B_T20 110-114 https://acgg.asia/db/gpdb/id/GPDB0005545 denotes mRNA

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T3 157-162 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
PD-UBERON-AE-B_T5 157-168 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph nodes
PD-UBERON-AE-B_T7 186-193 http://purl.obolibrary.org/obo/UBERON_0001979 denotes venules

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 157-168 Body_part denotes lymph nodes http://purl.obolibrary.org/obo/MAT_0000197|http://purl.obolibrary.org/obo/MAT_0000442

GlyCosmos600-FMA

Id Subject Object Predicate Lexical cue fma_id
T2 110-114 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T3 129-146 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T4 141-146 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T5 157-168 Body_part denotes lymph nodes http://purl.org/sig/ont/fma/fma5034
T6 157-162 Body_part denotes lymph http://purl.org/sig/ont/fma/fma9671
T7 186-193 Body_part denotes venules http://purl.org/sig/ont/fma/fma63130

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 129-146 Body_part denotes endothelial cells http://purl.obolibrary.org/obo/CL_0000115
T2 157-193 Body_part denotes lymph nodes high endothelial venules http://purl.obolibrary.org/obo/UBERON_8410038
T3 195-199 Body_part denotes HEVs http://purl.obolibrary.org/obo/UBERON_8410037

Glycosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 129-146 Cell denotes endothelial cells http://purl.obolibrary.org/obo/CL:0000115