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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-128 Sentence denotes Characterization by NMR and molecular modeling of the binding of polyisoprenols and polyisoprenyl recognition sequence peptides:
TextSentencer_T2 129-198 Sentence denotes 3D structure of the complexes reveals sites of specific interactions.
TextSentencer_T3 199-498 Sentence denotes The objective of these studies was to test the hypothesis that proteins that contain potential polyisoprenyl recognition sequences (PIRSs) in their transmembrane-spanning domain can bind to the polyisoprenyl (PI) glycosyl carrier lipids undecaprenyl phosphate (C55-P) and dolichyl phosphate (C95-P).
TextSentencer_T4 499-656 Sentence denotes A number of prokaryotic and eukaryotic glycosyltransferases that utilize PI coenzymes contain a conserved PIRS postulated to be the active PI binding domain.
TextSentencer_T5 657-809 Sentence denotes To study this problem, we first determined the 3D structure of a PIRS peptide, NeuE, by homonuclear 2D 1H-nuclear magnetic resonance (NMR) spectroscopy.
TextSentencer_T6 810-1043 Sentence denotes Experimentally generated distance constraints derived from nuclear Overhauser enhancement and torsion angle constraints derived from coupling constants were used for restrained molecular dynamics and energy minimization calculations.
TextSentencer_T7 1044-1171 Sentence denotes Molecular models of the NeuE peptide were built based on calculations of energy minimization using the DGII program NMRchitect.
TextSentencer_T8 1172-1437 Sentence denotes 3D models of dolichol (C95) and C95-P were built based on our 2D 1H-NMR nuclear Overhauser enhancement spectroscopy (NOESY) results and refined by energy minimization with respect to all atoms using the AMBER (assisted modeling with energy refinements) force field.
TextSentencer_T9 1438-1619 Sentence denotes Our energy minimization studies were carried out on a conformational model of dolichol that was originally derived from small-angle X-ray scattering and molecular mechanics methods.
TextSentencer_T10 1620-1781 Sentence denotes These results revealed that the PIs are conformationally nearly identical tripartite molecules, with their three domains arranged in a coiled, helical structure.
TextSentencer_T11 1782-2050 Sentence denotes Analyses of the intermolecular cross-peaks in the 2D NOESY spectra of PIRS peptides in the presence of PIs confirmed a highly specific interaction and identified key contact amino acids in the NeuE peptide that constituted a binding motif for interacting with the PIs.
TextSentencer_T12 2051-2176 Sentence denotes These studies also showed that subtle conformational changes occurred within both the PIs and the NeuE peptide after binding.
TextSentencer_T13 2177-2288 Sentence denotes 3D structures of the resulting molecular complexes revealed that each PI could bind more than one PIRS peptide.
TextSentencer_T14 2289-2504 Sentence denotes These studies thus represent the first evidence for a direct physical interaction between specific contact amino acids in the PIRS peptides and the PIs and supports the hypothesis of a bifunctional role for the PIs.
TextSentencer_T15 2505-2759 Sentence denotes The central idea is that these superlipids may serve as a structural scaffold to organize and stabilize in functional domains PIRS-containing proteins within multiglycosyltransferase complexes that participate in biosynthetic and translocation processes.
T1 0-128 Sentence denotes Characterization by NMR and molecular modeling of the binding of polyisoprenols and polyisoprenyl recognition sequence peptides:
T2 129-198 Sentence denotes 3D structure of the complexes reveals sites of specific interactions.
T3 199-498 Sentence denotes The objective of these studies was to test the hypothesis that proteins that contain potential polyisoprenyl recognition sequences (PIRSs) in their transmembrane-spanning domain can bind to the polyisoprenyl (PI) glycosyl carrier lipids undecaprenyl phosphate (C55-P) and dolichyl phosphate (C95-P).
T4 499-656 Sentence denotes A number of prokaryotic and eukaryotic glycosyltransferases that utilize PI coenzymes contain a conserved PIRS postulated to be the active PI binding domain.
T5 657-809 Sentence denotes To study this problem, we first determined the 3D structure of a PIRS peptide, NeuE, by homonuclear 2D 1H-nuclear magnetic resonance (NMR) spectroscopy.
T6 810-1043 Sentence denotes Experimentally generated distance constraints derived from nuclear Overhauser enhancement and torsion angle constraints derived from coupling constants were used for restrained molecular dynamics and energy minimization calculations.
T7 1044-1171 Sentence denotes Molecular models of the NeuE peptide were built based on calculations of energy minimization using the DGII program NMRchitect.
T8 1172-1437 Sentence denotes 3D models of dolichol (C95) and C95-P were built based on our 2D 1H-NMR nuclear Overhauser enhancement spectroscopy (NOESY) results and refined by energy minimization with respect to all atoms using the AMBER (assisted modeling with energy refinements) force field.
T9 1438-1619 Sentence denotes Our energy minimization studies were carried out on a conformational model of dolichol that was originally derived from small-angle X-ray scattering and molecular mechanics methods.
T10 1620-1781 Sentence denotes These results revealed that the PIs are conformationally nearly identical tripartite molecules, with their three domains arranged in a coiled, helical structure.
T11 1782-2050 Sentence denotes Analyses of the intermolecular cross-peaks in the 2D NOESY spectra of PIRS peptides in the presence of PIs confirmed a highly specific interaction and identified key contact amino acids in the NeuE peptide that constituted a binding motif for interacting with the PIs.
T12 2051-2176 Sentence denotes These studies also showed that subtle conformational changes occurred within both the PIs and the NeuE peptide after binding.
T13 2177-2288 Sentence denotes 3D structures of the resulting molecular complexes revealed that each PI could bind more than one PIRS peptide.
T14 2289-2504 Sentence denotes These studies thus represent the first evidence for a direct physical interaction between specific contact amino acids in the PIRS peptides and the PIs and supports the hypothesis of a bifunctional role for the PIs.
T15 2505-2759 Sentence denotes The central idea is that these superlipids may serve as a structural scaffold to organize and stabilize in functional domains PIRS-containing proteins within multiglycosyltransferase complexes that participate in biosynthetic and translocation processes.
T1 0-128 Sentence denotes Characterization by NMR and molecular modeling of the binding of polyisoprenols and polyisoprenyl recognition sequence peptides:
T2 129-198 Sentence denotes 3D structure of the complexes reveals sites of specific interactions.
T3 199-498 Sentence denotes The objective of these studies was to test the hypothesis that proteins that contain potential polyisoprenyl recognition sequences (PIRSs) in their transmembrane-spanning domain can bind to the polyisoprenyl (PI) glycosyl carrier lipids undecaprenyl phosphate (C55-P) and dolichyl phosphate (C95-P).
T4 499-656 Sentence denotes A number of prokaryotic and eukaryotic glycosyltransferases that utilize PI coenzymes contain a conserved PIRS postulated to be the active PI binding domain.
T5 657-809 Sentence denotes To study this problem, we first determined the 3D structure of a PIRS peptide, NeuE, by homonuclear 2D 1H-nuclear magnetic resonance (NMR) spectroscopy.
T6 810-1043 Sentence denotes Experimentally generated distance constraints derived from nuclear Overhauser enhancement and torsion angle constraints derived from coupling constants were used for restrained molecular dynamics and energy minimization calculations.
T7 1044-1171 Sentence denotes Molecular models of the NeuE peptide were built based on calculations of energy minimization using the DGII program NMRchitect.
T8 1172-1437 Sentence denotes 3D models of dolichol (C95) and C95-P were built based on our 2D 1H-NMR nuclear Overhauser enhancement spectroscopy (NOESY) results and refined by energy minimization with respect to all atoms using the AMBER (assisted modeling with energy refinements) force field.
T9 1438-1619 Sentence denotes Our energy minimization studies were carried out on a conformational model of dolichol that was originally derived from small-angle X-ray scattering and molecular mechanics methods.
T10 1620-1781 Sentence denotes These results revealed that the PIs are conformationally nearly identical tripartite molecules, with their three domains arranged in a coiled, helical structure.
T11 1782-2050 Sentence denotes Analyses of the intermolecular cross-peaks in the 2D NOESY spectra of PIRS peptides in the presence of PIs confirmed a highly specific interaction and identified key contact amino acids in the NeuE peptide that constituted a binding motif for interacting with the PIs.
T12 2051-2176 Sentence denotes These studies also showed that subtle conformational changes occurred within both the PIs and the NeuE peptide after binding.
T13 2177-2288 Sentence denotes 3D structures of the resulting molecular complexes revealed that each PI could bind more than one PIRS peptide.
T14 2289-2504 Sentence denotes These studies thus represent the first evidence for a direct physical interaction between specific contact amino acids in the PIRS peptides and the PIs and supports the hypothesis of a bifunctional role for the PIs.
T15 2505-2759 Sentence denotes The central idea is that these superlipids may serve as a structural scaffold to organize and stabilize in functional domains PIRS-containing proteins within multiglycosyltransferase complexes that participate in biosynthetic and translocation processes.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 511-522 http://purl.obolibrary.org/obo/MAT_0000190 denotes prokaryotic

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T3 262-270 FMAID:67257 denotes proteins
_T1 237-241 FMAID:178661 denotes test
_T2 262-270 FMAID:165447 denotes proteins
_T4 408-410 FMAID:214745 denotes PI
_T5 429-435 FMAID:67264 denotes lipids
_T6 429-435 FMAID:165448 denotes lipids
_T7 572-574 FMAID:214745 denotes PI
_T8 638-640 FMAID:214745 denotes PI
_T9 1652-1655 FMAID:214745 denotes PIs
_T10 1798-1812 FMAID:202234 denotes intermolecular
_T11 1798-1812 FMAID:85706 denotes intermolecular
_T12 1885-1888 FMAID:214745 denotes PIs
_T13 1956-1967 FMAID:82739 denotes amino acids
_T14 1956-1967 FMAID:196728 denotes amino acids
_T15 2046-2049 FMAID:214745 denotes PIs
_T16 2137-2140 FMAID:214745 denotes PIs
_T17 2247-2249 FMAID:214745 denotes PI
_T18 2396-2407 FMAID:82739 denotes amino acids
_T19 2396-2407 FMAID:196728 denotes amino acids
_T20 2437-2440 FMAID:214745 denotes PIs
_T21 2500-2503 FMAID:214745 denotes PIs
_T22 2509-2516 FMAID:242678 denotes central
_T23 2509-2516 FMAID:30328 denotes central
_T24 2509-2516 FMAID:174816 denotes central
_T25 2586-2594 FMAID:67498 denotes organize
_T26 2586-2594 FMAID:166081 denotes organize
_T27 2647-2655 FMAID:67257 denotes proteins
_T28 2647-2655 FMAID:165447 denotes proteins

uniprot-human

Id Subject Object Predicate Lexical cue
T1 408-410 http://www.uniprot.org/uniprot/Q86U18 denotes PI
T2 572-574 http://www.uniprot.org/uniprot/Q86U18 denotes PI
T3 638-640 http://www.uniprot.org/uniprot/Q86U18 denotes PI
T4 2247-2249 http://www.uniprot.org/uniprot/Q86U18 denotes PI
T5 408-410 http://www.uniprot.org/uniprot/P01298 denotes PI
T6 572-574 http://www.uniprot.org/uniprot/P01298 denotes PI
T7 638-640 http://www.uniprot.org/uniprot/P01298 denotes PI
T8 2247-2249 http://www.uniprot.org/uniprot/P01298 denotes PI

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 1755-1761 http://www.uniprot.org/uniprot/Q5SU73 denotes coiled

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 527-537 http://purl.bioontology.org/ontology/NCBITAXON/2759 denotes eukaryotic
T2 1601-1610 http://purl.bioontology.org/ontology/NCBITAXON/127244 denotes mechanics
T3 1763-1770 http://purl.bioontology.org/ontology/NCBITAXON/53324 denotes helical

GO-BP

Id Subject Object Predicate Lexical cue
T1 412-420 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosyl

GO-MF

Id Subject Object Predicate Lexical cue
T1 54-61 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T2 641-648 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 2007-2014 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 381-385 http://purl.obolibrary.org/obo/GO_0070026 denotes bind
T5 2256-2260 http://purl.obolibrary.org/obo/GO_0070026 denotes bind
T6 54-61 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T7 641-648 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T8 2007-2014 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T9 381-385 http://purl.obolibrary.org/obo/GO_0003680 denotes bind
T10 2256-2260 http://purl.obolibrary.org/obo/GO_0003680 denotes bind
T11 54-61 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T12 641-648 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T13 2007-2014 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T14 381-385 http://purl.obolibrary.org/obo/GO_0017091 denotes bind
T15 2256-2260 http://purl.obolibrary.org/obo/GO_0017091 denotes bind
T16 54-61 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T17 641-648 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T18 2007-2014 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T19 381-385 http://purl.obolibrary.org/obo/GO_0005488 denotes bind
T20 2256-2260 http://purl.obolibrary.org/obo/GO_0005488 denotes bind

GO-CC

Id Subject Object Predicate Lexical cue
T1 347-360 http://purl.obolibrary.org/obo/GO_0016021 denotes transmembrane
T2 347-360 http://purl.obolibrary.org/obo/GO_0044214 denotes transmembrane

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 2509-2516 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central
T2 2586-2594 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organize

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 20-23 http://edamontology.org/topic_0593 denotes NMR
T2 28-46 http://edamontology.org/topic_2275 denotes molecular modeling
T3 110-118 http://edamontology.org/topic_3168 denotes sequence
T4 110-118 http://edamontology.org/topic_0080 denotes sequence
T5 119-127 http://edamontology.org/topic_0154 denotes peptides
T6 185-197 http://edamontology.org/topic_0602 denotes interactions
T7 222-229 http://edamontology.org/topic_3678 denotes studies
T8 262-270 http://edamontology.org/topic_0078 denotes proteins
T9 320-329 http://edamontology.org/topic_3168 denotes sequences
T10 320-329 http://edamontology.org/topic_0080 denotes sequences
T11 429-435 http://edamontology.org/topic_0153 denotes lipids
T12 511-537 http://edamontology.org/topic_1811 denotes prokaryotic and eukaryotic
T13 527-537 http://edamontology.org/topic_2818 denotes eukaryotic
T14 660-665 http://edamontology.org/topic_3678 denotes study
T15 727-734 http://edamontology.org/topic_0154 denotes peptide
T16 763-789 http://edamontology.org/topic_3444 denotes nuclear magnetic resonance
T17 791-794 http://edamontology.org/topic_0593 denotes NMR
T18 791-808 http://edamontology.org/topic_0593 denotes NMR) spectroscopy
T19 796-808 http://edamontology.org/topic_0593 denotes spectroscopy
T20 987-1005 http://edamontology.org/topic_0176 denotes molecular dynamics
T21 1044-1060 http://edamontology.org/topic_2275 denotes Molecular models
T22 1073-1080 http://edamontology.org/topic_0154 denotes peptide
T23 1240-1243 http://edamontology.org/topic_0593 denotes NMR
T24 1244-1287 http://edamontology.org/topic_0593 denotes nuclear Overhauser enhancement spectroscopy
T25 1275-1287 http://edamontology.org/topic_0593 denotes spectroscopy
T26 1289-1294 http://edamontology.org/topic_0593 denotes NOESY
T27 1462-1469 http://edamontology.org/topic_3678 denotes studies
T28 1705-1714 http://edamontology.org/topic_2839 denotes molecules
T29 1835-1840 http://edamontology.org/topic_0593 denotes NOESY
T30 1857-1865 http://edamontology.org/topic_0154 denotes peptides
T31 1917-1928 http://edamontology.org/topic_0602 denotes interaction
T32 1956-1967 http://edamontology.org/topic_0154 denotes amino acids
T33 1980-1987 http://edamontology.org/topic_0154 denotes peptide
T34 2015-2020 http://edamontology.org/topic_0158 denotes motif
T35 2025-2036 http://edamontology.org/topic_0602 denotes interacting
T36 2057-2064 http://edamontology.org/topic_3678 denotes studies
T37 2154-2161 http://edamontology.org/topic_0154 denotes peptide
T38 2280-2287 http://edamontology.org/topic_0154 denotes peptide
T39 2295-2302 http://edamontology.org/topic_3678 denotes studies
T40 2350-2358 http://edamontology.org/topic_3318 denotes physical
T41 2359-2370 http://edamontology.org/topic_0602 denotes interaction
T42 2396-2407 http://edamontology.org/topic_0154 denotes amino acids
T43 2420-2428 http://edamontology.org/topic_0154 denotes peptides
T44 2647-2655 http://edamontology.org/topic_0078 denotes proteins

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 28-46 http://edamontology.org/operation_0322 denotes molecular modeling
T2 98-109 http://edamontology.org/operation_2423 denotes recognition
T3 110-118 http://edamontology.org/data_2044 denotes sequence
T4 110-118 http://edamontology.org/operation_3218 denotes sequence
T5 119-127 http://edamontology.org/data_2906 denotes peptides
T6 132-141 http://edamontology.org/data_0883 denotes structure
T7 262-270 http://edamontology.org/format_1208 denotes proteins
T8 262-270 http://edamontology.org/data_1467 denotes proteins
T9 308-319 http://edamontology.org/operation_2423 denotes recognition
T10 320-329 http://edamontology.org/data_2044 denotes sequences
T11 320-329 http://edamontology.org/operation_3218 denotes sequences
T12 707-716 http://edamontology.org/data_0883 denotes structure
T13 727-734 http://edamontology.org/data_2906 denotes peptide
T14 825-834 http://edamontology.org/operation_3429 denotes generated
T15 987-1005 http://edamontology.org/operation_2476 denotes molecular dynamics
T16 1030-1042 http://edamontology.org/operation_3438 denotes calculations
T17 1044-1060 http://edamontology.org/operation_0322 denotes Molecular models
T18 1073-1080 http://edamontology.org/data_2906 denotes peptide
T19 1101-1113 http://edamontology.org/operation_3438 denotes calculations
T20 1771-1780 http://edamontology.org/data_0883 denotes structure
T21 1841-1848 http://edamontology.org/data_3483 denotes spectra
T22 1857-1865 http://edamontology.org/data_2906 denotes peptides
T23 1929-1943 http://edamontology.org/data_0992 denotes and identified
T24 1933-1943 http://edamontology.org/data_0842 denotes identified
T25 1933-1943 http://edamontology.org/data_2611 denotes identified
T26 1956-1970 http://edamontology.org/data_1501 denotes amino acids in
T27 1980-1987 http://edamontology.org/data_2906 denotes peptide
T28 2154-2161 http://edamontology.org/data_2906 denotes peptide
T29 2180-2190 http://edamontology.org/data_0883 denotes structures
T30 2280-2287 http://edamontology.org/data_2906 denotes peptide
T31 2396-2410 http://edamontology.org/data_1501 denotes amino acids in
T32 2420-2428 http://edamontology.org/data_2906 denotes peptides
T33 2563-2573 http://edamontology.org/data_0883 denotes structural
T34 2574-2582 http://edamontology.org/operation_3216 denotes scaffold
T35 2647-2655 http://edamontology.org/data_1467 denotes proteins
T36 2647-2655 http://edamontology.org/format_1208 denotes proteins
T37 2749-2758 http://edamontology.org/operation_0004 denotes processes
T38 2749-2758 http://edamontology.org/operation_2409 denotes processes

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 511-522 http://purl.obolibrary.org/obo/MAT_0000190 denotes prokaryotic

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 1355-1358 "http://rdf.glycoinfo.org/glycan/G41652MJ" denotes all
GlycanIUPAC_T2 1355-1358 "http://rdf.glycoinfo.org/glycan/G20761YC" denotes all
GlycanIUPAC_T3 1355-1358 "http://rdf.glycoinfo.org/glycan/G19807HM" denotes all
GlycanIUPAC_T4 1355-1358 "http://rdf.glycoinfo.org/glycan/G20351TE" denotes all
GlycanIUPAC_T5 1355-1358 "http://rdf.glycoinfo.org/glycan/G71957MR" denotes all
GlycanIUPAC_T6 1355-1358 "http://rdf.glycoinfo.org/glycan/G59040AE" denotes all
GlycanIUPAC_T7 1355-1358 "http://rdf.glycoinfo.org/glycan/G14987PW" denotes all
GlycanIUPAC_T8 1355-1358 "http://rdf.glycoinfo.org/glycan/G95064PC" denotes all
GlycanIUPAC_T9 1355-1358 "http://rdf.glycoinfo.org/glycan/G39143AQ" denotes all
GlycanIUPAC_T10 1355-1358 "http://rdf.glycoinfo.org/glycan/G65149OO" denotes all
GlycanIUPAC_T11 1355-1358 "http://rdf.glycoinfo.org/glycan/G02766SY" denotes all
GlycanIUPAC_T12 1355-1358 "http://rdf.glycoinfo.org/glycan/G26019KJ" denotes all
GlycanIUPAC_T13 1355-1358 "http://rdf.glycoinfo.org/glycan/G36429CZ" denotes all
GlycanIUPAC_T14 1355-1358 "http://rdf.glycoinfo.org/glycan/G89633TP" denotes all
GlycanIUPAC_T15 1355-1358 "http://rdf.glycoinfo.org/glycan/G28494FO" denotes all
GlycanIUPAC_T16 1355-1358 "http://rdf.glycoinfo.org/glycan/G06219CP" denotes all
GlycanIUPAC_T17 1355-1358 "http://rdf.glycoinfo.org/glycan/G44237SM" denotes all
GlycanIUPAC_T18 1355-1358 "http://rdf.glycoinfo.org/glycan/G57948RL" denotes all
GlycanIUPAC_T19 1355-1358 "http://rdf.glycoinfo.org/glycan/G64016DN" denotes all
GlycanIUPAC_T20 1355-1358 "http://rdf.glycoinfo.org/glycan/G14536PC" denotes all
GlycanIUPAC_T21 1355-1358 "http://rdf.glycoinfo.org/glycan/G14356FW" denotes all
GlycanIUPAC_T22 1355-1358 "http://rdf.glycoinfo.org/glycan/G34565UO" denotes all
GlycanIUPAC_T23 1355-1358 "http://rdf.glycoinfo.org/glycan/G67124MW" denotes all
GlycanIUPAC_T24 1355-1358 "http://rdf.glycoinfo.org/glycan/G71457ZU" denotes all
GlycanIUPAC_T25 1355-1358 "http://rdf.glycoinfo.org/glycan/G55228VZ" denotes all
GlycanIUPAC_T26 1355-1358 "http://rdf.glycoinfo.org/glycan/G31034MJ" denotes all
GlycanIUPAC_T27 1355-1358 "http://rdf.glycoinfo.org/glycan/G25776IP" denotes all
GlycanIUPAC_T28 1355-1358 "http://rdf.glycoinfo.org/glycan/G64442BV" denotes all
GlycanIUPAC_T29 1355-1358 "http://rdf.glycoinfo.org/glycan/G57018LE" denotes all
GlycanIUPAC_T30 1355-1358 "http://rdf.glycoinfo.org/glycan/G61761GX" denotes all
GlycanIUPAC_T31 1355-1358 "http://rdf.glycoinfo.org/glycan/G76318UX" denotes all
GlycanIUPAC_T32 1355-1358 "http://rdf.glycoinfo.org/glycan/G61906ER" denotes all
GlycanIUPAC_T33 1355-1358 "http://rdf.glycoinfo.org/glycan/G68723GR" denotes all
GlycanIUPAC_T34 1355-1358 "http://rdf.glycoinfo.org/glycan/G19540LE" denotes all
GlycanIUPAC_T35 1355-1358 "http://rdf.glycoinfo.org/glycan/G74944PO" denotes all
GlycanIUPAC_T36 1355-1358 "http://rdf.glycoinfo.org/glycan/G89489ZJ" denotes all
GlycanIUPAC_T37 1355-1358 "http://rdf.glycoinfo.org/glycan/G04434YU" denotes all
GlycanIUPAC_T38 1355-1358 "http://rdf.glycoinfo.org/glycan/G21450PB" denotes all
GlycanIUPAC_T39 1355-1358 "http://rdf.glycoinfo.org/glycan/G93629QY" denotes all
GlycanIUPAC_T40 1355-1358 "http://rdf.glycoinfo.org/glycan/G02603TR" denotes all
GlycanIUPAC_T41 1355-1358 "http://rdf.glycoinfo.org/glycan/G40280JP" denotes all
GlycanIUPAC_T42 1355-1358 "http://rdf.glycoinfo.org/glycan/G95259IC" denotes all
GlycanIUPAC_T43 1355-1358 "http://rdf.glycoinfo.org/glycan/G26900FE" denotes all
GlycanIUPAC_T44 1355-1358 "http://rdf.glycoinfo.org/glycan/G21346KK" denotes all
GlycanIUPAC_T45 1355-1358 "http://rdf.glycoinfo.org/glycan/G62509FF" denotes all
GlycanIUPAC_T46 1355-1358 "http://rdf.glycoinfo.org/glycan/G83932AK" denotes all
GlycanIUPAC_T47 1355-1358 "http://rdf.glycoinfo.org/glycan/G96978IB" denotes all
GlycanIUPAC_T48 1355-1358 "http://rdf.glycoinfo.org/glycan/G34275DN" denotes all
GlycanIUPAC_T49 1355-1358 "http://rdf.glycoinfo.org/glycan/G07071JF" denotes all
GlycanIUPAC_T50 1355-1358 "http://rdf.glycoinfo.org/glycan/G80639QD" denotes all
GlycanIUPAC_T51 1355-1358 "http://rdf.glycoinfo.org/glycan/G99460PJ" denotes all
GlycanIUPAC_T52 1355-1358 "http://rdf.glycoinfo.org/glycan/G22024BZ" denotes all
GlycanIUPAC_T53 1355-1358 "http://rdf.glycoinfo.org/glycan/G74097ZY" denotes all
GlycanIUPAC_T54 1355-1358 "http://rdf.glycoinfo.org/glycan/G84439YP" denotes all
GlycanIUPAC_T55 1355-1358 "http://rdf.glycoinfo.org/glycan/G52207WQ" denotes all
GlycanIUPAC_T56 1355-1358 "http://rdf.glycoinfo.org/glycan/G90695MS" denotes all
GlycanIUPAC_T57 1355-1358 "http://rdf.glycoinfo.org/glycan/G50398QX" denotes all
GlycanIUPAC_T58 1355-1358 "http://rdf.glycoinfo.org/glycan/G12166ZT" denotes all
GlycanIUPAC_T59 1355-1358 "http://rdf.glycoinfo.org/glycan/G48368BR" denotes all
GlycanIUPAC_T60 1355-1358 "http://rdf.glycoinfo.org/glycan/G57407RW" denotes all
GlycanIUPAC_T61 1355-1358 "http://rdf.glycoinfo.org/glycan/G00386TY" denotes all
GlycanIUPAC_T62 1355-1358 "http://rdf.glycoinfo.org/glycan/G18723JK" denotes all
GlycanIUPAC_T63 1355-1358 "http://rdf.glycoinfo.org/glycan/G93757OR" denotes all
GlycanIUPAC_T64 1355-1358 "http://rdf.glycoinfo.org/glycan/G29006SI" denotes all
GlycanIUPAC_T65 1355-1358 "http://rdf.glycoinfo.org/glycan/G03099OQ" denotes all
GlycanIUPAC_T66 1355-1358 "http://rdf.glycoinfo.org/glycan/G53739OW" denotes all
GlycanIUPAC_T67 1355-1358 "http://rdf.glycoinfo.org/glycan/G70440ZO" denotes all
GlycanIUPAC_T68 1355-1358 "http://rdf.glycoinfo.org/glycan/G29951RR" denotes all
GlycanIUPAC_T69 1355-1358 "http://rdf.glycoinfo.org/glycan/G58402TI" denotes all
GlycanIUPAC_T70 1355-1358 "http://rdf.glycoinfo.org/glycan/G39875TP" denotes all
GlycanIUPAC_T71 1355-1358 "http://rdf.glycoinfo.org/glycan/G83439QV" denotes all
GlycanIUPAC_T72 1355-1358 "http://rdf.glycoinfo.org/glycan/G41762RC" denotes all
GlycanIUPAC_T73 1355-1358 "http://rdf.glycoinfo.org/glycan/G91604UI" denotes all
GlycanIUPAC_T74 1355-1358 "http://rdf.glycoinfo.org/glycan/G88447WE" denotes all
GlycanIUPAC_T75 1355-1358 "http://rdf.glycoinfo.org/glycan/G93634BS" denotes all
GlycanIUPAC_T76 1355-1358 "http://rdf.glycoinfo.org/glycan/G02587BH" denotes all
GlycanIUPAC_T77 1355-1358 "http://rdf.glycoinfo.org/glycan/G43511MX" denotes all
GlycanIUPAC_T78 1355-1358 "http://rdf.glycoinfo.org/glycan/G64958DH" denotes all
GlycanIUPAC_T79 1355-1358 "http://rdf.glycoinfo.org/glycan/G30384TR" denotes all
GlycanIUPAC_T80 1355-1358 "http://rdf.glycoinfo.org/glycan/G15624EX" denotes all
GlycanIUPAC_T81 1355-1358 "http://rdf.glycoinfo.org/glycan/G22706ST" denotes all
GlycanIUPAC_T82 1355-1358 "http://rdf.glycoinfo.org/glycan/G57408PI" denotes all
GlycanIUPAC_T83 1355-1358 "http://rdf.glycoinfo.org/glycan/G86403XX" denotes all
GlycanIUPAC_T84 1355-1358 "http://rdf.glycoinfo.org/glycan/G78043YB" denotes all
GlycanIUPAC_T85 1355-1358 "http://rdf.glycoinfo.org/glycan/G18952JK" denotes all
GlycanIUPAC_T86 1355-1358 "http://rdf.glycoinfo.org/glycan/G49020ND" denotes all
GlycanIUPAC_T87 1355-1358 "http://rdf.glycoinfo.org/glycan/G63590YW" denotes all
GlycanIUPAC_T88 1355-1358 "http://rdf.glycoinfo.org/glycan/G22793KS" denotes all
GlycanIUPAC_T89 1355-1358 "http://rdf.glycoinfo.org/glycan/G64134SS" denotes all
GlycanIUPAC_T90 1355-1358 "http://rdf.glycoinfo.org/glycan/G17338HY" denotes all
GlycanIUPAC_T91 1355-1358 "http://rdf.glycoinfo.org/glycan/G99745XF" denotes all
GlycanIUPAC_T92 1355-1358 "http://rdf.glycoinfo.org/glycan/G27782HN" denotes all
GlycanIUPAC_T93 1355-1358 "http://rdf.glycoinfo.org/glycan/G57496DC" denotes all
GlycanIUPAC_T94 1355-1358 "http://rdf.glycoinfo.org/glycan/G93169WB" denotes all
GlycanIUPAC_T95 1355-1358 "http://rdf.glycoinfo.org/glycan/G05518TD" denotes all
GlycanIUPAC_T96 1355-1358 "http://rdf.glycoinfo.org/glycan/G62603DN" denotes all
GlycanIUPAC_T97 1355-1358 "http://rdf.glycoinfo.org/glycan/G59574FS" denotes all
GlycanIUPAC_T98 1355-1358 "http://rdf.glycoinfo.org/glycan/G47567WC" denotes all

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 2586-2594 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organize
PD-UBERON-AE-B_T2 2509-2516 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 511-522 Body_part denotes prokaryotic http://purl.obolibrary.org/obo/MAT_0000190

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 2517-2521 OrganismTaxon denotes idea 76236

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 347-360 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020
T2 2586-2594 Body_part denotes organize http://purl.obolibrary.org/obo/UBERON_0003062|http://purl.obolibrary.org/obo/UBERON_3010449|http://purl.obolibrary.org/obo/UBERON_3010457