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PubMed:12581311 JSONTXT

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Oryza-OGER

Id Subject Object Predicate Lexical cue
T1 10-13 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T2 10-13 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T3 32-36 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T4 32-36 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T5 32-36 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T6 37-44 http://purl.obolibrary.org/obo/SO_0000180 denotes class-I
T7 50-57 http://id.nlm.nih.gov/mesh/D006657 denotes histone
T8 50-57 http://purl.obolibrary.org/obo/CHEBI_15358 denotes histone
T9 50-57 http://purl.obolibrary.org/obo/PR_000041244 denotes histone
T10 50-69 http://id.nlm.nih.gov/mesh/D006655 denotes histone deacetylase
T11 76-83 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T12 76-83 HDAC1 denotes OsHDAC1
T13 84-85 AMT1;2 denotes 3
T14 87-94 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T15 87-94 HDAC1 denotes OsHDAC1
T16 113-123 http://purl.obolibrary.org/obo/SO_0000781 denotes transgenic
T17 113-130 http://id.nlm.nih.gov/mesh/D030821 denotes transgenic plants
T18 124-130 http://id.nlm.nih.gov/mesh/D010944 denotes plants
T19 150-156 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T20 162-165 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T21 162-165 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T22 188-195 http://id.nlm.nih.gov/mesh/D006657 denotes Histone
T23 188-195 http://purl.obolibrary.org/obo/CHEBI_15358 denotes Histone
T24 188-195 http://purl.obolibrary.org/obo/PR_000041244 denotes Histone
T25 188-208 http://id.nlm.nih.gov/mesh/D006655 denotes Histone deacetylases
T26 226-235 http://id.nlm.nih.gov/mesh/D002843 denotes chromatin
T27 226-235 http://purl.obolibrary.org/obo/GO_0000785 denotes chromatin
T28 246-249 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T29 246-249 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T30 250-263 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T31 326-339 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T32 357-361 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T33 357-361 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T34 357-361 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T35 362-369 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T36 362-369 HDAC1 denotes OsHDAC1
T37 370-371 AMT1;2 denotes 3
T38 378-381 http://purl.obolibrary.org/obo/PR_Q9NZC7 denotes for
T39 378-381 http://purl.obolibrary.org/obo/PR_000001036 denotes for
T40 382-389 http://purl.obolibrary.org/obo/SO_0000180 denotes class I
T41 395-402 http://id.nlm.nih.gov/mesh/D006657 denotes histone
T42 395-402 http://purl.obolibrary.org/obo/CHEBI_15358 denotes histone
T43 395-402 http://purl.obolibrary.org/obo/PR_000041244 denotes histone
T44 395-415 http://id.nlm.nih.gov/mesh/D006655 denotes histone deacetylases
T45 423-426 http://purl.obolibrary.org/obo/SO_0001180 denotes are
T46 423-426 http://purl.obolibrary.org/obo/SO_0001853 denotes are
T47 442-446 http://purl.obolibrary.org/obo/PR_Q94517 denotes RPD3
T48 442-446 http://purl.obolibrary.org/obo/PR_P32561 denotes RPD3
T49 445-446 AMT1;2 denotes 3
T50 459-466 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T51 459-466 HDAC1 denotes OsHDAC1
T52 467-471 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T53 480-489 http://www.uniprot.org/uniprot/P98005 denotes a protein
T54 480-489 http://www.uniprot.org/uniprot/P09676 denotes a protein
T55 480-489 http://www.uniprot.org/uniprot/P07928 denotes a protein
T56 480-489 http://www.uniprot.org/uniprot/P15966 denotes a protein
T57 480-489 http://www.uniprot.org/uniprot/P03610 denotes a protein
T58 480-489 http://www.uniprot.org/uniprot/P25244 denotes a protein
T59 480-489 http://www.uniprot.org/uniprot/P07394 denotes a protein
T60 480-489 http://www.uniprot.org/uniprot/P03632 denotes a protein
T61 480-489 http://www.uniprot.org/uniprot/P25243 denotes a protein
T62 480-489 http://www.uniprot.org/uniprot/P35823 denotes a protein
T63 480-489 http://www.uniprot.org/uniprot/O64306 denotes a protein
T64 482-489 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T65 482-489 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T66 482-489 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T67 482-489 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T68 482-489 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T69 482-489 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T70 544-547 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T71 544-547 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T72 554-559 http://purl.obolibrary.org/obo/CHEBI_46882 denotes amino
T73 554-564 http://purl.obolibrary.org/obo/SO_0001237 denotes amino acid
T74 554-564 http://purl.obolibrary.org/obo/CHEBI_33709 denotes amino acid
T75 554-564 http://purl.obolibrary.org/obo/CHEBI_33704 denotes amino acid
T76 560-564 http://purl.obolibrary.org/obo/CHEBI_37527 denotes acid
T77 565-573 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T78 592-599 HDAC2 denotes OsHDAC2
T79 592-599 http://www.uniprot.org/uniprot/Q6YV04 denotes OsHDAC2
T80 598-599 AMT1;3 denotes 2
T81 601-608 http://www.uniprot.org/uniprot/Q7Y0Y6 denotes OsHDAC3
T82 601-608 HDAC3 denotes OsHDAC3
T83 607-608 AMT1;2 denotes 3
T84 610-615 http://www.ncbi.nlm.nih.gov/taxonomy/4577 denotes maize
T85 610-615 http://id.nlm.nih.gov/mesh/D003313 denotes maize
T86 616-620 http://purl.obolibrary.org/obo/PR_Q94517 denotes RPD3
T87 616-620 http://purl.obolibrary.org/obo/PR_P32561 denotes RPD3
T88 619-620 AMT1;2 denotes 3
T89 622-625 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T90 622-625 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T91 626-631 http://id.nlm.nih.gov/mesh/D006801 denotes human
T92 626-631 http://www.ncbi.nlm.nih.gov/taxonomy/9606 denotes human
T93 632-636 http://purl.obolibrary.org/obo/PR_Q54VQ7 denotes HDAC
T94 632-637 http://purl.obolibrary.org/obo/PR_Q13547 denotes HDAC1
T95 632-637 http://purl.obolibrary.org/obo/PR_P56517 denotes HDAC1
T96 632-637 http://purl.obolibrary.org/obo/PR_000008478 denotes HDAC1
T97 632-637 http://purl.obolibrary.org/obo/PR_Q4QQW4 denotes HDAC1
T98 632-637 http://purl.obolibrary.org/obo/PR_O09106 denotes HDAC1
T99 632-637 http://purl.obolibrary.org/obo/PR_Q94517 denotes HDAC1
T100 638-646 http://id.nlm.nih.gov/mesh/D011506 denotes proteins
T101 638-646 http://purl.obolibrary.org/obo/CHEBI_36080 denotes proteins
T102 681-684 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T103 681-684 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T104 694-698 http://purl.obolibrary.org/obo/PR_Q86XP6 denotes blot
T105 694-698 http://purl.obolibrary.org/obo/PR_Q29TV8 denotes blot
T106 694-698 http://purl.obolibrary.org/obo/PR_Q9CQS6 denotes blot
T107 694-698 http://purl.obolibrary.org/obo/PR_000008014 denotes blot
T108 722-729 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T109 722-729 HDAC1 denotes OsHDAC1
T110 730-731 AMT1;2 denotes 3
T111 749-752 http://www.uniprot.org/uniprot/Q804H7 denotes six
T112 754-757 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T113 754-757 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T114 785-788 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T115 785-788 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T116 803-810 http://purl.obolibrary.org/obo/SO_0000180 denotes class I
T117 830-834 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T118 830-834 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T119 830-834 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T120 835-841 http://purl.obolibrary.org/obo/SO_0001026 denotes genome
T121 843-850 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T122 843-850 HDAC1 denotes OsHDAC1
T123 851-854 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T124 851-854 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T125 851-854 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T126 851-854 http://id.nlm.nih.gov/mesh/D014923 denotes was
T127 905-908 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T128 905-908 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T129 931-938 HDAC2 denotes OsHDAC2
T130 931-938 http://www.uniprot.org/uniprot/Q6YV04 denotes OsHDAC2
T131 937-938 AMT1;3 denotes 2
T132 939-942 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T133 939-942 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T134 939-944 http://web.expasy.org/cellosaurus/CVCL_B528 denotes and 3
T135 943-944 AMT1;2 denotes 3
T136 973-976 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T137 973-976 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T138 995-998 http://purl.obolibrary.org/obo/PR_Q9VVR1 denotes not
T139 995-998 http://purl.obolibrary.org/obo/PR_000011409 denotes not
T140 995-998 http://purl.obolibrary.org/obo/PR_P43354 denotes not
T141 995-998 http://purl.obolibrary.org/obo/PR_000003944 denotes not
T142 995-998 http://purl.obolibrary.org/obo/PR_Q5TIS6 denotes not
T143 995-998 http://purl.obolibrary.org/obo/PR_Q92685 denotes not
T144 995-998 http://purl.obolibrary.org/obo/PR_Q8K2A8 denotes not
T145 995-998 http://purl.obolibrary.org/obo/PR_000011336 denotes not
T146 1034-1040 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T147 1069-1073 http://purl.obolibrary.org/obo/UBERON_2002175 denotes role
T148 1069-1073 http://purl.obolibrary.org/obo/CHEBI_50906 denotes role
T149 1077-1084 http://id.nlm.nih.gov/mesh/D006657 denotes histone
T150 1077-1084 http://purl.obolibrary.org/obo/CHEBI_15358 denotes histone
T151 1077-1084 http://purl.obolibrary.org/obo/PR_000041244 denotes histone
T152 1077-1097 http://id.nlm.nih.gov/mesh/D006655 denotes histone deacetylases
T153 1101-1111 http://purl.obolibrary.org/obo/SO_0000781 denotes transgenic
T154 1101-1118 http://id.nlm.nih.gov/mesh/D030821 denotes transgenic plants
T155 1112-1118 http://id.nlm.nih.gov/mesh/D010944 denotes plants
T156 1136-1143 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T157 1136-1143 HDAC1 denotes OsHDAC1
T158 1144-1148 http://id.nlm.nih.gov/mesh/D018076 denotes cDNA
T159 1144-1148 http://purl.obolibrary.org/obo/SO_0000756 denotes cDNA
T160 1149-1157 http://purl.obolibrary.org/obo/SO_0000731 denotes fragment
T161 1167-1184 http://www.ncbi.nlm.nih.gov/taxonomy/81076 denotes expression vector
T162 1178-1184 http://purl.obolibrary.org/obo/SO_0000440 denotes vector
T163 1189-1196 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T164 1189-1196 HDAC1 denotes OsHDAC1
T165 1222-1225 http://purl.obolibrary.org/obo/CHEBI_28937 denotes ABA
T166 1222-1225 ASR1 denotes ABA
T167 1222-1225 http://purl.obolibrary.org/obo/CHEBI_2365 denotes ABA
T168 1222-1225 ASR4 denotes ABA
T169 1222-1225 ASR5 denotes ABA
T170 1222-1225 ASR2 denotes ABA
T171 1222-1225 http://www.uniprot.org/uniprot/Q00022 denotes ABA
T172 1222-1225 http://purl.obolibrary.org/obo/CHEBI_53554 denotes ABA
T173 1222-1225 ASR3 denotes ABA
T174 1226-1244 http://purl.obolibrary.org/obo/SO_0002051 denotes inducible promoter
T175 1236-1244 http://purl.obolibrary.org/obo/SO_0000167 denotes promoter
T176 1249-1252 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T177 1249-1252 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T178 1269-1278 http://purl.obolibrary.org/obo/SO_0000804 denotes construct
T179 1284-1288 http://id.nlm.nih.gov/mesh/D012275 denotes rice
T180 1284-1288 http://purl.bioontology.org/ontology/RXNORM/1311040 denotes rice
T181 1284-1288 http://www.ncbi.nlm.nih.gov/taxonomy/4530 denotes rice
T182 1300-1304 http://id.nlm.nih.gov/mesh/D012333 denotes mRNA
T183 1300-1304 http://purl.obolibrary.org/obo/SO_0000234 denotes mRNA
T184 1300-1304 http://purl.obolibrary.org/obo/CHEBI_33699 denotes mRNA
T185 1306-1313 http://purl.obolibrary.org/obo/CHEBI_11122 denotes protein
T186 1306-1313 http://purl.obolibrary.org/obo/SO_0000104 denotes protein
T187 1306-1313 http://purl.obolibrary.org/obo/PR_000000001 denotes protein
T188 1306-1313 http://purl.obolibrary.org/obo/CHEBI_16541 denotes protein
T189 1306-1313 http://purl.obolibrary.org/obo/GO_0003675 denotes protein
T190 1306-1313 http://purl.obolibrary.org/obo/CHEBI_36080 denotes protein
T191 1315-1318 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T192 1315-1318 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T193 1319-1323 http://purl.obolibrary.org/obo/PR_Q54VQ7 denotes HDAC
T194 1369-1376 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T195 1369-1376 HDAC1 denotes OsHDAC1
T196 1405-1410 http://www.ncbi.nlm.nih.gov/taxonomy/42554 denotes tetra
T197 1405-1410 http://id.nlm.nih.gov/mesh/D060126 denotes tetra
T198 1405-1410 http://purl.obolibrary.org/obo/CHEBI_27385 denotes tetra
T199 1432-1442 http://purl.obolibrary.org/obo/SO_0000781 denotes transgenic
T200 1449-1452 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T201 1449-1452 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T202 1449-1452 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T203 1449-1452 http://id.nlm.nih.gov/mesh/D014923 denotes was
T204 1470-1473 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T205 1470-1473 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T206 1478-1487 http://purl.obolibrary.org/obo/MOP_0000569 denotes reduction
T207 1488-1491 http://purl.obolibrary.org/obo/PR_000017371 denotes was
T208 1488-1491 http://purl.obolibrary.org/obo/PR_P42768 denotes was
T209 1488-1491 http://purl.obolibrary.org/obo/PR_P70315 denotes was
T210 1488-1491 http://id.nlm.nih.gov/mesh/D014923 denotes was
T211 1522-1534 http://purl.obolibrary.org/obo/CHEBI_39146 denotes trichostatin
T212 1522-1536 http://purl.obolibrary.org/obo/CHEBI_46024 denotes trichostatin A
T213 1522-1536 http://id.nlm.nih.gov/mesh/C012589 denotes trichostatin A
T214 1522-1536 http://id.nlm.nih.gov/mesh/C012589 denotes trichostatin A
T215 1569-1576 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T216 1569-1576 HDAC1 denotes OsHDAC1
T217 1595-1605 http://purl.obolibrary.org/obo/SO_0000781 denotes transgenic
T218 1645-1649 http://purl.obolibrary.org/obo/PR_Q54VQ7 denotes HDAC
T219 1660-1663 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T220 1660-1663 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T221 1683-1690 http://id.nlm.nih.gov/mesh/D006657 denotes histone
T222 1683-1690 http://purl.obolibrary.org/obo/CHEBI_15358 denotes histone
T223 1683-1690 http://purl.obolibrary.org/obo/PR_000041244 denotes histone
T224 1683-1702 http://purl.obolibrary.org/obo/SO_0001702 denotes histone acetylation
T225 1683-1702 http://purl.obolibrary.org/obo/GO_0016573 denotes histone acetylation
T226 1691-1702 http://purl.obolibrary.org/obo/MOP_0000030 denotes acetylation
T227 1737-1741 http://www.uniprot.org/uniprot/A7MBU6 denotes to a
T228 1789-1795 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T229 1801-1804 http://purl.obolibrary.org/obo/PR_P49258 denotes and
T230 1801-1804 http://www.ncbi.nlm.nih.gov/taxonomy/1481724 denotes and
T231 1813-1818 http://id.nlm.nih.gov/mesh/D010944 denotes plant
T232 1849-1856 http://www.uniprot.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T233 1849-1856 HDAC1 denotes OsHDAC1
T234 1874-1880 http://purl.obolibrary.org/obo/SO_0001026 denotes genome
T235 1901-1905 http://purl.obolibrary.org/obo/SO_0000704 denotes gene
T236 1901-1916 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 1624-1659 cand:TO:0000324-rubisco to soluble protein ratio denotes enzymatically active HDAC complexes
M_1 1624-1659 cand:funRiceGene:129-protein kinase denotes enzymatically active HDAC complexes
M_2 1624-1659 cand:funRiceGene:171-histone trimethylation denotes enzymatically active HDAC complexes
M_3 1624-1659 cand:funRiceGene:338-N-glycan formation denotes enzymatically active HDAC complexes
M_4 1624-1659 cand:TO:0000610-soluble to total protein ratio denotes enzymatically active HDAC complexes
M_5 1624-1659 cand:funRiceGene:228-transcriptional activator denotes enzymatically active HDAC complexes
M_6 1624-1659 cand:PO:0025190-leaf abaxial stomatal complex denotes enzymatically active HDAC complexes
M_7 1624-1659 cand:PO:0025221-tepal stomatal complex denotes enzymatically active HDAC complexes
M_8 1624-1659 cand:PO:0025189-petiole stomatal complex denotes enzymatically active HDAC complexes
M_9 1624-1659 cand:PO:0025191-leaf adaxial stomatal complex denotes enzymatically active HDAC complexes
M_10 1624-1659 cand:PO:0025185-leaf lamina stomatal complex denotes enzymatically active HDAC complexes
M_11 610-620 cand:TO:0020007-sorghum shoot fly resistance denotes maize RPD3
M_12 610-620 cand:TO:0020008-sorghum grain mold denotes maize RPD3
M_13 610-620 cand:TO:0020005-sorghum stem borer resistance denotes maize RPD3
M_14 610-620 cand:TO:0020015-sorghum leaf blight resistance denotes maize RPD3
M_15 610-620 cand:TO:0000138-brown rice protein denotes maize RPD3
M_16 610-620 cand:TO:0020006-chickpea pod borer denotes maize RPD3
M_17 610-620 cand:PO:0030078-rhizoid denotes maize RPD3
M_18 610-620 cand:TO:0000638-spike width denotes maize RPD3
M_19 610-620 cand:PO:0009087-mesocarp denotes maize RPD3
M_20 610-620 cand:PO:0009030-carpel denotes maize RPD3
M_21 610-620 cand:PO:0004516-late wood denotes maize RPD3
M_22 1779-1800 cand:funRiceGene:155-growth rate denotes increased growth rate
M_23 1779-1800 cand:TO:0000515-relative growth rate denotes increased growth rate
M_24 1779-1800 cand:PPO:0007001-initial growth cycle denotes increased growth rate
M_25 1779-1800 cand:PO:0007004-rapid growth stage denotes increased growth rate
M_26 1779-1800 cand:PPO:0007002-later growth cycle denotes increased growth rate
M_27 1779-1800 cand:PECO:0007165-growth hormone exposure denotes increased growth rate
M_28 1779-1800 cand:PO:0007113-rosette growth stage denotes increased growth rate
M_29 1779-1800 cand:PO:0007004-3 rapid growth stage denotes increased growth rate
M_30 1422-1424 GeneID:RAPID:Os10g0539500|Os07g0549900|Os09g0553100MSUID:LOC_Os07g36500|LOC_Os10g39410|LOC_Os09g38020 denotes H4
M_31 459-466 GeneID:RAPID:Os06g0583400MSUID:LOC_Os06g38470 denotes OsHDAC1
M_32 1849-1856 GeneID:RAPID:Os06g0583400MSUID:LOC_Os06g38470 denotes OsHDAC1
T15724 1813-1831 funRiceGene:494, xzyao:14955 denotes plant architecture
T36616 174-186 funRiceGene:351 denotes architecture
T90083 1819-1831 funRiceGene:351 denotes architecture
T86150 150-156 WTO:0000021, funRiceGene:221 denotes growth
T40763 1789-1795 WTO:0000021, funRiceGene:221 denotes growth
T4972 1222-1225 funRiceGene:140 denotes ABA
T39192 1203-1214 xzyao:15868 denotes the control
T57072 150-161 funRiceGene:106, xzyao:18538 denotes growth rate
T72809 1789-1800 funRiceGene:106, xzyao:18538 denotes growth rate
T8172 1683-1702 xzyao:39777 denotes histone acetylation
T29791 1805-1831 xzyao:15860 denotes altered plant architecture
T84684 1624-1659 xzyao:38795 denotes enzymatically active HDAC complexes
T19607 140-161 xzyao:43600 denotes increased growth rate
T51129 1779-1800 xzyao:43600 denotes increased growth rate
T18104 909-915 funRiceGene:113 denotes callus
T4135 977-983 funRiceGene:113 denotes callus
T9257 1377-1383 funRiceGene:113 denotes callus
T99713 554-564 xzyao:10364 denotes amino acid
T30314 909-921 xzyao:29541 denotes callus cells
T76163 977-989 xzyao:29541 denotes callus cells
T35249 1377-1389 xzyao:29541 denotes callus cells
T40984 626-631 hunflair:NA:Species denotes human
T75144 931-944 hunflair:NA:Gene denotes OsHDAC2 and 3
T25786 1422-1424 hunflair:NA:Gene denotes H4
T86767 188-208 hunflair:NA:Gene denotes Histone deacetylases
T47011 554-564 hunflair:NA:Chemical denotes amino acid
T45368 50-57 hunflair:NA:Chemical denotes histone
T68806 395-402 hunflair:NA:Chemical denotes histone
T42481 1077-1084 hunflair:NA:Chemical denotes histone
T47922 1683-1690 hunflair:NA:Chemical denotes histone
T6554 76-85 hunflair:NA:Gene denotes OsHDAC1-3
T74332 362-371 hunflair:NA:Gene denotes OsHDAC1-3
T46137 722-731 hunflair:NA:Gene denotes OsHDAC1-3
M_33 210-215 hunflair:NA:Gene denotes HDACs
M_34 265-270 hunflair:NA:Gene denotes HDACs
M_35 601-608 hunflair:NA:Gene denotes OsHDAC3
M_36 395-415 hunflair:NA:Gene denotes histone deacetylases
M_37 1077-1097 hunflair:NA:Gene denotes histone deacetylases
M_38 1222-1225 hunflair:NA:Chemical denotes ABA
M_39 592-599 hunflair:NA:Gene denotes OsHDAC2
M_40 931-938 hunflair:NA:Gene denotes OsHDAC2
M_41 382-415 hunflair:NA:Gene denotes class I-type histone deacetylases
M_42 442-446 hunflair:NA:Gene denotes RPD3
M_43 616-620 hunflair:NA:Gene denotes RPD3
M_44 610-615 hunflair:NA:Species denotes maize
M_45 442-453 hunflair:NA:Gene denotes RPD3 family
M_46 76-83 hunflair:NA:Gene denotes OsHDAC1
M_47 87-94 hunflair:NA:Gene denotes OsHDAC1
M_48 362-369 hunflair:NA:Gene denotes OsHDAC1
M_49 459-466 hunflair:NA:Gene denotes OsHDAC1
M_50 722-729 hunflair:NA:Gene denotes OsHDAC1
M_51 843-850 hunflair:NA:Gene denotes OsHDAC1
M_52 1136-1143 hunflair:NA:Gene denotes OsHDAC1
M_53 1189-1196 hunflair:NA:Gene denotes OsHDAC1
M_54 1369-1376 hunflair:NA:Gene denotes OsHDAC1
M_55 1569-1576 hunflair:NA:Gene denotes OsHDAC1
M_56 1849-1856 hunflair:NA:Gene denotes OsHDAC1
M_57 1319-1323 hunflair:NA:Gene denotes HDAC
M_58 1645-1649 hunflair:NA:Gene denotes HDAC
M_59 632-637 hunflair:NA:Gene denotes HDAC1
M_60 32-36 hunflair:NA:Species denotes rice
M_61 357-361 hunflair:NA:Species denotes rice
M_62 830-834 hunflair:NA:Species denotes rice
M_63 1284-1288 hunflair:NA:Species denotes rice
M_64 442-446 pubtator:541883:Gene denotes RPD3
M_65 616-620 pubtator:541883:Gene denotes RPD3
M_66 632-637 pubtator:3065:Gene denotes HDAC1
M_67 1405-1410 pubtator:42554:Species denotes tetra
M_68 1522-1536 pubtator:MESH:C012589:Chemical denotes trichostatin A
M_69 32-36 pubtator:4530:Species denotes rice
M_70 357-361 pubtator:4530:Species denotes rice
M_71 830-834 pubtator:4530:Species denotes rice
M_72 1284-1288 pubtator:4530:Species denotes rice
M_73 626-631 pubtator:9606:Species denotes human
M_74 610-615 pubtator:4577:Species denotes maize

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 1789-1800 funRiceGene:106, xzyao:5698 denotes growth rate
M_1 1789-1795 WTO:0000021, funRiceGene:221 denotes growth
M_2 662-680 xzyao:12117 denotes Genomic structures
M_3 909-915 funRiceGene:113 denotes callus
M_4 977-983 funRiceGene:113 denotes callus
M_5 1377-1383 funRiceGene:113 denotes callus
M_6 76-83 hunflair:NA:Gene denotes OsHDAC1
M_7 87-94 hunflair:NA:Gene denotes OsHDAC1
M_8 362-369 hunflair:NA:Gene denotes OsHDAC1
M_9 459-466 hunflair:NA:Gene denotes OsHDAC1
M_10 722-729 hunflair:NA:Gene denotes OsHDAC1
M_11 843-850 hunflair:NA:Gene denotes OsHDAC1
M_12 1136-1143 hunflair:NA:Gene denotes OsHDAC1
M_13 1189-1196 hunflair:NA:Gene denotes OsHDAC1
M_14 1369-1376 hunflair:NA:Gene denotes OsHDAC1
M_15 1569-1576 hunflair:NA:Gene denotes OsHDAC1
M_16 1849-1856 hunflair:NA:Gene denotes OsHDAC1
M_17 188-208 hunflair:NA:Gene denotes Histone deacetylases
M_18 592-599 hunflair:NA:Gene denotes OsHDAC2
M_19 931-938 hunflair:NA:Gene denotes OsHDAC2
M_20 76-85 hunflair:NA:Gene denotes OsHDAC1-3
M_21 362-371 hunflair:NA:Gene denotes OsHDAC1-3
M_22 722-731 hunflair:NA:Gene denotes OsHDAC1-3
M_23 442-453 hunflair:NA:Gene denotes RPD3 family
M_24 442-446 hunflair:NA:Gene denotes RPD3
M_25 616-620 hunflair:NA:Gene denotes RPD3
M_26 601-608 hunflair:NA:Gene denotes OsHDAC3
M_27 931-944 hunflair:NA:Gene denotes OsHDAC2 and 3
M_28 554-564 hunflair:NA:Chemical denotes amino acid
M_29 626-631 hunflair:NA:Species denotes human
M_30 632-637 hunflair:NA:Gene denotes HDAC1
M_31 1422-1424 hunflair:NA:Gene denotes H4
M_32 382-415 hunflair:NA:Gene denotes class I-type histone deacetylases
M_33 610-615 hunflair:NA:Species denotes maize
M_34 210-215 hunflair:NA:Gene denotes HDACs
M_35 265-270 hunflair:NA:Gene denotes HDACs
M_36 1222-1225 hunflair:NA:Chemical denotes ABA
M_37 32-36 hunflair:NA:Species denotes rice
M_38 357-361 hunflair:NA:Species denotes rice
M_39 830-834 hunflair:NA:Species denotes rice
M_40 1284-1288 hunflair:NA:Species denotes rice
M_41 50-57 hunflair:NA:Chemical denotes histone
M_42 395-402 hunflair:NA:Chemical denotes histone
M_43 1077-1084 hunflair:NA:Chemical denotes histone
M_44 1683-1690 hunflair:NA:Chemical denotes histone
M_45 1319-1323 hunflair:NA:Gene denotes HDAC
M_46 1645-1649 hunflair:NA:Gene denotes HDAC
M_47 395-415 hunflair:NA:Gene denotes histone deacetylases
M_48 1077-1097 hunflair:NA:Gene denotes histone deacetylases
M_49 1522-1536 pubtator:MESH:C012589:Chemical denotes trichostatin A
M_50 626-631 pubtator:9606:Species denotes human
M_51 442-446 pubtator:541883:Gene denotes RPD3
M_52 616-620 pubtator:541883:Gene denotes RPD3
M_53 632-637 pubtator:3065:Gene denotes HDAC1
M_54 32-36 pubtator:4530:Species denotes rice
M_55 357-361 pubtator:4530:Species denotes rice
M_56 830-834 pubtator:4530:Species denotes rice
M_57 1284-1288 pubtator:4530:Species denotes rice
M_58 1405-1410 pubtator:42554:Species denotes tetra
M_59 610-615 pubtator:4577:Species denotes maize

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 76-83 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T2 87-94 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T3 362-369 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T4 459-466 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T5 592-599 http://identifiers.org/oryzabase.gene/3109 denotes OsHDAC2
T6 601-608 http://identifiers.org/oryzabase.gene/3110 denotes OsHDAC3
T7 632-637 http://identifiers.org/oryzabase.gene/3108 denotes HDAC1
T8 722-729 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T9 843-850 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T10 931-938 http://identifiers.org/oryzabase.gene/3109 denotes OsHDAC2
T11 1136-1143 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T12 1189-1196 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T13 1222-1225 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T14 1369-1376 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T15 1422-1424 http://identifiers.org/oryzabase.gene/23746 denotes H4
T16 1422-1424 http://identifiers.org/oryzabase.gene/22420 denotes H4
T17 1422-1424 http://identifiers.org/oryzabase.gene/15721 denotes H4
T18 1422-1424 http://identifiers.org/oryzabase.gene/15718 denotes H4
T19 1569-1576 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T20 1849-1856 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T35207 76-83 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T12243 87-94 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T32861 362-369 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T56792 459-466 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T84953 592-599 http://identifiers.org/ricegap/LOC_Os02g12380 denotes OsHDAC2
T32492 601-608 http://identifiers.org/ricegap/LOC_Os02g12350 denotes OsHDAC3
T832 632-637 http://identifiers.org/ricegap/LOC_Os06g38470 denotes HDAC1
T41198 722-729 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T75248 843-850 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T46139 931-938 http://identifiers.org/ricegap/LOC_Os02g12380 denotes OsHDAC2
T21617 1136-1143 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T70344 1189-1196 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T35483 1222-1225 http://identifiers.org/ricegap/LOC_Os11g06720 denotes ABA
T50868 1222-1225 http://identifiers.org/ricegap/LOC_Os04g34600 denotes ABA
T75568 1222-1225 http://identifiers.org/ricegap/LOC_Os02g33820 denotes ABA
T7236 1222-1225 http://identifiers.org/ricegap/LOC_Os01g73250 denotes ABA
T96116 1222-1225 http://identifiers.org/ricegap/LOC_Os01g72910 denotes ABA
T28657 1222-1225 http://identifiers.org/ricegap/LOC_Os01g72900 denotes ABA
T39130 1369-1376 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T20749 1422-1424 http://identifiers.org/ricegap/LOC_Os10g39410 denotes H4
T21 1422-1424 http://identifiers.org/ricegap/LOC_Os09g38020 denotes H4
T22 1422-1424 http://identifiers.org/ricegap/LOC_Os07g36500 denotes H4
T23 1569-1576 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T24 1849-1856 http://identifiers.org/ricegap/LOC_Os06g38470 denotes OsHDAC1
T39151 76-83 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T54139 87-94 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T52866 362-369 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T53250 459-466 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T97879 592-599 http://identifiers.org/rapdb.locus/Os02g0215200 denotes OsHDAC2
T24862 601-608 http://identifiers.org/rapdb.locus/Os02g0214900 denotes OsHDAC3
T26917 632-637 http://identifiers.org/rapdb.locus/Os06g0583400 denotes HDAC1
T55007 722-729 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T77877 843-850 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T72510 931-938 http://identifiers.org/rapdb.locus/Os02g0215200 denotes OsHDAC2
T49028 1136-1143 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T12807 1189-1196 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T19973 1222-1225 http://identifiers.org/rapdb.locus/Os11g0167800 denotes ABA
T54053 1222-1225 http://identifiers.org/rapdb.locus/Os04g0423400 denotes ABA
T47928 1222-1225 http://identifiers.org/rapdb.locus/Os02g0543000 denotes ABA
T87992 1222-1225 http://identifiers.org/rapdb.locus/Os01g0963600 denotes ABA
T88237 1222-1225 http://identifiers.org/rapdb.locus/Os01g0959200 denotes ABA
T88310 1222-1225 http://identifiers.org/rapdb.locus/Os01g0959100 denotes ABA
T55811 1369-1376 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T21237 1422-1424 http://identifiers.org/rapdb.locus/Os10g0539500 denotes H4
T61770 1422-1424 http://identifiers.org/rapdb.locus/Os09g0553100 denotes H4
T87825 1422-1424 http://identifiers.org/rapdb.locus/Os07g0549900 denotes H4
T55344 1569-1576 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T45142 1849-1856 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T19150 76-83 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T83830 76-83 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T41252 87-94 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T23100 87-94 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T38121 362-369 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T33094 362-369 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T20790 459-466 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T94795 459-466 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T82957 592-599 http://identifiers.org/uniprot/Q7Y0Y7 denotes OsHDAC2
T94488 592-599 http://identifiers.org/uniprot/B9F497 denotes OsHDAC2
T51884 601-608 http://identifiers.org/uniprot/Q7Y0Y6 denotes OsHDAC3
T79667 601-608 http://identifiers.org/uniprot/B8AE72 denotes OsHDAC3
T2433 632-637 http://identifiers.org/uniprot/Q7Y0Y8 denotes HDAC1
T83478 632-637 http://identifiers.org/uniprot/B9FTW9 denotes HDAC1
T87068 722-729 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T95551 722-729 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T66150 843-850 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T53834 843-850 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T79135 931-938 http://identifiers.org/uniprot/Q7Y0Y7 denotes OsHDAC2
T25052 931-938 http://identifiers.org/uniprot/B9F497 denotes OsHDAC2
T39280 1136-1143 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T94587 1136-1143 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T43295 1189-1196 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T97121 1189-1196 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T25 1369-1376 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T26 1369-1376 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T27 1422-1424 http://identifiers.org/uniprot/B6T0P4 denotes H4
T28 1422-1424 http://identifiers.org/refseq/XP_002310853.1 denotes H4
T29 1569-1576 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T30 1569-1576 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1
T31 1849-1856 http://identifiers.org/uniprot/Q7Y0Y8 denotes OsHDAC1
T32 1849-1856 http://identifiers.org/uniprot/B9FTW9 denotes OsHDAC1

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 76-83 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T2 87-94 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T3 362-369 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T4 459-466 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T5 592-599 http://identifiers.org/oryzabase.gene/3109 denotes OsHDAC2
T6 601-608 http://identifiers.org/oryzabase.gene/3110 denotes OsHDAC3
T7 632-637 http://identifiers.org/oryzabase.gene/3108 denotes HDAC1
T8 722-729 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T9 843-850 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T10 931-938 http://identifiers.org/oryzabase.gene/3109 denotes OsHDAC2
T11 1136-1143 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T12 1189-1196 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T13 1222-1225 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T14 1369-1376 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T15 1422-1424 http://identifiers.org/oryzabase.gene/23746 denotes H4
T16 1422-1424 http://identifiers.org/oryzabase.gene/22420 denotes H4
T17 1422-1424 http://identifiers.org/oryzabase.gene/15721 denotes H4
T18 1422-1424 http://identifiers.org/oryzabase.gene/15718 denotes H4
T19 1569-1576 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T20 1849-1856 http://identifiers.org/oryzabase.gene/3108 denotes OsHDAC1
T9769 76-83 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T47559 87-94 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T81755 362-369 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T67317 459-466 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T65504 592-599 http://identifiers.org/rapdb.locus/Os02g0215200 denotes OsHDAC2
T46961 601-608 http://identifiers.org/rapdb.locus/Os02g0214900 denotes OsHDAC3
T46329 632-637 http://identifiers.org/rapdb.locus/Os06g0583400 denotes HDAC1
T78784 722-729 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T96564 843-850 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T6300 931-938 http://identifiers.org/rapdb.locus/Os02g0215200 denotes OsHDAC2
T91100 1136-1143 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T62277 1189-1196 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T60639 1369-1376 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T82923 1422-1424 http://identifiers.org/rapdb.locus/Os10g0539500 denotes H4
T15307 1422-1424 http://identifiers.org/rapdb.locus/Os09g0553100 denotes H4
T81549 1422-1424 http://identifiers.org/rapdb.locus/Os07g0549900 denotes H4
T79738 1569-1576 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1
T28223 1849-1856 http://identifiers.org/rapdb.locus/Os06g0583400 denotes OsHDAC1

OryzaGP

Id Subject Object Predicate Lexical cue
T1 459-466 gene denotes OsHDAC1
T2 592-599 gene denotes OsHDAC2
T3 601-608 gene denotes OsHDAC3
T4 1136-1143 gene denotes OsHDAC1
T5 1569-1576 gene denotes OsHDAC1
T6 1849-1856 gene denotes OsHDAC1

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-86 Sentence denotes Structure and expression of the rice class-I type histone deacetylase genes OsHDAC1-3:
T2 87-187 Sentence denotes OsHDAC1 overexpression in transgenic plants leads to increased growth rate and altered architecture.
T3 188-264 Sentence denotes Histone deacetylases (HDACs) modulate chromatin structure and transcription.
T4 265-340 Sentence denotes HDACs have been studied as negative regulators in eukaryotic transcription.
T5 341-454 Sentence denotes We isolated the rice OsHDAC1-3 genes for class I-type histone deacetylases, which are related to the RPD3 family.
T6 455-661 Sentence denotes The OsHDAC1 gene encoded a protein of approximately 57 kDa that shared 73.5, 72.7, 79.9, and 57.1% amino acid sequence identity with the OsHDAC2, OsHDAC3, maize RPD3, and human HDAC1 proteins, respectively.
T7 662-842 Sentence denotes Genomic structures and Southern blot analyses revealed that OsHDAC1-3 contained seven, six, and seven exons, respectively, and constituted a class I-type family in the rice genome.
T8 843-1053 Sentence denotes OsHDAC1 was expressed at similar levels in the leaves, roots, and callus cells, whereas OsHDAC2 and 3 were expressed in the roots and callus cells, but not in the leaves, exhibiting distinct tissue specificity.
T9 1054-1289 Sentence denotes To explore the role of histone deacetylases in transgenic plants, we inserted the OsHDAC1 cDNA fragment into the expression vector Ai::OsHDAC1 under the control of the ABA-inducible promoter Ai, and transformed the construct into rice.
T10 1290-1390 Sentence denotes Levels of mRNA, protein, and HDAC activity were significantly increased in Ai::OsHDAC1 callus cells.
T11 1391-1711 Sentence denotes The amount of tetra-acetylated H4 in the transgenic cells was greatly reduced, and the reduction was abolished upon treatment with trichostatin A. These results demonstrate that OsHDAC1 overexpression in transgenic cells both yields enzymatically active HDAC complexes and induces changes in histone acetylation in vivo.
T12 1712-1917 Sentence denotes The overexpression leads to a range of novel phenotypes, involving increased growth rate and altered plant architecture, suggesting that OsHDAC1 functions in the genome-wide programming of gene expression.